RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 LGALS9O00182 355 aa12.86□□□□□ -0.35
PNKP-210ENST00000597965 GGCTO75223 188 aaKnown RBP12.86□□□□□ -0.35
PNKP-210ENST00000597965 DHFRP00374 187 aa12.86□□□□□ -0.35
PNKP-210ENST00000597965 KIR2DS2P43631 304 aa12.86□□□□□ -0.35
PNKP-210ENST00000597965 CLDN12P56749 244 aa12.86□□□□□ -0.35
PNKP-210ENST00000597965 DEFA5Q01523 94 aa12.86□□□□□ -0.35
PNKP-210ENST00000597965 DEFB114Q30KQ6 69 aa12.86□□□□□ -0.35
PNKP-210ENST00000597965 C15orf32Q32M92 178 aa12.86□□□□□ -0.35
PNKP-210ENST00000597965 Q6ZS49 121 aa12.86□□□□□ -0.35
PNKP-210ENST00000597965 OR10R2Q8NGX6 335 aa12.86□□□□□ -0.35
PNKP-210ENST00000597965 VSTM2AQ8TAG5 236 aa12.86□□□□□ -0.35
PNKP-210ENST00000597965 BORCS5Q969J3 196 aa12.86□□□□□ -0.35
PNKP-210ENST00000597965 C6orf62Q9GZU0 229 aaPredicted RBP12.86□□□□□ -0.35
PNKP-210ENST00000597965 SRD5A3Q9H8P0 318 aa12.86□□□□□ -0.35
PNKP-210ENST00000597965 ZNF257Q9Y2Q1 563 aa12.86□□□□□ -0.35
PNKP-210ENST00000597965 KCNK7Q9Y2U2 307 aa12.86□□□□□ -0.35
PNKP-210ENST00000597965 TRAV1-2A0A0B4J238 106 aa12.85□□□□□ -0.35
PNKP-210ENST00000597965 TMEM272A0A1B0GTI8 110 aa12.85□□□□□ -0.35
PNKP-210ENST00000597965 CTDSP2O14595 271 aa12.85□□□□□ -0.35
PNKP-210ENST00000597965 CTXN2P0C2S0 81 aa12.85□□□□□ -0.35
PNKP-210ENST00000597965 GUCA2BQ16661 112 aa12.85□□□□□ -0.35
PNKP-210ENST00000597965 ANKRD55Q3KP44 614 aa12.85□□□□□ -0.35
PNKP-210ENST00000597965 IDO2Q6ZQW0 420 aa12.85□□□□□ -0.35
PNKP-210ENST00000597965 TPRA1Q86W33 373 aa12.85□□□□□ -0.35
PNKP-210ENST00000597965 WDR12Q9GZL7 423 aaKnown RBP12.85□□□□□ -0.35
PNKP-210ENST00000597965 ZNF430Q9H8G1 570 aaPredicted RBP12.85□□□□□ -0.35
PNKP-210ENST00000597965 ZC4H2Q9NQZ6 224 aa12.85□□□□□ -0.35
PNKP-210ENST00000597965 EPPK1P58107 5090 aaKnown RBP12.85□□□□□ -0.35
PNKP-210ENST00000597965 ZNF785A8K8V0 405 aa12.84□□□□□ -0.35
PNKP-210ENST00000597965 J3QRK9 145 aa12.84□□□□□ -0.35
PNKP-210ENST00000597965 GNB3P16520 340 aa12.84□□□□□ -0.35
PNKP-210ENST00000597965 RAB6AP20340 208 aa12.84□□□□□ -0.35
PNKP-210ENST00000597965 ARFRP1Q13795 201 aa12.84□□□□□ -0.35
PNKP-210ENST00000597965 MRGPRG-AS1Q2M3A8 158 aa12.84□□□□□ -0.35
PNKP-210ENST00000597965 CROCCP3Q8IVE0 287 aa12.84□□□□□ -0.35
PNKP-210ENST00000597965 H1FOOQ8IZA3 346 aaPredicted RBP12.84□□□□□ -0.35
PNKP-210ENST00000597965 DEFB125Q8N687 156 aa12.84□□□□□ -0.35
PNKP-210ENST00000597965 ZNF645Q8N7E2 425 aa12.84□□□□□ -0.35
PNKP-210ENST00000597965 FAM110AQ9BQ89 295 aa12.84□□□□□ -0.35
PNKP-210ENST00000597965 RETNQ9HD89 108 aa12.84□□□□□ -0.35
PNKP-210ENST00000597965 SMIM30A4D0T7 59 aa12.83□□□□□ -0.36
PNKP-210ENST00000597965 C2orf70A6NJV1 201 aa12.83□□□□□ -0.36
PNKP-210ENST00000597965 MFNGO00587 321 aa12.83□□□□□ -0.36
PNKP-210ENST00000597965 RBMXL2O75526 392 aaKnown RBP12.83□□□□□ -0.36
PNKP-210ENST00000597965 CD7P09564 240 aa12.83□□□□□ -0.36
PNKP-210ENST00000597965 SAA1P0DJI8 122 aaPredicted RBP12.83□□□□□ -0.36
PNKP-210ENST00000597965 FOLR2P14207 255 aa12.83□□□□□ -0.36
PNKP-210ENST00000597965 HIST1H1DP16402 221 aaKnown RBP12.83□□□□□ -0.36
PNKP-210ENST00000597965 MYL9P24844 172 aa12.83□□□□□ -0.36
PNKP-210ENST00000597965 S100A5P33763 92 aa12.83□□□□□ -0.36
PNKP-210ENST00000597965 MAS1LP35410 378 aa12.83□□□□□ -0.36
PNKP-210ENST00000597965 ETV6P41212 452 aa12.83□□□□□ -0.36
PNKP-210ENST00000597965 ZNF45Q02386 682 aa12.83□□□□□ -0.36
PNKP-210ENST00000597965 FAM106AQ4KMX7 169 aa12.83□□□□□ -0.36
PNKP-210ENST00000597965 HES5Q5TA89 166 aa12.83□□□□□ -0.36
PNKP-210ENST00000597965 KCTD9Q7L273 389 aa12.83□□□□□ -0.36
PNKP-210ENST00000597965 CCDC190Q86UF4 302 aa12.83□□□□□ -0.36
PNKP-210ENST00000597965 NR2C2APQ86WQ0 139 aa12.83□□□□□ -0.36
PNKP-210ENST00000597965 GPHB5Q86YW7 130 aa12.83□□□□□ -0.36
PNKP-210ENST00000597965 RBMY1BA6NDE4 496 aaKnown RBP12.82□□□□□ -0.36
PNKP-210ENST00000597965 RBMY1EA6NEQ0 496 aaKnown RBP12.82□□□□□ -0.36
PNKP-210ENST00000597965 LINC00473A8K010 186 aa12.82□□□□□ -0.36
PNKP-210ENST00000597965 NPIPB5A8MRT5 1133 aa12.82□□□□□ -0.36
PNKP-210ENST00000597965 FCGR3BO75015 233 aa12.82□□□□□ -0.36
PNKP-210ENST00000597965 OR2J3O76001 311 aa12.82□□□□□ -0.36
PNKP-210ENST00000597965 PRH1P02810 166 aa12.82□□□□□ -0.36
PNKP-210ENST00000597965 RBMY1DP0C7P1 496 aaKnown RBP12.82□□□□□ -0.36
PNKP-210ENST00000597965 DTYMKP23919 212 aa12.82□□□□□ -0.36
PNKP-210ENST00000597965 TNFSF8P32971 234 aa12.82□□□□□ -0.36
PNKP-210ENST00000597965 OR4A47Q6IF82 309 aa12.82□□□□□ -0.36
PNKP-210ENST00000597965 AP3S1Q92572 193 aa12.82□□□□□ -0.36
PNKP-210ENST00000597965 C5orf30Q96GV9 206 aa12.82□□□□□ -0.36
PNKP-210ENST00000597965 AIFM2Q9BRQ8 373 aa12.82□□□□□ -0.36
PNKP-210ENST00000597965 MIXL1Q9H2W2 232 aa12.82□□□□□ -0.36
PNKP-210ENST00000597965 IFITM5A6NNB3 132 aa12.81□□□□□ -0.36
PNKP-210ENST00000597965 RAB27BO00194 218 aa12.81□□□□□ -0.36
PNKP-210ENST00000597965 HIST1H1BP16401 226 aaKnown RBP12.81□□□□□ -0.36
PNKP-210ENST00000597965 CBLN1P23435 193 aa12.81□□□□□ -0.36
PNKP-210ENST00000597965 PPP5CP53041 499 aa12.81□□□□□ -0.36
PNKP-210ENST00000597965 ZNF57Q68EA5 555 aaPredicted RBP12.81□□□□□ -0.36
PNKP-210ENST00000597965 OR4S2Q8NH73 311 aa12.81□□□□□ -0.36
PNKP-210ENST00000597965 OR2A7Q96R45 310 aa12.81□□□□□ -0.36
PNKP-210ENST00000597965 HSD17B10Q99714 261 aaKnown RBP12.81□□□□□ -0.36
PNKP-210ENST00000597965 FBXL7Q9UJT9 491 aa12.81□□□□□ -0.36
PNKP-210ENST00000597965 OR2W1Q9Y3N9 320 aa12.81□□□□□ -0.36
PNKP-210ENST00000597965 PPP5D1E7EU14 171 aa12.8□□□□□ -0.36
PNKP-210ENST00000597965 RAB3BP20337 219 aa12.8□□□□□ -0.36
PNKP-210ENST00000597965 ARL3P36405 182 aa12.8□□□□□ -0.36
PNKP-210ENST00000597965 OR10A3P58181 314 aa12.8□□□□□ -0.36
PNKP-210ENST00000597965 OR52B4Q8NGK2 314 aa12.8□□□□□ -0.36
PNKP-210ENST00000597965 MAFIPQ8WZ33 124 aa12.8□□□□□ -0.36
PNKP-210ENST00000597965 EEF1AKMT3Q96AZ1 226 aa12.8□□□□□ -0.36
PNKP-210ENST00000597965 SLC2A9Q9NRM0 540 aa12.8□□□□□ -0.36
PNKP-210ENST00000597965 SCGNO76038 276 aa12.79□□□□□ -0.36
PNKP-210ENST00000597965 KBTBD11O94819 623 aa12.79□□□□□ -0.36
PNKP-210ENST00000597965 OR2C1O95371 312 aa12.79□□□□□ -0.36
PNKP-210ENST00000597965 HRASP01112 189 aa12.79□□□□□ -0.36
PNKP-210ENST00000597965 HLA-DQB1P01920 261 aa12.79□□□□□ -0.36
PNKP-210ENST00000597965 RPL27AP46776 148 aaKnown RBP12.79□□□□□ -0.36
PNKP-210ENST00000597965 MZT2AQ6P582 158 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms