RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 MRPL20Q9BYC9 149 aaKnown RBP12.22□□□□□ -0.45
FOXA3-202ENST00000594297 PRSS22Q9GZN4 317 aa12.22□□□□□ -0.45
FOXA3-202ENST00000594297 A6NDX4 124 aa12.21□□□□□ -0.45
FOXA3-202ENST00000594297 VGLL3A8MV65 326 aa12.21□□□□□ -0.45
FOXA3-202ENST00000594297 SSNA1O43805 119 aa12.21□□□□□ -0.45
FOXA3-202ENST00000594297 HRASP01112 189 aa12.21□□□□□ -0.45
FOXA3-202ENST00000594297 OR5AC1P0C628 307 aa12.21□□□□□ -0.45
FOXA3-202ENST00000594297 CD1BP29016 333 aa12.21□□□□□ -0.45
FOXA3-202ENST00000594297 DHRS2Q13268 280 aa12.21□□□□□ -0.45
FOXA3-202ENST00000594297 OR5AN1Q8NGI8 311 aa12.21□□□□□ -0.45
FOXA3-202ENST00000594297 RNASE11Q8TAA1 199 aaKnown RBP12.21□□□□□ -0.45
FOXA3-202ENST00000594297 CAPSLQ8WWF8 208 aa12.21□□□□□ -0.45
FOXA3-202ENST00000594297 TMEM230Q96A57 120 aa12.21□□□□□ -0.45
FOXA3-202ENST00000594297 FLYWCH2Q96CP2 140 aaKnown RBP12.21□□□□□ -0.45
FOXA3-202ENST00000594297 TMEM222Q9H0R3 208 aa12.21□□□□□ -0.45
FOXA3-202ENST00000594297 PROP1O75360 226 aa12.2□□□□□ -0.46
FOXA3-202ENST00000594297 HPRT1P00492 218 aa12.2□□□□□ -0.46
FOXA3-202ENST00000594297 IFNA21P01568 189 aa12.2□□□□□ -0.46
FOXA3-202ENST00000594297 UCP1P25874 307 aa12.2□□□□□ -0.46
FOXA3-202ENST00000594297 LPAR6P43657 344 aa12.2□□□□□ -0.46
FOXA3-202ENST00000594297 ERVK-16P61578 105 aa12.2□□□□□ -0.46
FOXA3-202ENST00000594297 EIF4EBP1Q13541 118 aaPredicted RBP12.2□□□□□ -0.46
FOXA3-202ENST00000594297 HES1Q14469 280 aa12.2□□□□□ -0.46
FOXA3-202ENST00000594297 OR2B11Q5JQS5 317 aa12.2□□□□□ -0.46
FOXA3-202ENST00000594297 C12orf45Q8N5I9 185 aaPredicted RBP12.2□□□□□ -0.46
FOXA3-202ENST00000594297 ZNF383Q8NA42 475 aa12.2□□□□□ -0.46
FOXA3-202ENST00000594297 UXS1Q8NBZ7 420 aa12.2□□□□□ -0.46
FOXA3-202ENST00000594297 OR5AU1Q8NGC0 362 aa12.2□□□□□ -0.46
FOXA3-202ENST00000594297 OSR1Q8TAX0 266 aaPredicted RBP12.2□□□□□ -0.46
FOXA3-202ENST00000594297 IL22RA2Q969J5 263 aa12.2□□□□□ -0.46
FOXA3-202ENST00000594297 RNF5Q99942 180 aa12.2□□□□□ -0.46
FOXA3-202ENST00000594297 PLEKHA2Q9HB19 425 aa12.2□□□□□ -0.46
FOXA3-202ENST00000594297 A0A0B4J2A0 478 aa12.19□□□□□ -0.46
FOXA3-202ENST00000594297 DUXBA0A1W2PPF3 345 aa12.19□□□□□ -0.46
FOXA3-202ENST00000594297 A0A1W2PPI3 338 aa12.19□□□□□ -0.46
FOXA3-202ENST00000594297 LINC00473A8K010 186 aa12.19□□□□□ -0.46
FOXA3-202ENST00000594297 H0YJW9 148 aa12.19□□□□□ -0.46
FOXA3-202ENST00000594297 LGALS7P47929 136 aa12.19□□□□□ -0.46
FOXA3-202ENST00000594297 RPL30P62888 115 aaKnown RBP12.19□□□□□ -0.46
FOXA3-202ENST00000594297 BLCAPP62952 87 aa12.19□□□□□ -0.46
FOXA3-202ENST00000594297 SP6Q3SY56 376 aa12.19□□□□□ -0.46
FOXA3-202ENST00000594297 TCTEX1D4Q5JR98 221 aa12.19□□□□□ -0.46
FOXA3-202ENST00000594297 LIN54Q6MZP7 749 aa12.19□□□□□ -0.46
FOXA3-202ENST00000594297 OR2T10Q8NGZ9 312 aa12.19□□□□□ -0.46
FOXA3-202ENST00000594297 MITD1Q8WV92 249 aa12.19□□□□□ -0.46
FOXA3-202ENST00000594297 DDB2Q92466 427 aa12.19□□□□□ -0.46
FOXA3-202ENST00000594297 RRNAD1Q96FB5 475 aaKnown RBP12.19□□□□□ -0.46
FOXA3-202ENST00000594297 C5orf30Q96GV9 206 aa12.19□□□□□ -0.46
FOXA3-202ENST00000594297 TP53RKQ96S44 253 aa12.19□□□□□ -0.46
FOXA3-202ENST00000594297 GPHA2Q96T91 129 aa12.19□□□□□ -0.46
FOXA3-202ENST00000594297 TSNAXQ99598 290 aaKnown RBP12.19□□□□□ -0.46
FOXA3-202ENST00000594297 SEC22CQ9BRL7 303 aa12.19□□□□□ -0.46
FOXA3-202ENST00000594297 OR51J1Q9H342 316 aa12.19□□□□□ -0.46
FOXA3-202ENST00000594297 COMMD9Q9P000 198 aa12.19□□□□□ -0.46
FOXA3-202ENST00000594297 SHPKQ9UHJ6 478 aa12.19□□□□□ -0.46
FOXA3-202ENST00000594297 U3KQK5 164 aa12.19□□□□□ -0.46
FOXA3-202ENST00000594297 SHOXO15266 292 aa12.18□□□□□ -0.46
FOXA3-202ENST00000594297 CDS2O95674 445 aa12.18□□□□□ -0.46
FOXA3-202ENST00000594297 CRYZL1O95825 349 aa12.18□□□□□ -0.46
FOXA3-202ENST00000594297 MOSP00540 346 aa12.18□□□□□ -0.46
FOXA3-202ENST00000594297 NQO2P16083 231 aa12.18□□□□□ -0.46
FOXA3-202ENST00000594297 DYNLT3P51808 116 aa12.18□□□□□ -0.46
FOXA3-202ENST00000594297 RPS16P62249 146 aaKnown RBP12.18□□□□□ -0.46
FOXA3-202ENST00000594297 SUPT4H1P63272 117 aaKnown RBP12.18□□□□□ -0.46
FOXA3-202ENST00000594297 DIAPH2-AS1Q14236 149 aa12.18□□□□□ -0.46
FOXA3-202ENST00000594297 TMEM187Q14656 261 aa12.18□□□□□ -0.46
FOXA3-202ENST00000594297 TMEM268Q5VZI3 342 aa12.18□□□□□ -0.46
FOXA3-202ENST00000594297 Q6ZNX1 250 aa12.18□□□□□ -0.46
FOXA3-202ENST00000594297 THNSL2Q86YJ6 484 aa12.18□□□□□ -0.46
FOXA3-202ENST00000594297 GLYATL2Q8WU03 294 aa12.18□□□□□ -0.46
FOXA3-202ENST00000594297 RBPMSQ93062 196 aaKnown RBP12.18□□□□□ -0.46
FOXA3-202ENST00000594297 MED28Q9H204 178 aa12.18□□□□□ -0.46
FOXA3-202ENST00000594297 PITPNC1Q9UKF7 332 aa12.18□□□□□ -0.46
FOXA3-202ENST00000594297 ALG5Q9Y673 324 aa12.18□□□□□ -0.46
FOXA3-202ENST00000594297 C7orf66A4D0T2 115 aa12.17□□□□□ -0.46
FOXA3-202ENST00000594297 AKR1C2P52895 323 aa12.17□□□□□ -0.46
FOXA3-202ENST00000594297 LDLRAD2Q5SZI1 272 aa12.17□□□□□ -0.46
FOXA3-202ENST00000594297 LINC00482Q8N8I6 264 aa12.17□□□□□ -0.46
FOXA3-202ENST00000594297 LRTM2Q8N967 370 aa12.17□□□□□ -0.46
FOXA3-202ENST00000594297 DMBX1Q8NFW5 382 aa12.17□□□□□ -0.46
FOXA3-202ENST00000594297 OR52B4Q8NGK2 314 aa12.17□□□□□ -0.46
FOXA3-202ENST00000594297 VSTM2AQ8TAG5 236 aa12.17□□□□□ -0.46
FOXA3-202ENST00000594297 HARBI1Q96MB7 349 aa12.17□□□□□ -0.46
FOXA3-202ENST00000594297 TMEM56Q96MV1 263 aa12.17□□□□□ -0.46
FOXA3-202ENST00000594297 KIAA1456Q9P272 454 aa12.17□□□□□ -0.46
FOXA3-202ENST00000594297 TMED3Q9Y3Q3 217 aa12.17□□□□□ -0.46
FOXA3-202ENST00000594297 TSSC4Q9Y5U2 329 aaPredicted RBP12.17□□□□□ -0.46
FOXA3-202ENST00000594297 TMEM56-RWDD3S4R434 201 aa12.17□□□□□ -0.46
FOXA3-202ENST00000594297 IGHV3-72A0A0B4J1Y9 119 aa12.16□□□□□ -0.46
FOXA3-202ENST00000594297 TCRBV4S1A1TA0A5B7 111 aa12.16□□□□□ -0.46
FOXA3-202ENST00000594297 IGKV1D-33P01593 117 aa12.16□□□□□ -0.46
FOXA3-202ENST00000594297 IGKV1-33P01594 117 aa12.16□□□□□ -0.46
FOXA3-202ENST00000594297 VMA21Q3ZAQ7 101 aa12.16□□□□□ -0.46
FOXA3-202ENST00000594297 TMEM177Q53S58 311 aa12.16□□□□□ -0.46
FOXA3-202ENST00000594297 H2BFWTQ7Z2G1 175 aa12.16□□□□□ -0.46
FOXA3-202ENST00000594297 FAM219AQ8IW50 185 aa12.16□□□□□ -0.46
FOXA3-202ENST00000594297 OR8H1Q8NGG4 311 aa12.16□□□□□ -0.46
FOXA3-202ENST00000594297 DPF1Q92782 380 aa12.16□□□□□ -0.46
FOXA3-202ENST00000594297 SPIN2AQ99865 258 aa12.16□□□□□ -0.46
FOXA3-202ENST00000594297 SPIN2BQ9BPZ2 258 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms