RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 SLC2A9Q9NRM0 540 aa7.41□□□□□ -1.22
LIG1-209ENST00000596104 V9GY05 133 aa7.41□□□□□ -1.22
LIG1-209ENST00000596104 SPRY2O43597 315 aa7.4□□□□□ -1.22
LIG1-209ENST00000596104 DEDDO75618 318 aa7.4□□□□□ -1.22
LIG1-209ENST00000596104 KBTBD11O94819 623 aa7.4□□□□□ -1.22
LIG1-209ENST00000596104 CTRB1P17538 263 aa7.4□□□□□ -1.22
LIG1-209ENST00000596104 CALRP27797 417 aaKnown RBP7.4□□□□□ -1.22
LIG1-209ENST00000596104 PSMB6P28072 239 aa7.4□□□□□ -1.22
LIG1-209ENST00000596104 MAP2K4P45985 399 aa7.4□□□□□ -1.22
LIG1-209ENST00000596104 BRWD1-AS2P59051 145 aa7.4□□□□□ -1.22
LIG1-209ENST00000596104 FABP5Q01469 135 aa7.4□□□□□ -1.22
LIG1-209ENST00000596104 EIF4EBP1Q13541 118 aaPredicted RBP7.4□□□□□ -1.22
LIG1-209ENST00000596104 ARFRP1Q13795 201 aa7.4□□□□□ -1.22
LIG1-209ENST00000596104 TRAM1Q15629 374 aa7.4□□□□□ -1.22
LIG1-209ENST00000596104 DEFB135Q30KP9 77 aa7.4□□□□□ -1.22
LIG1-209ENST00000596104 OR2B11Q5JQS5 317 aa7.4□□□□□ -1.22
LIG1-209ENST00000596104 HES5Q5TA89 166 aa7.4□□□□□ -1.22
LIG1-209ENST00000596104 CTRB2Q6GPI1 263 aa7.4□□□□□ -1.22
LIG1-209ENST00000596104 ZNF645Q8N7E2 425 aa7.4□□□□□ -1.22
LIG1-209ENST00000596104 MARC2Q969Z3 335 aa7.4□□□□□ -1.22
LIG1-209ENST00000596104 EEF1AKMT3Q96AZ1 226 aa7.4□□□□□ -1.22
LIG1-209ENST00000596104 OR2A7Q96R45 310 aa7.4□□□□□ -1.22
LIG1-209ENST00000596104 DCUN1D5Q9BTE7 237 aa7.4□□□□□ -1.22
LIG1-209ENST00000596104 CENPOQ9BU64 300 aa7.4□□□□□ -1.22
LIG1-209ENST00000596104 KLK5Q9Y337 293 aaPredicted RBP7.4□□□□□ -1.22
LIG1-209ENST00000596104 RBMX2Q9Y388 322 aaKnown RBP7.4□□□□□ -1.22
LIG1-209ENST00000596104 PRELID3BQ9Y3B1 194 aa7.4□□□□□ -1.22
LIG1-209ENST00000596104 KMT2AQ03164 3969 aa7.39□□□□□ -1.23
LIG1-209ENST00000596104 IGLV11-55A0A075B6I3 123 aa7.39□□□□□ -1.23
LIG1-209ENST00000596104 A0A075B6Q4 140 aa7.39□□□□□ -1.23
LIG1-209ENST00000596104 IGKV1D-13A0A0B4J2D9 117 aa7.39□□□□□ -1.23
LIG1-209ENST00000596104 DPPA5A6NC42 116 aa7.39□□□□□ -1.23
LIG1-209ENST00000596104 MFSD2BA6NFX1 497 aa7.39□□□□□ -1.23
LIG1-209ENST00000596104 CGB1A6NKQ9 187 aa7.39□□□□□ -1.23
LIG1-209ENST00000596104 J3QRK9 145 aa7.39□□□□□ -1.23
LIG1-209ENST00000596104 HLA-DQB1P01920 261 aa7.39□□□□□ -1.23
LIG1-209ENST00000596104 IGKV1-13P0DP09 117 aa7.39□□□□□ -1.23
LIG1-209ENST00000596104 GALP22466 123 aa7.39□□□□□ -1.23
LIG1-209ENST00000596104 DTYMKP23919 212 aa7.39□□□□□ -1.23
LIG1-209ENST00000596104 GADD45AP24522 165 aa7.39□□□□□ -1.23
LIG1-209ENST00000596104 PSMA1P25786 263 aaKnown RBP7.39□□□□□ -1.23
LIG1-209ENST00000596104 MAS1LP35410 378 aa7.39□□□□□ -1.23
LIG1-209ENST00000596104 RANBP1P43487 201 aa7.39□□□□□ -1.23
LIG1-209ENST00000596104 PSMD7P51665 324 aa7.39□□□□□ -1.23
LIG1-209ENST00000596104 APOC4P55056 127 aa7.39□□□□□ -1.23
LIG1-209ENST00000596104 OGFRL1Q5TC84 451 aaPredicted RBP7.39□□□□□ -1.23
LIG1-209ENST00000596104 OR1L6Q8NGR2 347 aa7.39□□□□□ -1.23
LIG1-209ENST00000596104 OR4S2Q8NH73 311 aa7.39□□□□□ -1.23
LIG1-209ENST00000596104 VSTM2AQ8TAG5 236 aa7.39□□□□□ -1.23
LIG1-209ENST00000596104 ELF5Q9UKW6 265 aaPredicted RBP7.39□□□□□ -1.23
LIG1-209ENST00000596104 MRPS7Q9Y2R9 242 aaKnown RBP7.39□□□□□ -1.23
LIG1-209ENST00000596104 OR2W1Q9Y3N9 320 aa7.39□□□□□ -1.23
LIG1-209ENST00000596104 DNAH10Q8IVF4 4471 aa7.38□□□□□ -1.23
LIG1-209ENST00000596104 TRBV7-1A0A0A6YYK4 115 aa7.38□□□□□ -1.23
LIG1-209ENST00000596104 KIR2DL5BA0A0G2JN68 375 aa7.38□□□□□ -1.23
LIG1-209ENST00000596104 KIR2DL5BA0A0G2JPC4 375 aa7.38□□□□□ -1.23
LIG1-209ENST00000596104 UBE2CO00762 179 aa7.38□□□□□ -1.23
LIG1-209ENST00000596104 CASQ2O14958 399 aaPredicted RBP7.38□□□□□ -1.23
LIG1-209ENST00000596104 DHFRP00374 187 aa7.38□□□□□ -1.23
LIG1-209ENST00000596104 CLEC3BP05452 202 aa7.38□□□□□ -1.23
LIG1-209ENST00000596104 HSMCR30P0CW71 290 aa7.38□□□□□ -1.23
LIG1-209ENST00000596104 MYOD1P15172 320 aa7.38□□□□□ -1.23
LIG1-209ENST00000596104 HIST1H1BP16401 226 aaKnown RBP7.38□□□□□ -1.23
LIG1-209ENST00000596104 CD36P16671 472 aa7.38□□□□□ -1.23
LIG1-209ENST00000596104 RAB6AP20340 208 aa7.38□□□□□ -1.23
LIG1-209ENST00000596104 NFYAP23511 347 aaPredicted RBP7.38□□□□□ -1.23
LIG1-209ENST00000596104 TALDO1P37837 337 aa7.38□□□□□ -1.23
LIG1-209ENST00000596104 ELLP55199 621 aaPredicted RBP7.38□□□□□ -1.23
LIG1-209ENST00000596104 OR10A3P58181 314 aa7.38□□□□□ -1.23
LIG1-209ENST00000596104 MLLT11Q13015 90 aaPredicted RBP7.38□□□□□ -1.23
LIG1-209ENST00000596104 RCN1Q15293 331 aa7.38□□□□□ -1.23
LIG1-209ENST00000596104 ODF3L2Q3SX64 289 aa7.38□□□□□ -1.23
LIG1-209ENST00000596104 ZNF585BQ52M93 769 aa7.38□□□□□ -1.23
LIG1-209ENST00000596104 LGALS9CQ6DKI2 356 aa7.38□□□□□ -1.23
LIG1-209ENST00000596104 RBPMS2Q6ZRY4 209 aaKnown RBP7.38□□□□□ -1.23
LIG1-209ENST00000596104 KIR2DL5AQ8N109 375 aa7.38□□□□□ -1.23
LIG1-209ENST00000596104 OR2C3Q8N628 320 aa7.38□□□□□ -1.23
LIG1-209ENST00000596104 KIR2DL5BQ8NHK3 375 aa7.38□□□□□ -1.23
LIG1-209ENST00000596104 ZNF502Q8TBZ5 544 aa7.38□□□□□ -1.23
LIG1-209ENST00000596104 PHLDA1Q8WV24 401 aaPredicted RBP7.38□□□□□ -1.23
LIG1-209ENST00000596104 RNF183Q96D59 192 aa7.38□□□□□ -1.23
LIG1-209ENST00000596104 SPAG8Q99932 426 aaPredicted RBP7.38□□□□□ -1.23
LIG1-209ENST00000596104 DUSP21Q9H596 190 aa7.38□□□□□ -1.23
LIG1-209ENST00000596104 C5orf66Q9H5L9 145 aa7.38□□□□□ -1.23
LIG1-209ENST00000596104 MRPL27Q9P0M9 148 aaKnown RBP7.38□□□□□ -1.23
LIG1-209ENST00000596104 IGHV3-35A0A0C4DH35 117 aa7.37□□□□□ -1.23
LIG1-209ENST00000596104 ERICH4A6NGS2 130 aa7.37□□□□□ -1.23
LIG1-209ENST00000596104 IFITM5A6NNB3 132 aa7.37□□□□□ -1.23
LIG1-209ENST00000596104 TSPAN4O14817 238 aa7.37□□□□□ -1.23
LIG1-209ENST00000596104 SLC22A5O76082 557 aa7.37□□□□□ -1.23
LIG1-209ENST00000596104 S1PR2O95136 353 aa7.37□□□□□ -1.23
LIG1-209ENST00000596104 REG1AP05451 166 aa7.37□□□□□ -1.23
LIG1-209ENST00000596104 CTXN2P0C2S0 81 aa7.37□□□□□ -1.23
LIG1-209ENST00000596104 GPR183P32249 361 aa7.37□□□□□ -1.23
LIG1-209ENST00000596104 RPL8P62917 257 aaKnown RBP7.37□□□□□ -1.23
LIG1-209ENST00000596104 SSX1Q16384 188 aa7.37□□□□□ -1.23
LIG1-209ENST00000596104 TCTEX1D2Q8WW35 142 aa7.37□□□□□ -1.23
LIG1-209ENST00000596104 TMEM190Q8WZ59 177 aa7.37□□□□□ -1.23
LIG1-209ENST00000596104 CXorf58Q96LI9 332 aa7.37□□□□□ -1.23
LIG1-209ENST00000596104 HSD17B10Q99714 261 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms