RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 H2BFSP57053 126 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 ZNF616Q08AN1 781 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 PMAIP1Q13794 54 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 GRK1Q15835 563 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 CNIH2Q6PI25 160 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 FA2HQ7L5A8 372 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 NAA40Q86UY6 237 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 ZNF567Q8N184 647 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 FAM24BQ8N5W8 94 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 ZNF283Q8N7M2 679 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 ST6GALNAC3Q8NDV1 305 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 OR52L1Q8NGH7 329 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 OR10G4Q8NGN3 311 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 OR13C4Q8NGS5 318 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 PPTC7Q8NI37 304 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 RXFP2Q8WXD0 754 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 VSIG2Q96IQ7 327 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 PDFQ9HBH1 243 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 SH2D2AQ9NP31 389 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 MMP26Q9NRE1 261 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 UBQLN4Q9NRR5 601 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 RSL24D1Q9UHA3 163 aaKnown RBP3.48□□□□□ -1.85
SMAD4-216ENST00000593223 PRNDQ9UKY0 176 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 ST3GAL6Q9Y274 331 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 UBIAD1Q9Y5Z9 338 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 V9GY05 133 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 THADAQ6YHU6 1953 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 SDK2Q58EX2 2172 aa3.48□□□□□ -1.85
SMAD4-216ENST00000593223 TACC2O95359 2948 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 TMX2-CTNND1H3BSU7 103 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 H7C1H1 209 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 K7ERU9 68 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 SLC17A2O00624 439 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 DEGS1O15121 323 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 CHST10O43529 356 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 HCRTR1O43613 425 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 CDRT1O95170 752 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 IGHG2P01859 326 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 C1QBP02746 253 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 CSF3P09919 207 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 ZNF708P17019 499 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 TCN2P20062 427 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 CDK2P24941 298 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 RBMXP38159 391 aaKnown RBP3.47□□□□□ -1.85
SMAD4-216ENST00000593223 REG1BP48304 166 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 RBP2P50120 134 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 RND2P52198 227 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 RUNX1Q01196 453 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 DNLZQ5SXM8 178 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 C1orf194Q5T5A4 169 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 STEAP4Q687X5 459 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 AGTRAPQ6RW13 159 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 DGAT2L6Q6ZPD8 337 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 ZNF571Q7Z3V5 609 aaPredicted RBP3.47□□□□□ -1.85
SMAD4-216ENST00000593223 TGIF2LYQ8IUE0 185 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 OSR2Q8N2R0 312 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 SLC35F6Q8N357 371 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 MUC15Q8N387 334 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 GPR26Q8NDV2 337 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 OR11H6Q8NGC7 330 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 OR9I1Q8NGQ6 314 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 GNPDA2Q8TDQ7 276 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 SLC35G5Q96KT7 338 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 PGLYRP4Q96LB8 373 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 RNF157Q96PX1 679 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 OR2M2Q96R28 347 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 VCXQ9H320 206 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 HES4Q9HCC6 221 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 CALML5Q9NZT1 146 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 MRPL27Q9P0M9 148 aaKnown RBP3.47□□□□□ -1.85
SMAD4-216ENST00000593223 YTHDF2Q9Y5A9 579 aaKnown RBP3.47□□□□□ -1.85
SMAD4-216ENST00000593223 ORC6Q9Y5N6 252 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 KNTC1P50748 2209 aa3.47□□□□□ -1.85
SMAD4-216ENST00000593223 CUBNO60494 3623 aa3.46□□□□□ -1.85
SMAD4-216ENST00000593223 IGSF9BQ9UPX0 1349 aa3.46□□□□□ -1.85
SMAD4-216ENST00000593223 HELZP42694 1942 aaKnown RBP3.46□□□□□ -1.85
SMAD4-216ENST00000593223 ZNF469Q96JG9 3925 aaPredicted RBP3.46□□□□□ -1.86
SMAD4-216ENST00000593223 PI4KAP42356 2102 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 PCDH15Q96QU1 1955 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 A0A096LPI6 279 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 TMEM150BA6NC51 233 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 RBFOX3A6NFN3 312 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 G3V2T6 193 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 UPK2O00526 184 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 MYL12BO14950 172 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 ARL6IP5O75915 188 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 C6orf47O95873 294 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 IGKV1D-16P01601 117 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 OR4A8P0C604 315 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 P0C879 139 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 MPC1LP0DKB6 136 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 SPI1P17947 270 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 DRD3P35462 400 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 CTRLP40313 264 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 CDK5Q00535 292 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 ANKRD22Q5VYY1 191 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 HAGHLQ6PII5 290 aaPredicted RBP3.46□□□□□ -1.86
SMAD4-216ENST00000593223 TMPPEQ6ZT21 453 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 GOLT1AQ6ZVE7 132 aa3.46□□□□□ -1.86
SMAD4-216ENST00000593223 ZNF550Q7Z398 422 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms