RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 CD40LGP29965 261 aa10.32□□□□□ -0.76
SHKBP1-208ENST00000595726 DUTP33316 252 aaKnown RBP10.32□□□□□ -0.76
SHKBP1-208ENST00000595726 VBP1P61758 197 aa10.32□□□□□ -0.76
SHKBP1-208ENST00000595726 TAGLNQ01995 201 aaKnown RBP10.32□□□□□ -0.76
SHKBP1-208ENST00000595726 AKIRIN2Q53H80 203 aa10.32□□□□□ -0.76
SHKBP1-208ENST00000595726 BVESQ8NE79 360 aa10.32□□□□□ -0.76
SHKBP1-208ENST00000595726 BEST4Q8NFU0 473 aa10.32□□□□□ -0.76
SHKBP1-208ENST00000595726 HARBI1Q96MB7 349 aa10.32□□□□□ -0.76
SHKBP1-208ENST00000595726 SLA2Q9H6Q3 261 aa10.32□□□□□ -0.76
SHKBP1-208ENST00000595726 SLC2A8Q9NY64 477 aa10.32□□□□□ -0.76
SHKBP1-208ENST00000595726 SELENOKQ9Y6D0 94 aa10.32□□□□□ -0.76
SHKBP1-208ENST00000595726 IGKV1D-13A0A0B4J2D9 117 aa10.31□□□□□ -0.76
SHKBP1-208ENST00000595726 XRCC3O43542 346 aa10.31□□□□□ -0.76
SHKBP1-208ENST00000595726 TUSC2O75896 110 aa10.31□□□□□ -0.76
SHKBP1-208ENST00000595726 IGLV2-14P01704 120 aa10.31□□□□□ -0.76
SHKBP1-208ENST00000595726 IGKV1-13P0DP09 117 aa10.31□□□□□ -0.76
SHKBP1-208ENST00000595726 MED14OSP0DP75 135 aa10.31□□□□□ -0.76
SHKBP1-208ENST00000595726 ARPC4P59998 168 aa10.31□□□□□ -0.76
SHKBP1-208ENST00000595726 SSBP2P81877 361 aaPredicted RBP10.31□□□□□ -0.76
SHKBP1-208ENST00000595726 CBX3Q13185 183 aa10.31□□□□□ -0.76
SHKBP1-208ENST00000595726 RTL8BQ17RB0 113 aa10.31□□□□□ -0.76
SHKBP1-208ENST00000595726 TMEM177Q53S58 311 aa10.31□□□□□ -0.76
SHKBP1-208ENST00000595726 ZNF562Q6V9R5 426 aa10.31□□□□□ -0.76
SHKBP1-208ENST00000595726 HOGA1Q86XE5 327 aa10.31□□□□□ -0.76
SHKBP1-208ENST00000595726 SAMD12Q8N8I0 201 aa10.31□□□□□ -0.76
SHKBP1-208ENST00000595726 OR5T1Q8NG75 326 aa10.31□□□□□ -0.76
SHKBP1-208ENST00000595726 ADTRPQ96IZ2 230 aa10.31□□□□□ -0.76
SHKBP1-208ENST00000595726 CRYGBP07316 175 aa10.3□□□□□ -0.76
SHKBP1-208ENST00000595726 RRASP10301 218 aa10.3□□□□□ -0.76
SHKBP1-208ENST00000595726 LGALS7P47929 136 aa10.3□□□□□ -0.76
SHKBP1-208ENST00000595726 GUCA2BQ16661 112 aa10.3□□□□□ -0.76
SHKBP1-208ENST00000595726 LYG2Q86SG7 212 aa10.3□□□□□ -0.76
SHKBP1-208ENST00000595726 SNAPC3Q92966 411 aa10.3□□□□□ -0.76
SHKBP1-208ENST00000595726 KCTD12Q96CX2 325 aaKnown RBP10.3□□□□□ -0.76
SHKBP1-208ENST00000595726 S100A16Q96FQ6 103 aaKnown RBP10.3□□□□□ -0.76
SHKBP1-208ENST00000595726 RBMX2Q9Y388 322 aaKnown RBP10.3□□□□□ -0.76
SHKBP1-208ENST00000595726 HSPG2P98160 4391 aa10.3□□□□□ -0.76
SHKBP1-208ENST00000595726 MEIS3P1A6NDR6 274 aa10.29□□□□□ -0.76
SHKBP1-208ENST00000595726 SRRM4A7MD48 611 aaKnown RBP10.29□□□□□ -0.76
SHKBP1-208ENST00000595726 SHOXO15266 292 aa10.29□□□□□ -0.76
SHKBP1-208ENST00000595726 SLC22A5O76082 557 aa10.29□□□□□ -0.76
SHKBP1-208ENST00000595726 GABARAPO95166 117 aa10.29□□□□□ -0.76
SHKBP1-208ENST00000595726 CRYZL1O95825 349 aa10.29□□□□□ -0.76
SHKBP1-208ENST00000595726 FCER2P06734 321 aa10.29□□□□□ -0.76
SHKBP1-208ENST00000595726 EDN2P20800 178 aa10.29□□□□□ -0.76
SHKBP1-208ENST00000595726 CBX5P45973 191 aa10.29□□□□□ -0.76
SHKBP1-208ENST00000595726 TAS2R20P59543 309 aa10.29□□□□□ -0.76
SHKBP1-208ENST00000595726 PJVKQ0ZLH3 352 aa10.29□□□□□ -0.76
SHKBP1-208ENST00000595726 TATDN3Q17R31 274 aa10.29□□□□□ -0.76
SHKBP1-208ENST00000595726 TMEM69Q5SWH9 247 aa10.29□□□□□ -0.76
SHKBP1-208ENST00000595726 KCTD9Q7L273 389 aa10.29□□□□□ -0.76
SHKBP1-208ENST00000595726 PHLDA1Q8WV24 401 aaPredicted RBP10.29□□□□□ -0.76
SHKBP1-208ENST00000595726 NAA50Q9GZZ1 169 aaKnown RBP10.29□□□□□ -0.76
SHKBP1-208ENST00000595726 PEF1Q9UBV8 284 aaKnown RBP10.29□□□□□ -0.76
SHKBP1-208ENST00000595726 EIF4EP06730 217 aaKnown RBP10.28□□□□□ -0.76
SHKBP1-208ENST00000595726 RPL30P62888 115 aaKnown RBP10.28□□□□□ -0.76
SHKBP1-208ENST00000595726 TNFRSF9Q07011 255 aa10.28□□□□□ -0.76
SHKBP1-208ENST00000595726 EIF4EBP1Q13541 118 aaPredicted RBP10.28□□□□□ -0.76
SHKBP1-208ENST00000595726 FXYD3Q14802 87 aa10.28□□□□□ -0.76
SHKBP1-208ENST00000595726 CTF1Q16619 201 aa10.28□□□□□ -0.76
SHKBP1-208ENST00000595726 MRGPRG-AS1Q2M3A8 158 aa10.28□□□□□ -0.76
SHKBP1-208ENST00000595726 POC5Q8NA72 575 aa10.28□□□□□ -0.76
SHKBP1-208ENST00000595726 OR5AP2Q8NGF4 316 aa10.28□□□□□ -0.76
SHKBP1-208ENST00000595726 OR2K2Q8NGT1 345 aa10.28□□□□□ -0.76
SHKBP1-208ENST00000595726 GRPEL2Q8TAA5 225 aa10.28□□□□□ -0.76
SHKBP1-208ENST00000595726 OSR1Q8TAX0 266 aaPredicted RBP10.28□□□□□ -0.76
SHKBP1-208ENST00000595726 WDR89Q96FK6 387 aaPredicted RBP10.28□□□□□ -0.76
SHKBP1-208ENST00000595726 MRPS26Q9BYN8 205 aaKnown RBP10.28□□□□□ -0.76
SHKBP1-208ENST00000595726 ANAPC10Q9UM13 185 aa10.28□□□□□ -0.76
SHKBP1-208ENST00000595726 A0A0G2JLM5 398 aa10.27□□□□□ -0.77
SHKBP1-208ENST00000595726 FCGR3BO75015 233 aa10.27□□□□□ -0.77
SHKBP1-208ENST00000595726 PPYP01298 95 aa10.27□□□□□ -0.77
SHKBP1-208ENST00000595726 AADACP22760 399 aa10.27□□□□□ -0.77
SHKBP1-208ENST00000595726 FCGR2CP31995 323 aa10.27□□□□□ -0.77
SHKBP1-208ENST00000595726 UBE2KP61086 200 aa10.27□□□□□ -0.77
SHKBP1-208ENST00000595726 RPEL1Q2QD12 228 aa10.27□□□□□ -0.77
SHKBP1-208ENST00000595726 DEFB114Q30KQ6 69 aa10.27□□□□□ -0.77
SHKBP1-208ENST00000595726 VMA21Q3ZAQ7 101 aa10.27□□□□□ -0.77
SHKBP1-208ENST00000595726 OR2B11Q5JQS5 317 aa10.27□□□□□ -0.77
SHKBP1-208ENST00000595726 IDO2Q6ZQW0 420 aa10.27□□□□□ -0.77
SHKBP1-208ENST00000595726 LAX1Q8IWV1 398 aa10.27□□□□□ -0.77
SHKBP1-208ENST00000595726 GGTLC1Q9BX51 225 aa10.27□□□□□ -0.77
SHKBP1-208ENST00000595726 IFT46Q9NQC8 304 aa10.27□□□□□ -0.77
SHKBP1-208ENST00000595726 COMMD3Q9UBI1 195 aa10.27□□□□□ -0.77
SHKBP1-208ENST00000595726 PRELID3BQ9Y3B1 194 aa10.27□□□□□ -0.77
SHKBP1-208ENST00000595726 A0A1B0GVY2 172 aa10.26□□□□□ -0.77
SHKBP1-208ENST00000595726 RBMXL2O75526 392 aaKnown RBP10.26□□□□□ -0.77
SHKBP1-208ENST00000595726 APOA1P02647 267 aa10.26□□□□□ -0.77
SHKBP1-208ENST00000595726 SAA1P0DJI8 122 aaPredicted RBP10.26□□□□□ -0.77
SHKBP1-208ENST00000595726 CDK10Q15131 360 aa10.26□□□□□ -0.77
SHKBP1-208ENST00000595726 MSMO1Q15800 293 aa10.26□□□□□ -0.77
SHKBP1-208ENST00000595726 GPR107Q5VW38 600 aa10.26□□□□□ -0.77
SHKBP1-208ENST00000595726 ZNF343Q6P1L6 599 aa10.26□□□□□ -0.77
SHKBP1-208ENST00000595726 TEX45Q8NA69 505 aa10.26□□□□□ -0.77
SHKBP1-208ENST00000595726 SECTM1Q8WVN6 248 aa10.26□□□□□ -0.77
SHKBP1-208ENST00000595726 TCTEX1D2Q8WW35 142 aa10.26□□□□□ -0.77
SHKBP1-208ENST00000595726 ACOT12Q8WYK0 555 aa10.26□□□□□ -0.77
SHKBP1-208ENST00000595726 CMTM3Q96MX0 182 aa10.26□□□□□ -0.77
SHKBP1-208ENST00000595726 HSD17B10Q99714 261 aaKnown RBP10.26□□□□□ -0.77
SHKBP1-208ENST00000595726 CCL28Q9NRJ3 127 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms