RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 ZNF585BQ52M93 769 aa10.75□□□□□ -0.69
SHKBP1-207ENST00000595631 LPCAT3Q6P1A2 487 aa10.75□□□□□ -0.69
SHKBP1-207ENST00000595631 ETV3LQ6ZN32 361 aa10.75□□□□□ -0.69
SHKBP1-207ENST00000595631 Q8N402 240 aa10.75□□□□□ -0.69
SHKBP1-207ENST00000595631 POC5Q8NA72 575 aa10.75□□□□□ -0.69
SHKBP1-207ENST00000595631 OR5T1Q8NG75 326 aa10.75□□□□□ -0.69
SHKBP1-207ENST00000595631 OR51S1Q8NGJ8 323 aa10.75□□□□□ -0.69
SHKBP1-207ENST00000595631 TERB2Q8NHR7 220 aa10.75□□□□□ -0.69
SHKBP1-207ENST00000595631 TMEM167AQ8TBQ9 72 aa10.75□□□□□ -0.69
SHKBP1-207ENST00000595631 SRSF12Q8WXF0 261 aaKnown RBP10.75□□□□□ -0.69
SHKBP1-207ENST00000595631 DUX3Q96PT4 197 aa10.75□□□□□ -0.69
SHKBP1-207ENST00000595631 OR2A7Q96R45 310 aa10.75□□□□□ -0.69
SHKBP1-207ENST00000595631 MSGN1A6NI15 193 aa10.74□□□□□ -0.69
SHKBP1-207ENST00000595631 DISC1C4P0D8 188 aa10.74□□□□□ -0.69
SHKBP1-207ENST00000595631 ETV6P41212 452 aa10.74□□□□□ -0.69
SHKBP1-207ENST00000595631 PIGPP57054 158 aa10.74□□□□□ -0.69
SHKBP1-207ENST00000595631 TAS2R31P59538 309 aa10.74□□□□□ -0.69
SHKBP1-207ENST00000595631 DEFA5Q01523 94 aa10.74□□□□□ -0.69
SHKBP1-207ENST00000595631 TMEM267Q0VDI3 215 aaPredicted RBP10.74□□□□□ -0.69
SHKBP1-207ENST00000595631 KLF9Q13886 244 aaPredicted RBP10.74□□□□□ -0.69
SHKBP1-207ENST00000595631 AKIRIN2Q53H80 203 aa10.74□□□□□ -0.69
SHKBP1-207ENST00000595631 SPANXN2Q5MJ10 180 aa10.74□□□□□ -0.69
SHKBP1-207ENST00000595631 ZNF695Q8IW36 515 aa10.74□□□□□ -0.69
SHKBP1-207ENST00000595631 MMD2Q8IY49 270 aa10.74□□□□□ -0.69
SHKBP1-207ENST00000595631 OR4F17Q8NGA8 305 aa10.74□□□□□ -0.69
SHKBP1-207ENST00000595631 MYOZ3Q8TDC0 251 aa10.74□□□□□ -0.69
SHKBP1-207ENST00000595631 MS4A10Q96PG2 267 aa10.74□□□□□ -0.69
SHKBP1-207ENST00000595631 OR4F4Q96R69 305 aa10.74□□□□□ -0.69
SHKBP1-207ENST00000595631 PHB2Q99623 299 aa10.74□□□□□ -0.69
SHKBP1-207ENST00000595631 SRRQ9GZT4 340 aa10.74□□□□□ -0.69
SHKBP1-207ENST00000595631 GNB4Q9HAV0 340 aa10.74□□□□□ -0.69
SHKBP1-207ENST00000595631 PLEKHA2Q9HB19 425 aa10.74□□□□□ -0.69
SHKBP1-207ENST00000595631 HRASLSQ9HDD0 168 aa10.74□□□□□ -0.69
SHKBP1-207ENST00000595631 ZFP57Q9NU63 452 aa10.74□□□□□ -0.69
SHKBP1-207ENST00000595631 A0A1B0GW64 132 aa10.73□□□□□ -0.69
SHKBP1-207ENST00000595631 E7EUB6 86 aa10.73□□□□□ -0.69
SHKBP1-207ENST00000595631 MPPED1O15442 326 aa10.73□□□□□ -0.69
SHKBP1-207ENST00000595631 NQO2P16083 231 aa10.73□□□□□ -0.69
SHKBP1-207ENST00000595631 PTBP1P26599 531 aaKnown RBP eCLIP10.73□□□□□ -0.69
SHKBP1-207ENST00000595631 G6PCP35575 357 aa10.73□□□□□ -0.69
SHKBP1-207ENST00000595631 RAB9AP51151 201 aa10.73□□□□□ -0.69
SHKBP1-207ENST00000595631 POU2AF1Q16633 256 aa10.73□□□□□ -0.69
SHKBP1-207ENST00000595631 TMEM65Q6PI78 240 aa10.73□□□□□ -0.69
SHKBP1-207ENST00000595631 ZNF491Q8N8L2 437 aa10.73□□□□□ -0.69
SHKBP1-207ENST00000595631 DMBX1Q8NFW5 382 aa10.73□□□□□ -0.69
SHKBP1-207ENST00000595631 VSTM2AQ8TAG5 236 aa10.73□□□□□ -0.69
SHKBP1-207ENST00000595631 CD300LFQ8TDQ1 290 aa10.73□□□□□ -0.69
SHKBP1-207ENST00000595631 OR5B12Q96R08 314 aa10.73□□□□□ -0.69
SHKBP1-207ENST00000595631 SDHCQ99643 169 aaPredicted RBP10.73□□□□□ -0.69
SHKBP1-207ENST00000595631 TMEM140Q9NV12 185 aa10.73□□□□□ -0.69
SHKBP1-207ENST00000595631 MCUBQ9NWR8 336 aa10.73□□□□□ -0.69
SHKBP1-207ENST00000595631 BET1LQ9NYM9 111 aa10.73□□□□□ -0.69
SHKBP1-207ENST00000595631 COMMD9Q9P000 198 aa10.73□□□□□ -0.69
SHKBP1-207ENST00000595631 HMX3A6NHT5 357 aa10.72□□□□□ -0.69
SHKBP1-207ENST00000595631 UPK2O00526 184 aa10.72□□□□□ -0.69
SHKBP1-207ENST00000595631 CREBL2O60519 120 aaPredicted RBP10.72□□□□□ -0.69
SHKBP1-207ENST00000595631 ACTL6BO94805 426 aa10.72□□□□□ -0.69
SHKBP1-207ENST00000595631 KRASP01116 189 aa10.72□□□□□ -0.69
SHKBP1-207ENST00000595631 IGKV1-39P01597 117 aa10.72□□□□□ -0.69
SHKBP1-207ENST00000595631 PF4P02776 101 aa10.72□□□□□ -0.69
SHKBP1-207ENST00000595631 IGKV1D-39P04432 117 aa10.72□□□□□ -0.69
SHKBP1-207ENST00000595631 IL6RP08887 468 aaPredicted RBP10.72□□□□□ -0.69
SHKBP1-207ENST00000595631 S100GP29377 79 aa10.72□□□□□ -0.69
SHKBP1-207ENST00000595631 CDX1P47902 265 aaPredicted RBP10.72□□□□□ -0.69
SHKBP1-207ENST00000595631 RND3P61587 244 aa10.72□□□□□ -0.69
SHKBP1-207ENST00000595631 BAK1Q16611 211 aa10.72□□□□□ -0.69
SHKBP1-207ENST00000595631 CNPY1Q3B7I2 92 aa10.72□□□□□ -0.69
SHKBP1-207ENST00000595631 TCTEX1D1Q8N7M0 179 aa10.72□□□□□ -0.69
SHKBP1-207ENST00000595631 OR5M8Q8NGP6 311 aa10.72□□□□□ -0.69
SHKBP1-207ENST00000595631 ZNF486Q96H40 463 aaPredicted RBP10.72□□□□□ -0.69
SHKBP1-207ENST00000595631 RAX2Q96IS3 184 aa10.72□□□□□ -0.69
SHKBP1-207ENST00000595631 FYTTD1Q96QD9 318 aaKnown RBP10.72□□□□□ -0.69
SHKBP1-207ENST00000595631 TP53RKQ96S44 253 aa10.72□□□□□ -0.69
SHKBP1-207ENST00000595631 ZNF355PQ9NSJ1 428 aa10.72□□□□□ -0.69
SHKBP1-207ENST00000595631 CGB1A6NKQ9 187 aa10.71□□□□□ -0.69
SHKBP1-207ENST00000595631 MARCH11A6NNE9 402 aa10.71□□□□□ -0.69
SHKBP1-207ENST00000595631 TEX22C9J3V5 150 aa10.71□□□□□ -0.69
SHKBP1-207ENST00000595631 CTSDP07339 412 aaPredicted RBP10.71□□□□□ -0.69
SHKBP1-207ENST00000595631 OR9G9P0C7N8 305 aa10.71□□□□□ -0.69
SHKBP1-207ENST00000595631 HLA-GP17693 338 aa10.71□□□□□ -0.69
SHKBP1-207ENST00000595631 RPL27AP46776 148 aaKnown RBP10.71□□□□□ -0.69
SHKBP1-207ENST00000595631 TPPP2P59282 170 aa10.71□□□□□ -0.69
SHKBP1-207ENST00000595631 RPL8P62917 257 aaKnown RBP10.71□□□□□ -0.69
SHKBP1-207ENST00000595631 SP6Q3SY56 376 aa10.71□□□□□ -0.69
SHKBP1-207ENST00000595631 C19orf35Q6ZS72 473 aa10.71□□□□□ -0.69
SHKBP1-207ENST00000595631 C1QL4Q86Z23 238 aa10.71□□□□□ -0.69
SHKBP1-207ENST00000595631 TOMM5Q8N4H5 51 aa10.71□□□□□ -0.69
SHKBP1-207ENST00000595631 ZFAND1Q8TCF1 268 aa10.71□□□□□ -0.69
SHKBP1-207ENST00000595631 PRRT1Q99946 306 aa10.71□□□□□ -0.69
SHKBP1-207ENST00000595631 RTBDNQ9BSG5 229 aaPredicted RBP10.71□□□□□ -0.69
SHKBP1-207ENST00000595631 ALX4Q9H161 411 aaPredicted RBP10.71□□□□□ -0.69
SHKBP1-207ENST00000595631 C5orf66Q9H5L9 145 aa10.71□□□□□ -0.69
SHKBP1-207ENST00000595631 SLC2A8Q9NY64 477 aa10.71□□□□□ -0.69
SHKBP1-207ENST00000595631 COA4Q9NYJ1 87 aa10.71□□□□□ -0.69
SHKBP1-207ENST00000595631 COPZ2Q9P299 210 aa10.71□□□□□ -0.69
SHKBP1-207ENST00000595631 C14orf166Q9Y224 244 aaKnown RBP10.71□□□□□ -0.69
SHKBP1-207ENST00000595631 VSIG4Q9Y279 399 aa10.71□□□□□ -0.69
SHKBP1-207ENST00000595631 NSG2Q9Y328 171 aa10.71□□□□□ -0.69
SHKBP1-207ENST00000595631 NBEAL1Q6ZS30 2694 aa10.71□□□□□ -0.7
SHKBP1-207ENST00000595631 FBN3Q75N90 2809 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms