RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 A0A0U1RQK1 487 aa12.72□□□□□ -0.37
ZNF541-205ENST00000595558 ZNF320A2RRD8 509 aa12.72□□□□□ -0.37
ZNF541-205ENST00000595558 IQCF6A8MYZ5 107 aa12.72□□□□□ -0.37
ZNF541-205ENST00000595558 CD1BP29016 333 aa12.72□□□□□ -0.37
ZNF541-205ENST00000595558 EDDM3AQ14507 147 aa12.72□□□□□ -0.37
ZNF541-205ENST00000595558 USF2Q15853 346 aaPredicted RBP12.72□□□□□ -0.37
ZNF541-205ENST00000595558 MSMPQ1L6U9 139 aa12.72□□□□□ -0.37
ZNF541-205ENST00000595558 UTF1Q5T230 341 aa12.72□□□□□ -0.37
ZNF541-205ENST00000595558 SLC35E4Q6ICL7 350 aa12.72□□□□□ -0.37
ZNF541-205ENST00000595558 LRP11Q86VZ4 500 aa12.72□□□□□ -0.37
ZNF541-205ENST00000595558 WDR31Q8NA23 367 aa12.72□□□□□ -0.37
ZNF541-205ENST00000595558 ZBTB34Q8NCN2 500 aa12.72□□□□□ -0.37
ZNF541-205ENST00000595558 Q8TCH9 128 aa12.72□□□□□ -0.37
ZNF541-205ENST00000595558 ACY3Q96HD9 319 aa12.72□□□□□ -0.37
ZNF541-205ENST00000595558 TRAV3A0A0B4J244 114 aa12.71□□□□□ -0.37
ZNF541-205ENST00000595558 RRHO14718 337 aa12.71□□□□□ -0.37
ZNF541-205ENST00000595558 EREGO14944 169 aa12.71□□□□□ -0.37
ZNF541-205ENST00000595558 TAS2R60P59551 318 aa12.71□□□□□ -0.37
ZNF541-205ENST00000595558 ACP7Q6ZNF0 438 aa12.71□□□□□ -0.37
ZNF541-205ENST00000595558 ARFGEF3Q5TH69 2177 aa12.71□□□□□ -0.37
ZNF541-205ENST00000595558 GCH1P30793 250 aa12.71□□□□□ -0.38
ZNF541-205ENST00000595558 RPL15P61313 204 aaKnown RBP12.71□□□□□ -0.38
ZNF541-205ENST00000595558 WDR82Q6UXN9 313 aa12.71□□□□□ -0.38
ZNF541-205ENST00000595558 C22orf34Q6ZV56 151 aa12.71□□□□□ -0.38
ZNF541-205ENST00000595558 R3HDM4Q96D70 268 aa12.71□□□□□ -0.38
ZNF541-205ENST00000595558 DKK4Q9UBT3 224 aa12.71□□□□□ -0.38
ZNF541-205ENST00000595558 SPTBN4Q9H254 2564 aa12.71□□□□□ -0.38
ZNF541-205ENST00000595558 FCGR3BO75015 233 aa12.7□□□□□ -0.38
ZNF541-205ENST00000595558 TYMSP04818 313 aa12.7□□□□□ -0.38
ZNF541-205ENST00000595558 CECR9P0C854 216 aa12.7□□□□□ -0.38
ZNF541-205ENST00000595558 SRP14P37108 136 aaKnown RBP12.7□□□□□ -0.38
ZNF541-205ENST00000595558 CNN1P51911 297 aaKnown RBP12.7□□□□□ -0.38
ZNF541-205ENST00000595558 MRPL49Q13405 166 aaKnown RBP12.7□□□□□ -0.38
ZNF541-205ENST00000595558 ACOT6Q3I5F7 207 aaPredicted RBP12.7□□□□□ -0.38
ZNF541-205ENST00000595558 TEX38Q6PEX7 206 aa12.7□□□□□ -0.38
ZNF541-205ENST00000595558 VHLLQ6RSH7 139 aa12.7□□□□□ -0.38
ZNF541-205ENST00000595558 TGIF2LXQ8IUE1 241 aa12.7□□□□□ -0.38
ZNF541-205ENST00000595558 CISD2Q8N5K1 135 aaKnown RBP12.7□□□□□ -0.38
ZNF541-205ENST00000595558 ATG101Q9BSB4 218 aa12.7□□□□□ -0.38
ZNF541-205ENST00000595558 DUSP13Q9UII6 198 aa12.7□□□□□ -0.38
ZNF541-205ENST00000595558 WDR83OSQ9Y284 106 aa12.7□□□□□ -0.38
ZNF541-205ENST00000595558 VENTXO95231 258 aa12.7□□□□□ -0.38
ZNF541-205ENST00000595558 ARL14EPLP0DKL9 152 aa12.7□□□□□ -0.38
ZNF541-205ENST00000595558 THBS3P49746 956 aa12.7□□□□□ -0.38
ZNF541-205ENST00000595558 PAX5Q02548 391 aa12.7□□□□□ -0.38
ZNF541-205ENST00000595558 FAM201AQ5SY85 155 aa12.7□□□□□ -0.38
ZNF541-205ENST00000595558 MIC13Q5XKP0 118 aa12.7□□□□□ -0.38
ZNF541-205ENST00000595558 ABHD12Q8N2K0 398 aa12.7□□□□□ -0.38
ZNF541-205ENST00000595558 CIB3Q96Q77 187 aaPredicted RBP12.7□□□□□ -0.38
ZNF541-205ENST00000595558 TRAPPC1Q9Y5R8 145 aa12.7□□□□□ -0.38
ZNF541-205ENST00000595558 AQP7O14520 342 aa12.69□□□□□ -0.38
ZNF541-205ENST00000595558 GCGP01275 180 aa12.69□□□□□ -0.38
ZNF541-205ENST00000595558 Q6ZT83 130 aa12.69□□□□□ -0.38
ZNF541-205ENST00000595558 SEM1Q6ZVN7 128 aa12.69□□□□□ -0.38
ZNF541-205ENST00000595558 GBGT1Q8N5D6 347 aa12.69□□□□□ -0.38
ZNF541-205ENST00000595558 NDUFAF3Q9BU61 184 aa12.69□□□□□ -0.38
ZNF541-205ENST00000595558 SCO2A0A1W2PP80 73 aa12.69□□□□□ -0.38
ZNF541-205ENST00000595558 GRIFINA4D1Z8 144 aa12.69□□□□□ -0.38
ZNF541-205ENST00000595558 C17orf112F2Z3M2 114 aa12.69□□□□□ -0.38
ZNF541-205ENST00000595558 SSTP61278 116 aa12.69□□□□□ -0.38
ZNF541-205ENST00000595558 TGFBR3Q03167 851 aa12.69□□□□□ -0.38
ZNF541-205ENST00000595558 RPL39P5Q59GN2 51 aa12.69□□□□□ -0.38
ZNF541-205ENST00000595558 TREML4Q6UXN2 200 aa12.69□□□□□ -0.38
ZNF541-205ENST00000595558 TMEM144Q7Z5S9 345 aa12.69□□□□□ -0.38
ZNF541-205ENST00000595558 CD177Q8N6Q3 437 aa12.69□□□□□ -0.38
ZNF541-205ENST00000595558 SGMS2Q8NHU3 365 aa12.69□□□□□ -0.38
ZNF541-205ENST00000595558 TMEM18Q96B42 140 aa12.69□□□□□ -0.38
ZNF541-205ENST00000595558 PTPRBP23467 1997 aa12.68□□□□□ -0.38
ZNF541-205ENST00000595558 HCFC1P51610 2035 aa12.68□□□□□ -0.38
ZNF541-205ENST00000595558 A0A1W2PPV4 95 aa12.68□□□□□ -0.38
ZNF541-205ENST00000595558 FRMD6-AS1P0C7T7 363 aa12.68□□□□□ -0.38
ZNF541-205ENST00000595558 KCNIP4Q6PIL6 250 aa12.68□□□□□ -0.38
ZNF541-205ENST00000595558 SSMEM1Q8WWF3 244 aa12.68□□□□□ -0.38
ZNF541-205ENST00000595558 DIRC2Q96SL1 478 aa12.68□□□□□ -0.38
ZNF541-205ENST00000595558 IMMP2LQ96T52 175 aa12.68□□□□□ -0.38
ZNF541-205ENST00000595558 MGST2Q99735 147 aa12.68□□□□□ -0.38
ZNF541-205ENST00000595558 C2orf88Q9BSF0 95 aa12.68□□□□□ -0.38
ZNF541-205ENST00000595558 MS4A5Q9H3V2 200 aa12.68□□□□□ -0.38
ZNF541-205ENST00000595558 C15orf65H3BRN8 121 aa12.68□□□□□ -0.38
ZNF541-205ENST00000595558 DUTP33316 252 aaKnown RBP12.68□□□□□ -0.38
ZNF541-205ENST00000595558 C1orf229Q6ZS94 237 aaPredicted RBP12.68□□□□□ -0.38
ZNF541-205ENST00000595558 C1orf159Q96HA4 380 aa12.68□□□□□ -0.38
ZNF541-205ENST00000595558 CHD8Q9HCK8 2581 aa12.67□□□□□ -0.38
ZNF541-205ENST00000595558 IGHV3OR15-7A0A075B7D8 119 aa12.67□□□□□ -0.38
ZNF541-205ENST00000595558 TMEM210A6NLX4 147 aa12.67□□□□□ -0.38
ZNF541-205ENST00000595558 TIMM8AO60220 97 aaPredicted RBP12.67□□□□□ -0.38
ZNF541-205ENST00000595558 SCGB1D1O95968 90 aa12.67□□□□□ -0.38
ZNF541-205ENST00000595558 ZNF134P52741 427 aa12.67□□□□□ -0.38
ZNF541-205ENST00000595558 SPATA31B1PQ5VZV4 182 aa12.67□□□□□ -0.38
ZNF541-205ENST00000595558 SFRP2Q96HF1 295 aa12.67□□□□□ -0.38
ZNF541-205ENST00000595558 NOL4LQ96MY1 436 aaPredicted RBP12.67□□□□□ -0.38
ZNF541-205ENST00000595558 PXMP4Q9Y6I8 212 aa12.67□□□□□ -0.38
ZNF541-205ENST00000595558 TET2Q6N021 2002 aaPredicted RBP12.67□□□□□ -0.38
ZNF541-205ENST00000595558 J3QW42 95 aa12.67□□□□□ -0.38
ZNF541-205ENST00000595558 TNFSF13O75888 250 aa12.67□□□□□ -0.38
ZNF541-205ENST00000595558 ZNF83P51522 516 aa12.67□□□□□ -0.38
ZNF541-205ENST00000595558 LEAP2Q969E1 77 aa12.67□□□□□ -0.38
ZNF541-205ENST00000595558 HEYLQ9NQ87 328 aaPredicted RBP12.67□□□□□ -0.38
ZNF541-205ENST00000595558 CBLN4Q9NTU7 201 aa12.67□□□□□ -0.38
ZNF541-205ENST00000595558 ELOVL5Q9NYP7 299 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms