RNA–Protein interactions for RNA: ENST00000588323.1

VPS4B-203, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 3

Gene VPS4B, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-203ENST00000588323 RPL35P42766 123 aaKnown RBP1.96□□□□□ -2.1
VPS4B-203ENST00000588323 SLC18A1P54219 525 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 DLX6P56179 175 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 RAB25P57735 213 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 TCTAP57738 103 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 TPI1P60174 286 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 ADIGQ0VDE8 80 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 SKP2Q13309 424 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 MPPED2Q15777 294 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 FBXL19-AS1Q494R0 122 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 SPIN4Q56A73 249 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 TNFAIP8L3Q5GJ75 292 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 SMARCD3Q6STE5 483 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 FAM183BPQ6ZVS7 135 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 LYG2Q86SG7 212 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 OR6V1Q8N148 313 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 C2orf73Q8N5S3 287 aaPredicted RBP1.96□□□□□ -2.1
VPS4B-203ENST00000588323 ZNF645Q8N7E2 425 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 ZNF283Q8N7M2 679 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 C15orf56Q8N910 161 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 OR11H1Q8NG94 326 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 OR4M2Q8NGB6 313 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 OR4M1Q8NGD0 313 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 OR11H2Q8NH07 326 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 C11orf40Q8WZ69 217 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 TMEM203Q969S6 136 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 DDIT4LQ96D03 193 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 YIPF6Q96EC8 236 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 CPNE2Q96FN4 548 aaPredicted RBP1.96□□□□□ -2.1
VPS4B-203ENST00000588323 OR10C1Q96KK4 312 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 KCTD7Q96MP8 289 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 BIRC8Q96P09 236 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 ZNF382Q96SR6 550 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 C2orf88Q9BSF0 95 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 CCDC32Q9BV29 185 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 CDCA4Q9BXL8 241 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 MRPL20Q9BYC9 149 aaKnown RBP1.96□□□□□ -2.1
VPS4B-203ENST00000588323 SLC17A9Q9BYT1 436 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 NMNAT1Q9HAN9 279 aaPredicted RBP1.96□□□□□ -2.1
VPS4B-203ENST00000588323 WFDC1Q9HC57 220 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 BIN3Q9NQY0 253 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 CYTL1Q9NRR1 136 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 COMMD9Q9P000 198 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 GLS2Q9UI32 602 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 ZNF391Q9UJN7 358 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 OR52A1Q9UKL2 312 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 KLK12Q9UKR0 248 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 HHLA2Q9UM44 414 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 LSM5Q9Y4Y9 91 aaKnown RBP1.96□□□□□ -2.1
VPS4B-203ENST00000588323 PDZD2O15018 2839 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 NUP205Q92621 2012 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 DOCK6Q96HP0 2047 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 CCDC168Q8NDH2 2452 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 CELSR2Q9HCU4 2923 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 PCDH15Q96QU1 1955 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 PI4KAP42356 2102 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 STAB1Q9NY15 2570 aa1.96□□□□□ -2.1
VPS4B-203ENST00000588323 MUC22E2RYF6 1773 aaPredicted RBP1.95□□□□□ -2.1
VPS4B-203ENST00000588323 RP1L1Q8IWN7 2480 aaPredicted RBP1.95□□□□□ -2.1
VPS4B-203ENST00000588323 KNL1Q8NG31 2342 aa1.95□□□□□ -2.1
VPS4B-203ENST00000588323 KIF26AQ9ULI4 1882 aaPredicted RBP1.95□□□□□ -2.1
VPS4B-203ENST00000588323 TRBV6-6A0A0A6YYG2 114 aa1.95□□□□□ -2.1
VPS4B-203ENST00000588323 A0A0G2JMP0 313 aa1.95□□□□□ -2.1
VPS4B-203ENST00000588323 A0A0U1RQV1 116 aa1.95□□□□□ -2.1
VPS4B-203ENST00000588323 A0A1B0GXF2 115 aa1.95□□□□□ -2.1
VPS4B-203ENST00000588323 OR5H1A6NKK0 313 aa1.95□□□□□ -2.1
VPS4B-203ENST00000588323 PPP5D1E7EU14 171 aa1.95□□□□□ -2.1
VPS4B-203ENST00000588323 F5H768 121 aa1.95□□□□□ -2.1
VPS4B-203ENST00000588323 K7EQS6 105 aa1.95□□□□□ -2.1
VPS4B-203ENST00000588323 UPK2O00526 184 aa1.95□□□□□ -2.1
VPS4B-203ENST00000588323 KPNA4O00629 521 aaPredicted RBP1.95□□□□□ -2.1
VPS4B-203ENST00000588323 SOCS1O15524 211 aa1.95□□□□□ -2.1
VPS4B-203ENST00000588323 ZNF861PO60384 105 aa1.95□□□□□ -2.1
VPS4B-203ENST00000588323 BANF1O75531 89 aa1.95□□□□□ -2.1
VPS4B-203ENST00000588323 OR2J2O76002 312 aa1.95□□□□□ -2.1
VPS4B-203ENST00000588323 CCNE2O96020 404 aa1.95□□□□□ -2.1
VPS4B-203ENST00000588323 IFNA1P01562 189 aa1.95□□□□□ -2.1
VPS4B-203ENST00000588323 IFNGP01579 166 aa1.95□□□□□ -2.1
VPS4B-203ENST00000588323 IGLV2-8P01709 118 aa1.95□□□□□ -2.1
VPS4B-203ENST00000588323 PPBPP02775 128 aa1.95□□□□□ -2.1
VPS4B-203ENST00000588323 SERPINA7P05543 415 aa1.95□□□□□ -2.1
VPS4B-203ENST00000588323 FBP1P09467 338 aa1.95□□□□□ -2.1
VPS4B-203ENST00000588323 ZNF688P0C7X2 276 aa1.95□□□□□ -2.1
VPS4B-203ENST00000588323 C1GALT1C1LP0DN25 315 aa1.95□□□□□ -2.1
VPS4B-203ENST00000588323 OR13C7P0DN81 318 aa1.95□□□□□ -2.1
VPS4B-203ENST00000588323 ZNF25P17030 456 aaPredicted RBP1.95□□□□□ -2.1
VPS4B-203ENST00000588323 IL3RAP26951 378 aa1.95□□□□□ -2.1
VPS4B-203ENST00000588323 GRPRP30550 384 aa1.95□□□□□ -2.1
VPS4B-203ENST00000588323 SDC4P31431 198 aa1.95□□□□□ -2.1
VPS4B-203ENST00000588323 PMELP40967 661 aa1.95□□□□□ -2.1
VPS4B-203ENST00000588323 SULT1A1P50225 295 aa1.95□□□□□ -2.1
VPS4B-203ENST00000588323 SULT1A2P50226 295 aa1.95□□□□□ -2.1
VPS4B-203ENST00000588323 PPP1CAP62136 330 aa1.95□□□□□ -2.1
VPS4B-203ENST00000588323 RANP62826 216 aaKnown RBP1.95□□□□□ -2.1
VPS4B-203ENST00000588323 RBX1P62877 108 aa1.95□□□□□ -2.1
VPS4B-203ENST00000588323 GRB2P62993 217 aaKnown RBP1.95□□□□□ -2.1
VPS4B-203ENST00000588323 HBG1P69891 147 aa1.95□□□□□ -2.1
VPS4B-203ENST00000588323 HBG2P69892 147 aa1.95□□□□□ -2.1
VPS4B-203ENST00000588323 PRDX1Q06830 199 aaKnown RBP1.95□□□□□ -2.1
VPS4B-203ENST00000588323 ZNF616Q08AN1 781 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms