RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 DEFB108AA8MXU0 73 aa14.93□□□□□ -0.02
SPC24-206ENST00000592540 PRSS46E5RG02 174 aa14.93□□□□□ -0.02
SPC24-206ENST00000592540 CELA3BP08861 270 aa14.93□□□□□ -0.02
SPC24-206ENST00000592540 SSTR5P35346 364 aa14.93□□□□□ -0.02
SPC24-206ENST00000592540 HOXA4Q00056 320 aaPredicted RBP14.93□□□□□ -0.02
SPC24-206ENST00000592540 RPEL1Q2QD12 228 aa14.93□□□□□ -0.02
SPC24-206ENST00000592540 MMD2Q8IY49 270 aa14.93□□□□□ -0.02
SPC24-206ENST00000592540 SIGLECL1Q8N7X8 197 aa14.93□□□□□ -0.02
SPC24-206ENST00000592540 HEYLQ9NQ87 328 aaPredicted RBP14.93□□□□□ -0.02
SPC24-206ENST00000592540 CELSR3Q9NYQ7 3312 aa14.92□□□□□ -0.02
SPC24-206ENST00000592540 C9JCJ5 164 aa14.92□□□□□ -0.02
SPC24-206ENST00000592540 TMPRSS3P57727 454 aa14.92□□□□□ -0.02
SPC24-206ENST00000592540 FOXF2Q12947 444 aa14.92□□□□□ -0.02
SPC24-206ENST00000592540 OR5I1Q13606 314 aa14.92□□□□□ -0.02
SPC24-206ENST00000592540 CT55Q8WUE5 264 aa14.92□□□□□ -0.02
SPC24-206ENST00000592540 TTTY12Q9BZ98 90 aa14.92□□□□□ -0.02
SPC24-206ENST00000592540 TFF1P04155 84 aa14.92□□□□□ -0.02
SPC24-206ENST00000592540 GPX1P07203 203 aa14.92□□□□□ -0.02
SPC24-206ENST00000592540 GABRA6Q16445 453 aa14.92□□□□□ -0.02
SPC24-206ENST00000592540 Q8N976 141 aa14.92□□□□□ -0.02
SPC24-206ENST00000592540 OR4B1Q8NGF8 309 aa14.92□□□□□ -0.02
SPC24-206ENST00000592540 RFESDQ8TAC1 157 aa14.92□□□□□ -0.02
SPC24-206ENST00000592540 C11orf52Q96A22 123 aa14.92□□□□□ -0.02
SPC24-206ENST00000592540 EAF1Q96JC9 268 aaPredicted RBP14.92□□□□□ -0.02
SPC24-206ENST00000592540 FAM103A1Q9BTL3 118 aaKnown RBP14.92□□□□□ -0.02
SPC24-206ENST00000592540 GNB1LQ9BYB4 327 aa14.92□□□□□ -0.02
SPC24-206ENST00000592540 GNB4Q9HAV0 340 aa14.92□□□□□ -0.02
SPC24-206ENST00000592540 MSL2Q9HCI7 577 aa14.92□□□□□ -0.02
SPC24-206ENST00000592540 LY96Q9Y6Y9 160 aa14.92□□□□□ -0.02
SPC24-206ENST00000592540 TRGV10A0A0A0MS01 117 aa14.91□□□□□ -0.02
SPC24-206ENST00000592540 TRBV9A0A0B4J1U6 114 aa14.91□□□□□ -0.02
SPC24-206ENST00000592540 CFIP05156 583 aa14.91□□□□□ -0.02
SPC24-206ENST00000592540 VDAC2P45880 294 aaPredicted RBP14.91□□□□□ -0.02
SPC24-206ENST00000592540 COL5A1-AS1Q5SY13 56 aa14.91□□□□□ -0.02
SPC24-206ENST00000592540 PRAMEF5Q5TYX0 476 aa14.91□□□□□ -0.02
SPC24-206ENST00000592540 PRAMEF6Q5VXH4 476 aa14.91□□□□□ -0.02
SPC24-206ENST00000592540 ZNF826PQ6ZT77 177 aa14.91□□□□□ -0.02
SPC24-206ENST00000592540 CXorf67Q86X51 503 aaPredicted RBP14.91□□□□□ -0.02
SPC24-206ENST00000592540 TPRX1Q8N7U7 411 aa14.91□□□□□ -0.02
SPC24-206ENST00000592540 OR4A16Q8NH70 328 aa14.91□□□□□ -0.02
SPC24-206ENST00000592540 SSMEM1Q8WWF3 244 aa14.91□□□□□ -0.02
SPC24-206ENST00000592540 C1orf159Q96HA4 380 aa14.91□□□□□ -0.02
SPC24-206ENST00000592540 V9GYV3 84 aa14.91□□□□□ -0.02
SPC24-206ENST00000592540 J3QW42 95 aa14.91□□□□□ -0.02
SPC24-206ENST00000592540 FCGR3BO75015 233 aa14.91□□□□□ -0.02
SPC24-206ENST00000592540 TFPI2P48307 235 aa14.91□□□□□ -0.02
SPC24-206ENST00000592540 KRTDAPP60985 99 aa14.91□□□□□ -0.02
SPC24-206ENST00000592540 SPATA31B1PQ5VZV4 182 aa14.91□□□□□ -0.02
SPC24-206ENST00000592540 OR13A1Q8NGR1 328 aa14.91□□□□□ -0.02
SPC24-206ENST00000592540 SLC25A40Q8TBP6 338 aa14.91□□□□□ -0.02
SPC24-206ENST00000592540 SEPSECSQ9HD40 501 aaKnown RBP14.91□□□□□ -0.02
SPC24-206ENST00000592540 ZNF586Q9NXT0 402 aa14.91□□□□□ -0.02
SPC24-206ENST00000592540 FAM90A9PA6NNJ1 464 aa14.9□□□□□ -0.02
SPC24-206ENST00000592540 DIRC3C9JPN6 131 aa14.9□□□□□ -0.02
SPC24-206ENST00000592540 DCAF12Q5T6F0 453 aa14.9□□□□□ -0.02
SPC24-206ENST00000592540 DMRTA1Q5VZB9 504 aa14.9□□□□□ -0.02
SPC24-206ENST00000592540 TIPARPQ7Z3E1 657 aaKnown RBP14.9□□□□□ -0.02
SPC24-206ENST00000592540 OR8I2Q8N0Y5 310 aa14.9□□□□□ -0.02
SPC24-206ENST00000592540 ABHD12Q8N2K0 398 aa14.9□□□□□ -0.02
SPC24-206ENST00000592540 TMEM251Q8N6I4 163 aa14.9□□□□□ -0.02
SPC24-206ENST00000592540 ST6GALNAC3Q8NDV1 305 aa14.9□□□□□ -0.02
SPC24-206ENST00000592540 UHRF2Q96PU4 802 aa14.9□□□□□ -0.02
SPC24-206ENST00000592540 RNF2Q99496 336 aa14.9□□□□□ -0.02
SPC24-206ENST00000592540 SFXN3Q9BWM7 321 aa14.9□□□□□ -0.02
SPC24-206ENST00000592540 LSM4Q9Y4Z0 139 aaKnown RBP14.9□□□□□ -0.02
SPC24-206ENST00000592540 IQCF6A8MYZ5 107 aa14.89□□□□□ -0.03
SPC24-206ENST00000592540 GFRA3O60609 400 aa14.89□□□□□ -0.03
SPC24-206ENST00000592540 DUTP33316 252 aaKnown RBP14.89□□□□□ -0.03
SPC24-206ENST00000592540 HTD2P86397 168 aa14.89□□□□□ -0.03
SPC24-206ENST00000592540 EFNB3Q15768 340 aa14.89□□□□□ -0.03
SPC24-206ENST00000592540 FBXW9Q5XUX1 488 aa14.89□□□□□ -0.03
SPC24-206ENST00000592540 TBL2Q9Y4P3 447 aaKnown RBP14.89□□□□□ -0.03
SPC24-206ENST00000592540 PROP1O75360 226 aa14.89□□□□□ -0.03
SPC24-206ENST00000592540 FOXH1O75593 365 aa14.89□□□□□ -0.03
SPC24-206ENST00000592540 COL8A2P25067 703 aa14.89□□□□□ -0.03
SPC24-206ENST00000592540 CTRLP40313 264 aa14.89□□□□□ -0.03
SPC24-206ENST00000592540 RAB7AP51149 207 aa14.89□□□□□ -0.03
SPC24-206ENST00000592540 RHOBP62745 196 aa14.89□□□□□ -0.03
SPC24-206ENST00000592540 MRPL49Q13405 166 aaKnown RBP14.89□□□□□ -0.03
SPC24-206ENST00000592540 PMS2CLQ68D20 193 aa14.89□□□□□ -0.03
SPC24-206ENST00000592540 C11orf53Q8IXP5 236 aa14.89□□□□□ -0.03
SPC24-206ENST00000592540 OR52E5Q8NH55 327 aa14.89□□□□□ -0.03
SPC24-206ENST00000592540 Q8TCH9 128 aa14.89□□□□□ -0.03
SPC24-206ENST00000592540 NPVFQ9HCQ7 196 aa14.89□□□□□ -0.03
SPC24-206ENST00000592540 ZFP30Q9Y2G7 519 aa14.89□□□□□ -0.03
SPC24-206ENST00000592540 MT-CO2P00403 227 aa14.88□□□□□ -0.03
SPC24-206ENST00000592540 DUSP3P51452 185 aaPredicted RBP14.88□□□□□ -0.03
SPC24-206ENST00000592540 C6orf15Q6UXA7 325 aaPredicted RBP14.88□□□□□ -0.03
SPC24-206ENST00000592540 ACP7Q6ZNF0 438 aa14.88□□□□□ -0.03
SPC24-206ENST00000592540 C1orf174Q8IYL3 243 aa14.88□□□□□ -0.03
SPC24-206ENST00000592540 OBP2BQ9NPH6 170 aa14.88□□□□□ -0.03
SPC24-206ENST00000592540 METRNQ9UJH8 293 aa14.88□□□□□ -0.03
SPC24-206ENST00000592540 ZNF891A8MT65 544 aaPredicted RBP14.88□□□□□ -0.03
SPC24-206ENST00000592540 GPR12P47775 334 aa14.88□□□□□ -0.03
SPC24-206ENST00000592540 SPATA45Q537H7 98 aa14.88□□□□□ -0.03
SPC24-206ENST00000592540 ABHD17BQ5VST6 288 aa14.88□□□□□ -0.03
SPC24-206ENST00000592540 VKORC1L1Q8N0U8 176 aa14.88□□□□□ -0.03
SPC24-206ENST00000592540 NRN1Q9NPD7 142 aa14.88□□□□□ -0.03
SPC24-206ENST00000592540 NAT8BQ9UHF3 227 aa14.88□□□□□ -0.03
SPC24-206ENST00000592540 SLC45A2Q9UMX9 530 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms