RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 GPR6P46095 362 aaPredicted RBP9.71□□□□□ -0.85
NPC1-214ENST00000593280 PRRX1P54821 245 aa9.71□□□□□ -0.85
NPC1-214ENST00000593280 LRRC75BQ2VPJ9 315 aa9.71□□□□□ -0.85
NPC1-214ENST00000593280 PDPNQ86YL7 162 aa9.71□□□□□ -0.85
NPC1-214ENST00000593280 TGIF2LXQ8IUE1 241 aa9.71□□□□□ -0.85
NPC1-214ENST00000593280 LY6G5BQ8NDX9 201 aa9.71□□□□□ -0.85
NPC1-214ENST00000593280 HARBI1Q96MB7 349 aa9.71□□□□□ -0.85
NPC1-214ENST00000593280 PCGF1Q9BSM1 259 aa9.71□□□□□ -0.85
NPC1-214ENST00000593280 PSMG3Q9BT73 122 aaPredicted RBP9.71□□□□□ -0.85
NPC1-214ENST00000593280 CLEC7AQ9BXN2 247 aa9.71□□□□□ -0.85
NPC1-214ENST00000593280 WDR61Q9GZS3 305 aaKnown RBP9.71□□□□□ -0.85
NPC1-214ENST00000593280 NARFLQ9H6Q4 476 aa9.71□□□□□ -0.85
NPC1-214ENST00000593280 PATZ1Q9HBE1 687 aaKnown RBP9.71□□□□□ -0.85
NPC1-214ENST00000593280 HEYLQ9NQ87 328 aaPredicted RBP9.71□□□□□ -0.85
NPC1-214ENST00000593280 ONECUT1Q9UBC0 465 aa9.71□□□□□ -0.85
NPC1-214ENST00000593280 TET2Q6N021 2002 aaPredicted RBP9.71□□□□□ -0.86
NPC1-214ENST00000593280 C15orf62A8K5M9 175 aa9.71□□□□□ -0.86
NPC1-214ENST00000593280 PMS2P5A8MQ11 134 aa9.71□□□□□ -0.86
NPC1-214ENST00000593280 C22orf46C9J442 243 aa9.71□□□□□ -0.86
NPC1-214ENST00000593280 UPK2O00526 184 aa9.71□□□□□ -0.86
NPC1-214ENST00000593280 AGPAT2O15120 278 aa9.71□□□□□ -0.86
NPC1-214ENST00000593280 GOSR1O95249 250 aa9.71□□□□□ -0.86
NPC1-214ENST00000593280 IFNA10P01566 189 aa9.71□□□□□ -0.86
NPC1-214ENST00000593280 VDAC2P45880 294 aaPredicted RBP9.71□□□□□ -0.86
NPC1-214ENST00000593280 RAB13P51153 203 aa9.71□□□□□ -0.86
NPC1-214ENST00000593280 EFNA4P52798 201 aa9.71□□□□□ -0.86
NPC1-214ENST00000593280 DIAPH2-AS1Q14236 149 aa9.71□□□□□ -0.86
NPC1-214ENST00000593280 TMEM177Q53S58 311 aa9.71□□□□□ -0.86
NPC1-214ENST00000593280 DPPA3Q6W0C5 159 aa9.71□□□□□ -0.86
NPC1-214ENST00000593280 COMMD1Q8N668 190 aa9.71□□□□□ -0.86
NPC1-214ENST00000593280 FLYWCH2Q96CP2 140 aaKnown RBP9.71□□□□□ -0.86
NPC1-214ENST00000593280 RSG1Q9BU20 258 aa9.71□□□□□ -0.86
NPC1-214ENST00000593280 SSBP3Q9BWW4 388 aaPredicted RBP9.71□□□□□ -0.86
NPC1-214ENST00000593280 TREM1Q9NP99 234 aa9.71□□□□□ -0.86
NPC1-214ENST00000593280 ENY2Q9NPA8 101 aa9.71□□□□□ -0.86
NPC1-214ENST00000593280 UQCC1Q9NVA1 299 aa9.71□□□□□ -0.86
NPC1-214ENST00000593280 BET1LQ9NYM9 111 aa9.71□□□□□ -0.86
NPC1-214ENST00000593280 WASHC3Q9Y3C0 194 aa9.71□□□□□ -0.86
NPC1-214ENST00000593280 FBXO7Q9Y3I1 522 aa9.71□□□□□ -0.86
NPC1-214ENST00000593280 OR51B2Q9Y5P1 312 aa9.71□□□□□ -0.86
NPC1-214ENST00000593280 DOCK11Q5JSL3 2073 aa9.7□□□□□ -0.86
NPC1-214ENST00000593280 SRRM4A7MD48 611 aaKnown RBP9.7□□□□□ -0.86
NPC1-214ENST00000593280 IL6RP08887 468 aaPredicted RBP9.7□□□□□ -0.86
NPC1-214ENST00000593280 SAA1P0DJI8 122 aaPredicted RBP9.7□□□□□ -0.86
NPC1-214ENST00000593280 HSPE1P61604 102 aaKnown RBP9.7□□□□□ -0.86
NPC1-214ENST00000593280 RPS16P62249 146 aaKnown RBP9.7□□□□□ -0.86
NPC1-214ENST00000593280 AKR1C1Q04828 323 aa9.7□□□□□ -0.86
NPC1-214ENST00000593280 TUSC1Q2TAM9 212 aa9.7□□□□□ -0.86
NPC1-214ENST00000593280 HLA-DRB5Q30154 266 aa9.7□□□□□ -0.86
NPC1-214ENST00000593280 PUSL1Q8N0Z8 303 aaKnown RBP9.7□□□□□ -0.86
NPC1-214ENST00000593280 BEND2Q8NDZ0 799 aa9.7□□□□□ -0.86
NPC1-214ENST00000593280 OR4C13Q8NGP0 309 aa9.7□□□□□ -0.86
NPC1-214ENST00000593280 TAF15Q92804 592 aaKnown RBP eCLIP9.7□□□□□ -0.86
NPC1-214ENST00000593280 LHX4Q969G2 390 aa9.7□□□□□ -0.86
NPC1-214ENST00000593280 RBMXL1Q96E39 390 aaKnown RBP9.7□□□□□ -0.86
NPC1-214ENST00000593280 ZNF257Q9Y2Q1 563 aa9.7□□□□□ -0.86
NPC1-214ENST00000593280 AMMECR1Q9Y4X0 333 aaPredicted RBP9.7□□□□□ -0.86
NPC1-214ENST00000593280 LOC105371242A0A075B767 164 aa9.69□□□□□ -0.86
NPC1-214ENST00000593280 TMEM218A2RU14 115 aa9.69□□□□□ -0.86
NPC1-214ENST00000593280 NDUFS7O75251 213 aa9.69□□□□□ -0.86
NPC1-214ENST00000593280 KBTBD11O94819 623 aa9.69□□□□□ -0.86
NPC1-214ENST00000593280 IGLV1-47P01700 117 aa9.69□□□□□ -0.86
NPC1-214ENST00000593280 COX7A1P24310 79 aa9.69□□□□□ -0.86
NPC1-214ENST00000593280 MC5RP33032 325 aa9.69□□□□□ -0.86
NPC1-214ENST00000593280 DLX1P56177 255 aa9.69□□□□□ -0.86
NPC1-214ENST00000593280 SRSF3P84103 164 aaKnown RBP9.69□□□□□ -0.86
NPC1-214ENST00000593280 VWC2Q2TAL6 325 aa9.69□□□□□ -0.86
NPC1-214ENST00000593280 LFNGQ8NES3 379 aa9.69□□□□□ -0.86
NPC1-214ENST00000593280 TMEM231Q9H6L2 316 aa9.69□□□□□ -0.86
NPC1-214ENST00000593280 FKBP11Q9NYL4 201 aa9.69□□□□□ -0.86
NPC1-214ENST00000593280 FAM96BQ9Y3D0 163 aa9.69□□□□□ -0.86
NPC1-214ENST00000593280 GCN1Q92616 2671 aaKnown RBP9.69□□□□□ -0.86
NPC1-214ENST00000593280 SPTBN1Q01082 2364 aaKnown RBP9.68□□□□□ -0.86
NPC1-214ENST00000593280 PRB1P04280 392 aa9.68□□□□□ -0.86
NPC1-214ENST00000593280 FGF7P21781 194 aa9.68□□□□□ -0.86
NPC1-214ENST00000593280 SNCAP37840 140 aa9.68□□□□□ -0.86
NPC1-214ENST00000593280 RAB11AP62491 216 aa9.68□□□□□ -0.86
NPC1-214ENST00000593280 SERF2P84101 59 aa9.68□□□□□ -0.86
NPC1-214ENST00000593280 TLE4Q04727 773 aa9.68□□□□□ -0.86
NPC1-214ENST00000593280 OR4A5Q8NH83 315 aa9.68□□□□□ -0.86
NPC1-214ENST00000593280 VSTM2AQ8TAG5 236 aa9.68□□□□□ -0.86
NPC1-214ENST00000593280 HINT2Q9BX68 163 aa9.68□□□□□ -0.86
NPC1-214ENST00000593280 MS4A7Q9GZW8 240 aaPredicted RBP9.68□□□□□ -0.86
NPC1-214ENST00000593280 PLEKHA3Q9HB20 300 aa9.68□□□□□ -0.86
NPC1-214ENST00000593280 TIMM9Q9Y5J7 89 aa9.68□□□□□ -0.86
NPC1-214ENST00000593280 ABCA4P78363 2273 aa9.68□□□□□ -0.86
NPC1-214ENST00000593280 FLNCQ14315 2725 aa9.68□□□□□ -0.86
NPC1-214ENST00000593280 RNASEK-C17orf49H0YIS7 233 aa9.67□□□□□ -0.86
NPC1-214ENST00000593280 BUB1B-PAK6H3BSN5 160 aa9.67□□□□□ -0.86
NPC1-214ENST00000593280 M0R1W7 72 aa9.67□□□□□ -0.86
NPC1-214ENST00000593280 SCO1O75880 301 aa9.67□□□□□ -0.86
NPC1-214ENST00000593280 APOC3P02656 99 aa9.67□□□□□ -0.86
NPC1-214ENST00000593280 H2AFB1P0C5Y9 115 aa9.67□□□□□ -0.86
NPC1-214ENST00000593280 MYOD1P15172 320 aa9.67□□□□□ -0.86
NPC1-214ENST00000593280 DVL1P1P54792 670 aaPredicted RBP9.67□□□□□ -0.86
NPC1-214ENST00000593280 PRCDQ00LT1 54 aa9.67□□□□□ -0.86
NPC1-214ENST00000593280 PRB3Q04118 309 aaPredicted RBP9.67□□□□□ -0.86
NPC1-214ENST00000593280 ETV3LQ6ZN32 361 aa9.67□□□□□ -0.86
NPC1-214ENST00000593280 PNKDQ8N490 385 aa9.67□□□□□ -0.86
NPC1-214ENST00000593280 SLC24A4Q8NFF2 622 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms