RNA–Protein interactions for RNA: ENST00000593099.5

LIG3-216, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 4,664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-216ENST00000593099 OR1L6Q8NGR2 347 aa8.25□□□□□ -1.09
LIG3-216ENST00000593099 ALKBH7Q9BT30 221 aaPredicted RBP8.25□□□□□ -1.09
LIG3-216ENST00000593099 OR51B2Q9Y5P1 312 aa8.25□□□□□ -1.09
LIG3-216ENST00000593099 UBE2L5PA0A1B0GUS4 154 aa8.25□□□□□ -1.09
LIG3-216ENST00000593099 H0Y980 276 aa8.25□□□□□ -1.09
LIG3-216ENST00000593099 TDGF1P3P51864 188 aa8.25□□□□□ -1.09
LIG3-216ENST00000593099 UNQ5815/PRO19632Q6UWF5 114 aa8.25□□□□□ -1.09
LIG3-216ENST00000593099 OR2C3Q8N628 320 aa8.25□□□□□ -1.09
LIG3-216ENST00000593099 OR5R1Q8NH85 324 aa8.25□□□□□ -1.09
LIG3-216ENST00000593099 CHRDL1Q9BU40 450 aa8.25□□□□□ -1.09
LIG3-216ENST00000593099 RSRP1Q9BUV0 290 aa8.25□□□□□ -1.09
LIG3-216ENST00000593099 TLNRD1Q9H1K6 362 aa8.25□□□□□ -1.09
LIG3-216ENST00000593099 WNK2Q9Y3S1 2297 aa8.24□□□□□ -1.09
LIG3-216ENST00000593099 HAX1O00165 279 aa8.24□□□□□ -1.09
LIG3-216ENST00000593099 SLC25A6P12236 298 aa8.24□□□□□ -1.09
LIG3-216ENST00000593099 FA2HQ7L5A8 372 aa8.24□□□□□ -1.09
LIG3-216ENST00000593099 GSN-AS1Q9NRJ2 163 aa8.24□□□□□ -1.09
LIG3-216ENST00000593099 FBLN5Q9UBX5 448 aa8.24□□□□□ -1.09
LIG3-216ENST00000593099 CEP192Q8TEP8 1941 aa8.24□□□□□ -1.09
LIG3-216ENST00000593099 SERTM2A0A1B0GWG4 89 aa8.24□□□□□ -1.09
LIG3-216ENST00000593099 H2AFB1P0C5Y9 115 aa8.24□□□□□ -1.09
LIG3-216ENST00000593099 APELAP0DMC3 54 aa8.24□□□□□ -1.09
LIG3-216ENST00000593099 SPNP16150 400 aa8.24□□□□□ -1.09
LIG3-216ENST00000593099 PSMB3P49720 205 aa8.24□□□□□ -1.09
LIG3-216ENST00000593099 PMS2P11Q13670 270 aa8.24□□□□□ -1.09
LIG3-216ENST00000593099 WDR25Q64LD2 544 aaPredicted RBP8.24□□□□□ -1.09
LIG3-216ENST00000593099 FAM166AQ6J272 317 aa8.24□□□□□ -1.09
LIG3-216ENST00000593099 TMEM182Q6ZP80 229 aaPredicted RBP8.24□□□□□ -1.09
LIG3-216ENST00000593099 LYZL2Q7Z4W2 148 aa8.24□□□□□ -1.09
LIG3-216ENST00000593099 C15orf54Q8N8G6 183 aa8.24□□□□□ -1.09
LIG3-216ENST00000593099 GTF3AQ92664 365 aaKnown RBP8.24□□□□□ -1.09
LIG3-216ENST00000593099 ANAPC13Q9BS18 74 aa8.24□□□□□ -1.09
LIG3-216ENST00000593099 CHST1O43916 411 aa8.24□□□□□ -1.09
LIG3-216ENST00000593099 CD99P14209 185 aa8.24□□□□□ -1.09
LIG3-216ENST00000593099 PLAC9Q5JTB6 97 aa8.24□□□□□ -1.09
LIG3-216ENST00000593099 C11orf87Q6NUJ2 197 aa8.24□□□□□ -1.09
LIG3-216ENST00000593099 DMRTC2Q8IXT2 367 aaPredicted RBP8.24□□□□□ -1.09
LIG3-216ENST00000593099 LFNGQ8NES3 379 aa8.24□□□□□ -1.09
LIG3-216ENST00000593099 PRR13Q9NZ81 148 aa8.24□□□□□ -1.09
LIG3-216ENST00000593099 CEP295Q9C0D2 2601 aa8.24□□□□□ -1.09
LIG3-216ENST00000593099 LDLRAD4O15165 306 aa8.24□□□□□ -1.09
LIG3-216ENST00000593099 NUDT3O95989 172 aa8.24□□□□□ -1.09
LIG3-216ENST00000593099 IGLV1-44P01699 117 aa8.24□□□□□ -1.09
LIG3-216ENST00000593099 NTF4P34130 210 aa8.24□□□□□ -1.09
LIG3-216ENST00000593099 PLPPR1Q8TBJ4 325 aa8.24□□□□□ -1.09
LIG3-216ENST00000593099 SLC2A8Q9NY64 477 aa8.24□□□□□ -1.09
LIG3-216ENST00000593099 FAM24AA6NFZ4 105 aa8.23□□□□□ -1.09
LIG3-216ENST00000593099 PGLYRP1O75594 196 aaPredicted RBP8.23□□□□□ -1.09
LIG3-216ENST00000593099 RPL7L1Q6DKI1 246 aaKnown RBP8.23□□□□□ -1.09
LIG3-216ENST00000593099 COLCA1Q6ZS62 124 aa8.23□□□□□ -1.09
LIG3-216ENST00000593099 OVCH2Q7RTZ1 564 aa8.23□□□□□ -1.09
LIG3-216ENST00000593099 ADAD2Q8NCV1 583 aaKnown RBP8.23□□□□□ -1.09
LIG3-216ENST00000593099 BPESC1Q9GZL8 116 aa8.23□□□□□ -1.09
LIG3-216ENST00000593099 CTDSP1Q9GZU7 261 aa8.23□□□□□ -1.09
LIG3-216ENST00000593099 ELF5Q9UKW6 265 aaPredicted RBP8.23□□□□□ -1.09
LIG3-216ENST00000593099 GPR132Q9UNW8 380 aa8.23□□□□□ -1.09
LIG3-216ENST00000593099 SPTBN4Q9H254 2564 aa8.23□□□□□ -1.09
LIG3-216ENST00000593099 C5orf63A6NC05 138 aa8.23□□□□□ -1.09
LIG3-216ENST00000593099 PLA2G10O15496 165 aa8.23□□□□□ -1.09
LIG3-216ENST00000593099 LY6HO94772 140 aa8.23□□□□□ -1.09
LIG3-216ENST00000593099 COL8A2P25067 703 aa8.23□□□□□ -1.09
LIG3-216ENST00000593099 ZNF525Q8N782 197 aa8.23□□□□□ -1.09
LIG3-216ENST00000593099 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.23□□□□□ -1.09
LIG3-216ENST00000593099 RNF2Q99496 336 aa8.23□□□□□ -1.09
LIG3-216ENST00000593099 TMEM133Q9H2Q1 129 aa8.23□□□□□ -1.09
LIG3-216ENST00000593099 HIF1ANQ9NWT6 349 aa8.23□□□□□ -1.09
LIG3-216ENST00000593099 VSIG4Q9Y279 399 aa8.23□□□□□ -1.09
LIG3-216ENST00000593099 G3V3Q6 166 aa8.23□□□□□ -1.09
LIG3-216ENST00000593099 DNASE2O00115 360 aaPredicted RBP8.23□□□□□ -1.09
LIG3-216ENST00000593099 OR10J1P30954 320 aa8.23□□□□□ -1.09
LIG3-216ENST00000593099 TMEM50BP56557 158 aa8.23□□□□□ -1.09
LIG3-216ENST00000593099 CKS1BP61024 79 aa8.23□□□□□ -1.09
LIG3-216ENST00000593099 TMEM42Q69YG0 159 aa8.23□□□□□ -1.09
LIG3-216ENST00000593099 CENPVQ7Z7K6 275 aaPredicted RBP8.23□□□□□ -1.09
LIG3-216ENST00000593099 FAM24BQ8N5W8 94 aa8.23□□□□□ -1.09
LIG3-216ENST00000593099 Q8WTZ3 238 aa8.23□□□□□ -1.09
LIG3-216ENST00000593099 TMEM231Q9H6L2 316 aa8.23□□□□□ -1.09
LIG3-216ENST00000593099 TIMM9Q9Y5J7 89 aa8.23□□□□□ -1.09
LIG3-216ENST00000593099 OR2A4O95047 310 aa8.23□□□□□ -1.09
LIG3-216ENST00000593099 F12P00748 615 aaPredicted RBP8.23□□□□□ -1.09
LIG3-216ENST00000593099 ADORA2A-AS1P86434 159 aa8.23□□□□□ -1.09
LIG3-216ENST00000593099 LCN15Q6UWW0 184 aa8.23□□□□□ -1.09
LIG3-216ENST00000593099 DRAM1Q8N682 238 aa8.23□□□□□ -1.09
LIG3-216ENST00000593099 OR2A7Q96R45 310 aa8.23□□□□□ -1.09
LIG3-216ENST00000593099 MMP24Q9Y5R2 645 aa8.23□□□□□ -1.09
LIG3-216ENST00000593099 PTPN13Q12923 2485 aa8.22□□□□□ -1.09
LIG3-216ENST00000593099 MLNRO43193 412 aa8.22□□□□□ -1.09
LIG3-216ENST00000593099 MELTFP08582 738 aa8.22□□□□□ -1.09
LIG3-216ENST00000593099 SCGB1A1P11684 91 aa8.22□□□□□ -1.09
LIG3-216ENST00000593099 RPL7P18124 248 aaKnown RBP8.22□□□□□ -1.09
LIG3-216ENST00000593099 PMCHP20382 165 aa8.22□□□□□ -1.09
LIG3-216ENST00000593099 DVL1P1P54792 670 aaPredicted RBP8.22□□□□□ -1.09
LIG3-216ENST00000593099 UCP3P55916 312 aa8.22□□□□□ -1.09
LIG3-216ENST00000593099 EFNB3Q15768 340 aa8.22□□□□□ -1.09
LIG3-216ENST00000593099 TMEM155Q4W5P6 130 aa8.22□□□□□ -1.09
LIG3-216ENST00000593099 FAM162BQ5T6X4 162 aa8.22□□□□□ -1.09
LIG3-216ENST00000593099 PRSS54Q6PEW0 395 aa8.22□□□□□ -1.09
LIG3-216ENST00000593099 MRPL30Q8TCC3 161 aaKnown RBP8.22□□□□□ -1.09
LIG3-216ENST00000593099 NMES1Q9C002 83 aa8.22□□□□□ -1.09
LIG3-216ENST00000593099 TLN1Q9Y490 2541 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms