RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 CTSDP07339 412 aaPredicted RBP16.7■□□□□ 0.26
ATG4D-212ENST00000590096 EGR2P11161 476 aaPredicted RBP16.7■□□□□ 0.26
ATG4D-212ENST00000590096 LPAR6P43657 344 aa16.7■□□□□ 0.26
ATG4D-212ENST00000590096 ZNF45Q02386 682 aa16.7■□□□□ 0.26
ATG4D-212ENST00000590096 SURF2Q15527 256 aaPredicted RBP16.7■□□□□ 0.26
ATG4D-212ENST00000590096 AKIRIN2Q53H80 203 aa16.7■□□□□ 0.26
ATG4D-212ENST00000590096 TRIQKQ629K1 86 aa16.7■□□□□ 0.26
ATG4D-212ENST00000590096 ZNF57Q68EA5 555 aaPredicted RBP16.7■□□□□ 0.26
ATG4D-212ENST00000590096 LFNGQ8NES3 379 aa16.7■□□□□ 0.26
ATG4D-212ENST00000590096 DMBX1Q8NFW5 382 aa16.7■□□□□ 0.26
ATG4D-212ENST00000590096 TMEM167AQ8TBQ9 72 aa16.7■□□□□ 0.26
ATG4D-212ENST00000590096 DEDD2Q8WXF8 326 aa16.7■□□□□ 0.26
ATG4D-212ENST00000590096 R3HDM4Q96D70 268 aa16.7■□□□□ 0.26
ATG4D-212ENST00000590096 PHB2Q99623 299 aa16.7■□□□□ 0.26
ATG4D-212ENST00000590096 HRASLSQ9HDD0 168 aa16.7■□□□□ 0.26
ATG4D-212ENST00000590096 FAM212BQ9NTI7 297 aaPredicted RBP16.7■□□□□ 0.26
ATG4D-212ENST00000590096 ZFP57Q9NU63 452 aa16.7■□□□□ 0.26
ATG4D-212ENST00000590096 NUBP2Q9Y5Y2 271 aa16.7■□□□□ 0.26
ATG4D-212ENST00000590096 A0A1W2PN81 502 aa16.69■□□□□ 0.26
ATG4D-212ENST00000590096 PPIFP30405 207 aaKnown RBP16.69■□□□□ 0.26
ATG4D-212ENST00000590096 CHRNA7P36544 502 aa16.69■□□□□ 0.26
ATG4D-212ENST00000590096 SSBP2P81877 361 aaPredicted RBP16.69■□□□□ 0.26
ATG4D-212ENST00000590096 POU2AF1Q16633 256 aa16.69■□□□□ 0.26
ATG4D-212ENST00000590096 MRGPRG-AS1Q2M3A8 158 aa16.69■□□□□ 0.26
ATG4D-212ENST00000590096 OR4A47Q6IF82 309 aa16.69■□□□□ 0.26
ATG4D-212ENST00000590096 TMEM65Q6PI78 240 aa16.69■□□□□ 0.26
ATG4D-212ENST00000590096 MINDY2Q8NBR6 621 aa16.69■□□□□ 0.26
ATG4D-212ENST00000590096 OR4A5Q8NH83 315 aa16.69■□□□□ 0.26
ATG4D-212ENST00000590096 MRGPRFQ96AM1 343 aa16.69■□□□□ 0.26
ATG4D-212ENST00000590096 SCGB3A2Q96PL1 93 aa16.69■□□□□ 0.26
ATG4D-212ENST00000590096 BET1LQ9NYM9 111 aa16.69■□□□□ 0.26
ATG4D-212ENST00000590096 FOXA2Q9Y261 457 aaPredicted RBP16.69■□□□□ 0.26
ATG4D-212ENST00000590096 TRRAPQ9Y4A5 3859 aa16.68■□□□□ 0.26
ATG4D-212ENST00000590096 ADARB2-AS1A8MUL3 147 aa16.68■□□□□ 0.26
ATG4D-212ENST00000590096 TSPAN15O95858 294 aa16.68■□□□□ 0.26
ATG4D-212ENST00000590096 RPL23AP62750 156 aaKnown RBP16.68■□□□□ 0.26
ATG4D-212ENST00000590096 ZNF585BQ52M93 769 aa16.68■□□□□ 0.26
ATG4D-212ENST00000590096 OR4F17Q8NGA8 305 aa16.68■□□□□ 0.26
ATG4D-212ENST00000590096 SRSF12Q8WXF0 261 aaKnown RBP16.68■□□□□ 0.26
ATG4D-212ENST00000590096 TMEM68Q96MH6 324 aa16.68■□□□□ 0.26
ATG4D-212ENST00000590096 OR4F4Q96R69 305 aa16.68■□□□□ 0.26
ATG4D-212ENST00000590096 MGAM2Q2M2H8 2515 aa16.68■□□□□ 0.26
ATG4D-212ENST00000590096 TNCP24821 2201 aa16.68■□□□□ 0.26
ATG4D-212ENST00000590096 MARCH11A6NNE9 402 aa16.67■□□□□ 0.26
ATG4D-212ENST00000590096 IGLV1-40P01703 118 aa16.67■□□□□ 0.26
ATG4D-212ENST00000590096 RPLP1P05386 114 aaKnown RBP16.67■□□□□ 0.26
ATG4D-212ENST00000590096 SERPINE2P07093 398 aa16.67■□□□□ 0.26
ATG4D-212ENST00000590096 PF4V1P10720 104 aa16.67■□□□□ 0.26
ATG4D-212ENST00000590096 PSMB8P28062 276 aa16.67■□□□□ 0.26
ATG4D-212ENST00000590096 CD40LGP29965 261 aa16.67■□□□□ 0.26
ATG4D-212ENST00000590096 MAS1LP35410 378 aa16.67■□□□□ 0.26
ATG4D-212ENST00000590096 RPL8P62917 257 aaKnown RBP16.67■□□□□ 0.26
ATG4D-212ENST00000590096 C19orf54Q5BKX5 351 aa16.67■□□□□ 0.26
ATG4D-212ENST00000590096 LINC00299Q6ZSB3 139 aa16.67■□□□□ 0.26
ATG4D-212ENST00000590096 LCNL1Q6ZST4 164 aa16.67■□□□□ 0.26
ATG4D-212ENST00000590096 RNF152Q8N8N0 203 aa16.67■□□□□ 0.26
ATG4D-212ENST00000590096 OR5M8Q8NGP6 311 aa16.67■□□□□ 0.26
ATG4D-212ENST00000590096 TMEM140Q9NV12 185 aa16.67■□□□□ 0.26
ATG4D-212ENST00000590096 PTTG2Q9NZH5 202 aa16.67■□□□□ 0.26
ATG4D-212ENST00000590096 NUDT19A8MXV4 375 aa16.66■□□□□ 0.26
ATG4D-212ENST00000590096 H0Y980 276 aa16.66■□□□□ 0.26
ATG4D-212ENST00000590096 KRASP01116 189 aa16.66■□□□□ 0.26
ATG4D-212ENST00000590096 RPA2P15927 270 aa16.66■□□□□ 0.26
ATG4D-212ENST00000590096 BAK1Q16611 211 aa16.66■□□□□ 0.26
ATG4D-212ENST00000590096 TREML4Q6UXN2 200 aa16.66■□□□□ 0.26
ATG4D-212ENST00000590096 FAM110DQ8TAY7 271 aaPredicted RBP16.66■□□□□ 0.26
ATG4D-212ENST00000590096 GPR132Q9UNW8 380 aa16.66■□□□□ 0.26
ATG4D-212ENST00000590096 C3orf85A0A1B0GTC6 90 aa16.65■□□□□ 0.26
ATG4D-212ENST00000590096 MSGN1A6NI15 193 aa16.65■□□□□ 0.26
ATG4D-212ENST00000590096 G6PCP35575 357 aa16.65■□□□□ 0.26
ATG4D-212ENST00000590096 SDHCQ99643 169 aaPredicted RBP16.65■□□□□ 0.26
ATG4D-212ENST00000590096 SPIN2AQ99865 258 aa16.65■□□□□ 0.26
ATG4D-212ENST00000590096 SPIN2BQ9BPZ2 258 aa16.65■□□□□ 0.26
ATG4D-212ENST00000590096 RTBDNQ9BSG5 229 aaPredicted RBP16.65■□□□□ 0.26
ATG4D-212ENST00000590096 C5orf66Q9H5L9 145 aa16.65■□□□□ 0.26
ATG4D-212ENST00000590096 WNK1Q9H4A3 2382 aa16.64■□□□□ 0.25
ATG4D-212ENST00000590096 TEX13DA0A0J9YY54 714 aaPredicted RBP16.64■□□□□ 0.25
ATG4D-212ENST00000590096 UPK2O00526 184 aa16.64■□□□□ 0.25
ATG4D-212ENST00000590096 B3GALNT1O75752 331 aa16.64■□□□□ 0.25
ATG4D-212ENST00000590096 HLA-GP17693 338 aa16.64■□□□□ 0.25
ATG4D-212ENST00000590096 RPL27AP46776 148 aaKnown RBP16.64■□□□□ 0.25
ATG4D-212ENST00000590096 RAB9AP51151 201 aa16.64■□□□□ 0.25
ATG4D-212ENST00000590096 C10orf55Q5SWW7 151 aa16.64■□□□□ 0.25
ATG4D-212ENST00000590096 KLHL30-AS1Q8NEE0 82 aa16.64■□□□□ 0.25
ATG4D-212ENST00000590096 S100ZQ8WXG8 99 aa16.64■□□□□ 0.25
ATG4D-212ENST00000590096 AKIP1Q9NQ31 210 aa16.64■□□□□ 0.25
ATG4D-212ENST00000590096 ZNF355PQ9NSJ1 428 aa16.64■□□□□ 0.25
ATG4D-212ENST00000590096 SOX15O60248 233 aa16.63■□□□□ 0.25
ATG4D-212ENST00000590096 APELAP0DMC3 54 aa16.63■□□□□ 0.25
ATG4D-212ENST00000590096 SLC6A1P30531 599 aa16.63■□□□□ 0.25
ATG4D-212ENST00000590096 ZNF695Q8IW36 515 aa16.63■□□□□ 0.25
ATG4D-212ENST00000590096 OR5T1Q8NG75 326 aa16.63■□□□□ 0.25
ATG4D-212ENST00000590096 TP53RKQ96S44 253 aa16.63■□□□□ 0.25
ATG4D-212ENST00000590096 KLK15Q9H2R5 256 aa16.63■□□□□ 0.25
ATG4D-212ENST00000590096 TRAV3A0A0B4J244 114 aa16.62■□□□□ 0.25
ATG4D-212ENST00000590096 NAP1L6A6NFF2 107 aa16.62■□□□□ 0.25
ATG4D-212ENST00000590096 ATG12O94817 140 aa16.62■□□□□ 0.25
ATG4D-212ENST00000590096 PF4P02776 101 aa16.62■□□□□ 0.25
ATG4D-212ENST00000590096 IL6RP08887 468 aaPredicted RBP16.62■□□□□ 0.25
ATG4D-212ENST00000590096 IL7P13232 177 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms