RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 MINDY2Q8NBR6 621 aa15.96■□□□□ 0.15
PNKP-211ENST00000598020 ARPC1AQ92747 370 aa15.96■□□□□ 0.15
PNKP-211ENST00000598020 C7orf50Q9BRJ6 194 aaKnown RBP15.96■□□□□ 0.15
PNKP-211ENST00000598020 ZNF430Q9H8G1 570 aaPredicted RBP15.96■□□□□ 0.15
PNKP-211ENST00000598020 TRAV41A0A0B4J266 112 aa15.95■□□□□ 0.14
PNKP-211ENST00000598020 IGHG4P01861 327 aa15.95■□□□□ 0.14
PNKP-211ENST00000598020 RPA2P15927 270 aa15.95■□□□□ 0.14
PNKP-211ENST00000598020 CD40LGP29965 261 aa15.95■□□□□ 0.14
PNKP-211ENST00000598020 TMEM267Q0VDI3 215 aaPredicted RBP15.95■□□□□ 0.14
PNKP-211ENST00000598020 AKIRIN2Q53H80 203 aa15.95■□□□□ 0.14
PNKP-211ENST00000598020 OR4A47Q6IF82 309 aa15.95■□□□□ 0.14
PNKP-211ENST00000598020 TEX38Q6PEX7 206 aa15.95■□□□□ 0.14
PNKP-211ENST00000598020 RNF152Q8N8N0 203 aa15.95■□□□□ 0.14
PNKP-211ENST00000598020 R3HDM4Q96D70 268 aa15.95■□□□□ 0.14
PNKP-211ENST00000598020 SLC25A21Q9BQT8 299 aaPredicted RBP15.95■□□□□ 0.14
PNKP-211ENST00000598020 TET2Q6N021 2002 aaPredicted RBP15.95■□□□□ 0.14
PNKP-211ENST00000598020 C3orf85A0A1B0GTC6 90 aa15.94■□□□□ 0.14
PNKP-211ENST00000598020 G3V318 75 aa15.94■□□□□ 0.14
PNKP-211ENST00000598020 CNIH1O95406 144 aa15.94■□□□□ 0.14
PNKP-211ENST00000598020 ELANEP08246 267 aa15.94■□□□□ 0.14
PNKP-211ENST00000598020 MAS1LP35410 378 aa15.94■□□□□ 0.14
PNKP-211ENST00000598020 FOXE3Q13461 319 aa15.94■□□□□ 0.14
PNKP-211ENST00000598020 C11orf44Q8N8P7 122 aa15.94■□□□□ 0.14
PNKP-211ENST00000598020 TMEM68Q96MH6 324 aa15.94■□□□□ 0.14
PNKP-211ENST00000598020 CITED2Q99967 270 aaPredicted RBP15.94■□□□□ 0.14
PNKP-211ENST00000598020 VSIG4Q9Y279 399 aa15.94■□□□□ 0.14
PNKP-211ENST00000598020 WSB1Q9Y6I7 421 aa15.94■□□□□ 0.14
PNKP-211ENST00000598020 MARCH11A6NNE9 402 aa15.93■□□□□ 0.14
PNKP-211ENST00000598020 ERVK-16P61578 105 aa15.93■□□□□ 0.14
PNKP-211ENST00000598020 SSX9Q7RTT3 188 aa15.93■□□□□ 0.14
PNKP-211ENST00000598020 NDUFA11Q86Y39 141 aa15.93■□□□□ 0.14
PNKP-211ENST00000598020 TP53RKQ96S44 253 aa15.93■□□□□ 0.14
PNKP-211ENST00000598020 WDR12Q9GZL7 423 aaKnown RBP15.93■□□□□ 0.14
PNKP-211ENST00000598020 TMEM140Q9NV12 185 aa15.93■□□□□ 0.14
PNKP-211ENST00000598020 CRYM-AS1A6NIL9 109 aa15.92■□□□□ 0.14
PNKP-211ENST00000598020 CENPXA8MT69 81 aa15.92■□□□□ 0.14
PNKP-211ENST00000598020 UPK2O00526 184 aa15.92■□□□□ 0.14
PNKP-211ENST00000598020 ACTL6BO94805 426 aa15.92■□□□□ 0.14
PNKP-211ENST00000598020 IGKV1-39P01597 117 aa15.92■□□□□ 0.14
PNKP-211ENST00000598020 IGLV1-40P01703 118 aa15.92■□□□□ 0.14
PNKP-211ENST00000598020 OPN1MWP04001 364 aa15.92■□□□□ 0.14
PNKP-211ENST00000598020 IGKV1D-39P04432 117 aa15.92■□□□□ 0.14
PNKP-211ENST00000598020 SERPINE2P07093 398 aa15.92■□□□□ 0.14
PNKP-211ENST00000598020 OPN1MW2P0DN77 364 aa15.92■□□□□ 0.14
PNKP-211ENST00000598020 OPN1MW3P0DN78 364 aa15.92■□□□□ 0.14
PNKP-211ENST00000598020 UCP1P25874 307 aa15.92■□□□□ 0.14
PNKP-211ENST00000598020 GNB1P62873 340 aa15.92■□□□□ 0.14
PNKP-211ENST00000598020 RPL8P62917 257 aaKnown RBP15.92■□□□□ 0.14
PNKP-211ENST00000598020 ZNF846Q147U1 533 aa15.92■□□□□ 0.14
PNKP-211ENST00000598020 TNXAQ16473 311 aa15.92■□□□□ 0.14
PNKP-211ENST00000598020 LFNGQ8NES3 379 aa15.92■□□□□ 0.14
PNKP-211ENST00000598020 DMBX1Q8NFW5 382 aa15.92■□□□□ 0.14
PNKP-211ENST00000598020 ABHD5Q8WTS1 349 aa15.92■□□□□ 0.14
PNKP-211ENST00000598020 FAM103A1Q9BTL3 118 aaKnown RBP15.92■□□□□ 0.14
PNKP-211ENST00000598020 NAA60Q9H7X0 242 aa15.92■□□□□ 0.14
PNKP-211ENST00000598020 ADARB2-AS1A8MUL3 147 aa15.91■□□□□ 0.14
PNKP-211ENST00000598020 KRASP01116 189 aa15.91■□□□□ 0.14
PNKP-211ENST00000598020 PSMB8P28062 276 aa15.91■□□□□ 0.14
PNKP-211ENST00000598020 RBMS2Q15434 407 aaKnown RBP15.91■□□□□ 0.14
PNKP-211ENST00000598020 ECSCRQ19T08 205 aa15.91■□□□□ 0.14
PNKP-211ENST00000598020 UNQ5815/PRO19632Q6UWF5 114 aa15.91■□□□□ 0.14
PNKP-211ENST00000598020 GRPEL2Q8TAA5 225 aa15.91■□□□□ 0.14
PNKP-211ENST00000598020 SRSF12Q8WXF0 261 aaKnown RBP15.91■□□□□ 0.14
PNKP-211ENST00000598020 TMEM230Q96A57 120 aa15.91■□□□□ 0.14
PNKP-211ENST00000598020 GALNT14Q96FL9 552 aa15.91■□□□□ 0.14
PNKP-211ENST00000598020 SEC22AQ96IW7 307 aa15.91■□□□□ 0.14
PNKP-211ENST00000598020 ZFP57Q9NU63 452 aa15.91■□□□□ 0.14
PNKP-211ENST00000598020 FOXA2Q9Y261 457 aaPredicted RBP15.91■□□□□ 0.14
PNKP-211ENST00000598020 TSSC4Q9Y5U2 329 aaPredicted RBP15.91■□□□□ 0.14
PNKP-211ENST00000598020 WNK1Q9H4A3 2382 aa15.91■□□□□ 0.14
PNKP-211ENST00000598020 TEX13DA0A0J9YY54 714 aaPredicted RBP15.9■□□□□ 0.14
PNKP-211ENST00000598020 TCRBV4S1A1TA0A5B7 111 aa15.9■□□□□ 0.14
PNKP-211ENST00000598020 M0QZ24 198 aa15.9■□□□□ 0.14
PNKP-211ENST00000598020 PLA2G10O15496 165 aa15.9■□□□□ 0.14
PNKP-211ENST00000598020 HLA-GP17693 338 aa15.9■□□□□ 0.14
PNKP-211ENST00000598020 G6PCP35575 357 aa15.9■□□□□ 0.14
PNKP-211ENST00000598020 DHODHQ02127 395 aa15.9■□□□□ 0.14
PNKP-211ENST00000598020 CXorf66Q5JRM2 361 aaPredicted RBP15.9■□□□□ 0.14
PNKP-211ENST00000598020 ADAD2Q8NCV1 583 aaKnown RBP15.9■□□□□ 0.14
PNKP-211ENST00000598020 OR5M8Q8NGP6 311 aa15.9■□□□□ 0.14
PNKP-211ENST00000598020 GLYATL2Q8WU03 294 aa15.9■□□□□ 0.14
PNKP-211ENST00000598020 SPIN2AQ99865 258 aa15.9■□□□□ 0.14
PNKP-211ENST00000598020 SPIN2BQ9BPZ2 258 aa15.9■□□□□ 0.14
PNKP-211ENST00000598020 TMEM222Q9H0R3 208 aa15.9■□□□□ 0.14
PNKP-211ENST00000598020 MSGN1A6NI15 193 aa15.89■□□□□ 0.13
PNKP-211ENST00000598020 SOX15O60248 233 aa15.89■□□□□ 0.13
PNKP-211ENST00000598020 ATG12O94817 140 aa15.89■□□□□ 0.13
PNKP-211ENST00000598020 CDS2O95674 445 aa15.89■□□□□ 0.13
PNKP-211ENST00000598020 BTCP35070 178 aa15.89■□□□□ 0.13
PNKP-211ENST00000598020 C2orf68Q2NKX9 166 aa15.89■□□□□ 0.13
PNKP-211ENST00000598020 ASPHD1Q5U4P2 390 aa15.89■□□□□ 0.13
PNKP-211ENST00000598020 SGPP2Q8IWX5 399 aa15.89■□□□□ 0.13
PNKP-211ENST00000598020 MYOZ3Q8TDC0 251 aa15.89■□□□□ 0.13
PNKP-211ENST00000598020 KCNIP3Q9Y2W7 256 aa15.89■□□□□ 0.13
PNKP-211ENST00000598020 TRAV3A0A0B4J244 114 aa15.88■□□□□ 0.13
PNKP-211ENST00000598020 LINC00854A0A1B0GVQ3 168 aa15.88■□□□□ 0.13
PNKP-211ENST00000598020 A0A1W2PN81 502 aa15.88■□□□□ 0.13
PNKP-211ENST00000598020 NDUFB6O95139 128 aa15.88■□□□□ 0.13
PNKP-211ENST00000598020 BRI3O95415 125 aa15.88■□□□□ 0.13
PNKP-211ENST00000598020 OR5AC1P0C628 307 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms