RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 CD74P04233 296 aa13.62□□□□□ -0.23
H3F3B-207ENST00000589417 TSPAN5P62079 268 aa13.62□□□□□ -0.23
H3F3B-207ENST00000589417 AADACL3Q5VUY0 350 aa13.62□□□□□ -0.23
H3F3B-207ENST00000589417 LHFPL1Q86WI0 220 aa13.62□□□□□ -0.23
H3F3B-207ENST00000589417 VKORC1L1Q8N0U8 176 aa13.62□□□□□ -0.23
H3F3B-207ENST00000589417 ARRDC1Q8N5I2 433 aa13.62□□□□□ -0.23
H3F3B-207ENST00000589417 TMEM229BQ8NBD8 167 aa13.62□□□□□ -0.23
H3F3B-207ENST00000589417 SRSF12Q8WXF0 261 aaKnown RBP13.62□□□□□ -0.23
H3F3B-207ENST00000589417 SPIN2AQ99865 258 aa13.62□□□□□ -0.23
H3F3B-207ENST00000589417 SPIN2BQ9BPZ2 258 aa13.62□□□□□ -0.23
H3F3B-207ENST00000589417 RSRP1Q9BUV0 290 aa13.62□□□□□ -0.23
H3F3B-207ENST00000589417 TNCP24821 2201 aa13.62□□□□□ -0.23
H3F3B-207ENST00000589417 ACTL6BO94805 426 aa13.61□□□□□ -0.23
H3F3B-207ENST00000589417 NQO2P16083 231 aa13.61□□□□□ -0.23
H3F3B-207ENST00000589417 F2RP25116 425 aa13.61□□□□□ -0.23
H3F3B-207ENST00000589417 TNXAQ16473 311 aa13.61□□□□□ -0.23
H3F3B-207ENST00000589417 DEFB136Q30KP8 78 aa13.61□□□□□ -0.23
H3F3B-207ENST00000589417 PDLIM3Q53GG5 364 aaPredicted RBP13.61□□□□□ -0.23
H3F3B-207ENST00000589417 REC114Q7Z4M0 266 aa13.61□□□□□ -0.23
H3F3B-207ENST00000589417 OR11H1Q8NG94 326 aa13.61□□□□□ -0.23
H3F3B-207ENST00000589417 OR1N2Q8NGR9 330 aa13.61□□□□□ -0.23
H3F3B-207ENST00000589417 SMIM4Q8WVI0 70 aa13.61□□□□□ -0.23
H3F3B-207ENST00000589417 DIRAS2Q96HU8 199 aa13.61□□□□□ -0.23
H3F3B-207ENST00000589417 DUX3Q96PT4 197 aa13.61□□□□□ -0.23
H3F3B-207ENST00000589417 COMMD9Q9P000 198 aa13.61□□□□□ -0.23
H3F3B-207ENST00000589417 CD3DP04234 171 aa13.6□□□□□ -0.23
H3F3B-207ENST00000589417 LGALS1P09382 135 aaKnown RBP13.6□□□□□ -0.23
H3F3B-207ENST00000589417 ZNF616Q08AN1 781 aa13.6□□□□□ -0.23
H3F3B-207ENST00000589417 EGFEM1PQ0D2K5 195 aa13.6□□□□□ -0.23
H3F3B-207ENST00000589417 RNASE10Q5GAN6 216 aaKnown RBP13.6□□□□□ -0.23
H3F3B-207ENST00000589417 SLC38A6Q8IZM9 456 aa13.6□□□□□ -0.23
H3F3B-207ENST00000589417 TTC9CQ8N5M4 171 aa13.6□□□□□ -0.23
H3F3B-207ENST00000589417 ADAD2Q8NCV1 583 aaKnown RBP13.6□□□□□ -0.23
H3F3B-207ENST00000589417 OR5T1Q8NG75 326 aa13.6□□□□□ -0.23
H3F3B-207ENST00000589417 OR51H1Q8NH63 302 aa13.6□□□□□ -0.23
H3F3B-207ENST00000589417 DGCR14Q96DF8 476 aaKnown RBP13.6□□□□□ -0.23
H3F3B-207ENST00000589417 TINAGL1Q9GZM7 467 aaPredicted RBP13.6□□□□□ -0.23
H3F3B-207ENST00000589417 A0A0G2JLM5 398 aa13.59□□□□□ -0.23
H3F3B-207ENST00000589417 TRGV3P03979 118 aa13.59□□□□□ -0.23
H3F3B-207ENST00000589417 OR8U8P0C7N1 319 aa13.59□□□□□ -0.23
H3F3B-207ENST00000589417 OR9G9P0C7N8 305 aa13.59□□□□□ -0.23
H3F3B-207ENST00000589417 TAS2R19P59542 299 aa13.59□□□□□ -0.23
H3F3B-207ENST00000589417 DGCR2P98153 550 aa13.59□□□□□ -0.23
H3F3B-207ENST00000589417 KLK9Q2XQG4 91 aa13.59□□□□□ -0.23
H3F3B-207ENST00000589417 ZNF585BQ52M93 769 aa13.59□□□□□ -0.23
H3F3B-207ENST00000589417 FOXB2Q5VYV0 432 aa13.59□□□□□ -0.23
H3F3B-207ENST00000589417 OR4A47Q6IF82 309 aa13.59□□□□□ -0.23
H3F3B-207ENST00000589417 CASTOR1Q8WTX7 329 aa13.59□□□□□ -0.23
H3F3B-207ENST00000589417 ZNF486Q96H40 463 aaPredicted RBP13.59□□□□□ -0.23
H3F3B-207ENST00000589417 MS4A10Q96PG2 267 aa13.59□□□□□ -0.23
H3F3B-207ENST00000589417 C6orf62Q9GZU0 229 aaPredicted RBP13.59□□□□□ -0.23
H3F3B-207ENST00000589417 KLK9Q9UKQ9 250 aa13.59□□□□□ -0.23
H3F3B-207ENST00000589417 TEX22C9J3V5 150 aa13.58□□□□□ -0.24
H3F3B-207ENST00000589417 M0QYG6 137 aa13.58□□□□□ -0.24
H3F3B-207ENST00000589417 GSTZ1O43708 216 aaPredicted RBP13.58□□□□□ -0.24
H3F3B-207ENST00000589417 RLN1P04808 185 aa13.58□□□□□ -0.24
H3F3B-207ENST00000589417 IFNA6P05013 189 aa13.58□□□□□ -0.24
H3F3B-207ENST00000589417 ZNF735P0CB33 412 aa13.58□□□□□ -0.24
H3F3B-207ENST00000589417 PTBP1P26599 531 aaKnown RBP eCLIP13.58□□□□□ -0.24
H3F3B-207ENST00000589417 S100GP29377 79 aa13.58□□□□□ -0.24
H3F3B-207ENST00000589417 TNFSF8P32971 234 aa13.58□□□□□ -0.24
H3F3B-207ENST00000589417 TPPP2P59282 170 aa13.58□□□□□ -0.24
H3F3B-207ENST00000589417 RPL8P62917 257 aaKnown RBP13.58□□□□□ -0.24
H3F3B-207ENST00000589417 MCFD2Q8NI22 146 aa13.58□□□□□ -0.24
H3F3B-207ENST00000589417 USMG5Q96IX5 58 aa13.58□□□□□ -0.24
H3F3B-207ENST00000589417 RSL24D1Q9UHA3 163 aaKnown RBP13.58□□□□□ -0.24
H3F3B-207ENST00000589417 PRKDCP78527 4128 aaKnown RBP13.58□□□□□ -0.24
H3F3B-207ENST00000589417 TRBV9A0A0B4J1U6 114 aa13.57□□□□□ -0.24
H3F3B-207ENST00000589417 E7EUB6 86 aa13.57□□□□□ -0.24
H3F3B-207ENST00000589417 UPK2O00526 184 aa13.57□□□□□ -0.24
H3F3B-207ENST00000589417 S1PR2O95136 353 aa13.57□□□□□ -0.24
H3F3B-207ENST00000589417 HSPB1P04792 205 aaKnown RBP13.57□□□□□ -0.24
H3F3B-207ENST00000589417 HLA-GP17693 338 aa13.57□□□□□ -0.24
H3F3B-207ENST00000589417 RND3P61587 244 aa13.57□□□□□ -0.24
H3F3B-207ENST00000589417 IL18Q14116 193 aa13.57□□□□□ -0.24
H3F3B-207ENST00000589417 RNASE12Q5GAN4 147 aaKnown RBP13.57□□□□□ -0.24
H3F3B-207ENST00000589417 STEAP1BQ6NZ63 245 aa13.57□□□□□ -0.24
H3F3B-207ENST00000589417 SLC25A42Q86VD7 318 aa13.57□□□□□ -0.24
H3F3B-207ENST00000589417 TERB2Q8NHR7 220 aa13.57□□□□□ -0.24
H3F3B-207ENST00000589417 PHB2Q99623 299 aa13.57□□□□□ -0.24
H3F3B-207ENST00000589417 SLC2A9Q9NRM0 540 aa13.57□□□□□ -0.24
H3F3B-207ENST00000589417 A0A1B0GW64 132 aa13.56□□□□□ -0.24
H3F3B-207ENST00000589417 NPIPB5A8MRT5 1133 aa13.56□□□□□ -0.24
H3F3B-207ENST00000589417 LINC01619G3V211 115 aa13.56□□□□□ -0.24
H3F3B-207ENST00000589417 RAB3DO95716 219 aa13.56□□□□□ -0.24
H3F3B-207ENST00000589417 CRYGCP07315 174 aa13.56□□□□□ -0.24
H3F3B-207ENST00000589417 RPL27AP46776 148 aaKnown RBP13.56□□□□□ -0.24
H3F3B-207ENST00000589417 MEF2DQ14814 521 aa13.56□□□□□ -0.24
H3F3B-207ENST00000589417 C10orf55Q5SWW7 151 aa13.56□□□□□ -0.24
H3F3B-207ENST00000589417 SSX9Q7RTT3 188 aa13.56□□□□□ -0.24
H3F3B-207ENST00000589417 OR4D10Q8NGI6 311 aa13.56□□□□□ -0.24
H3F3B-207ENST00000589417 DPF1Q92782 380 aa13.56□□□□□ -0.24
H3F3B-207ENST00000589417 OR5B12Q96R08 314 aa13.56□□□□□ -0.24
H3F3B-207ENST00000589417 SRSF8Q9BRL6 282 aaKnown RBP13.56□□□□□ -0.24
H3F3B-207ENST00000589417 ZNF355PQ9NSJ1 428 aa13.56□□□□□ -0.24
H3F3B-207ENST00000589417 ZNF257Q9Y2Q1 563 aa13.56□□□□□ -0.24
H3F3B-207ENST00000589417 MARCH11A6NNE9 402 aa13.55□□□□□ -0.24
H3F3B-207ENST00000589417 LPAR6P43657 344 aa13.55□□□□□ -0.24
H3F3B-207ENST00000589417 PHLDA2Q53GA4 152 aa13.55□□□□□ -0.24
H3F3B-207ENST00000589417 ZNF343Q6P1L6 599 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms