RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 ST8SIA3O43173 380 aa9.04□□□□□ -0.96
VMP1-207ENST00000588131 KBTBD11O94819 623 aa9.04□□□□□ -0.96
VMP1-207ENST00000588131 MPC2O95563 127 aa9.04□□□□□ -0.96
VMP1-207ENST00000588131 C1QBP02746 253 aa9.04□□□□□ -0.96
VMP1-207ENST00000588131 HNRNPCP07910 306 aaKnown RBP eCLIP9.04□□□□□ -0.96
VMP1-207ENST00000588131 PSMB6P28072 239 aa9.04□□□□□ -0.96
VMP1-207ENST00000588131 BRS3P32247 399 aa9.04□□□□□ -0.96
VMP1-207ENST00000588131 NKX2-1P43699 371 aaPredicted RBP9.04□□□□□ -0.96
VMP1-207ENST00000588131 LGALS7P47929 136 aa9.04□□□□□ -0.96
VMP1-207ENST00000588131 ARHGDIBP52566 201 aa9.04□□□□□ -0.96
VMP1-207ENST00000588131 F2RL1P55085 397 aa9.04□□□□□ -0.96
VMP1-207ENST00000588131 BPIFB3P59826 476 aa9.04□□□□□ -0.96
VMP1-207ENST00000588131 ID3Q02535 119 aa9.04□□□□□ -0.96
VMP1-207ENST00000588131 MRGPRG-AS1Q2M3A8 158 aa9.04□□□□□ -0.96
VMP1-207ENST00000588131 DEFB112Q30KQ8 113 aa9.04□□□□□ -0.96
VMP1-207ENST00000588131 VMA21Q3ZAQ7 101 aa9.04□□□□□ -0.96
VMP1-207ENST00000588131 ZFP69Q49AA0 526 aa9.04□□□□□ -0.96
VMP1-207ENST00000588131 C11orf87Q6NUJ2 197 aa9.04□□□□□ -0.96
VMP1-207ENST00000588131 FOXRED2Q8IWF2 684 aa9.04□□□□□ -0.96
VMP1-207ENST00000588131 FAM71E2Q8N5Q1 922 aa9.04□□□□□ -0.96
VMP1-207ENST00000588131 OR4A16Q8NH70 328 aa9.04□□□□□ -0.96
VMP1-207ENST00000588131 TMEM167AQ8TBQ9 72 aa9.04□□□□□ -0.96
VMP1-207ENST00000588131 PIFOQ8TCI5 191 aa9.04□□□□□ -0.96
VMP1-207ENST00000588131 TSNAXQ99598 290 aaKnown RBP9.04□□□□□ -0.96
VMP1-207ENST00000588131 RNF5Q99942 180 aa9.04□□□□□ -0.96
VMP1-207ENST00000588131 AIFM2Q9BRQ8 373 aa9.04□□□□□ -0.96
VMP1-207ENST00000588131 RNF126Q9BV68 326 aa9.04□□□□□ -0.96
VMP1-207ENST00000588131 MAGT1Q9H0U3 335 aa9.04□□□□□ -0.96
VMP1-207ENST00000588131 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.04□□□□□ -0.96
VMP1-207ENST00000588131 COA4Q9NYJ1 87 aa9.04□□□□□ -0.96
VMP1-207ENST00000588131 OR5AC2Q9NZP5 309 aa9.04□□□□□ -0.96
VMP1-207ENST00000588131 RCL1Q9Y2P8 373 aaKnown RBP9.04□□□□□ -0.96
VMP1-207ENST00000588131 FAM96BQ9Y3D0 163 aa9.04□□□□□ -0.96
VMP1-207ENST00000588131 POMT1Q9Y6A1 747 aa9.04□□□□□ -0.96
VMP1-207ENST00000588131 ANK3Q12955 4377 aaKnown RBP9.04□□□□□ -0.96
VMP1-207ENST00000588131 NOTCH2Q04721 2471 aa9.04□□□□□ -0.96
VMP1-207ENST00000588131 C15orf61A6NNL5 157 aa9.03□□□□□ -0.96
VMP1-207ENST00000588131 FBP1P09467 338 aa9.03□□□□□ -0.96
VMP1-207ENST00000588131 TMEM11P17152 192 aa9.03□□□□□ -0.96
VMP1-207ENST00000588131 DYNLT3P51808 116 aa9.03□□□□□ -0.96
VMP1-207ENST00000588131 NKX2-5P52952 324 aaPredicted RBP9.03□□□□□ -0.96
VMP1-207ENST00000588131 POLR2GP62487 172 aaKnown RBP eCLIP9.03□□□□□ -0.96
VMP1-207ENST00000588131 MMDQ15546 238 aa9.03□□□□□ -0.96
VMP1-207ENST00000588131 LRRC75BQ2VPJ9 315 aa9.03□□□□□ -0.96
VMP1-207ENST00000588131 AARDQ4LEZ3 155 aa9.03□□□□□ -0.96
VMP1-207ENST00000588131 SPINK9Q5DT21 86 aa9.03□□□□□ -0.96
VMP1-207ENST00000588131 C9orf139Q6ZV77 190 aa9.03□□□□□ -0.96
VMP1-207ENST00000588131 THNSL2Q86YJ6 484 aa9.03□□□□□ -0.96
VMP1-207ENST00000588131 TEX45Q8NA69 505 aa9.03□□□□□ -0.96
VMP1-207ENST00000588131 NPBQ8NG41 125 aa9.03□□□□□ -0.96
VMP1-207ENST00000588131 GRPEL2Q8TAA5 225 aa9.03□□□□□ -0.96
VMP1-207ENST00000588131 PPP1R14BQ96C90 147 aa9.03□□□□□ -0.96
VMP1-207ENST00000588131 ZNF48Q96MX3 618 aaPredicted RBP9.03□□□□□ -0.96
VMP1-207ENST00000588131 SSX3Q99909 188 aa9.03□□□□□ -0.96
VMP1-207ENST00000588131 FBXL15Q9H469 300 aa9.03□□□□□ -0.96
VMP1-207ENST00000588131 ZNF430Q9H8G1 570 aaPredicted RBP9.03□□□□□ -0.96
VMP1-207ENST00000588131 PLSCR3Q9NRY6 295 aa9.03□□□□□ -0.96
VMP1-207ENST00000588131 MBD2Q9UBB5 411 aa9.03□□□□□ -0.96
VMP1-207ENST00000588131 METTL1Q9UBP6 276 aaKnown RBP9.03□□□□□ -0.96
VMP1-207ENST00000588131 CCDC168Q8NDH2 2452 aa9.03□□□□□ -0.96
VMP1-207ENST00000588131 FXYD6-FXYD2A0A087WZ82 144 aa9.02□□□□□ -0.97
VMP1-207ENST00000588131 RRHO14718 337 aa9.02□□□□□ -0.97
VMP1-207ENST00000588131 NBR2O15453 112 aa9.02□□□□□ -0.97
VMP1-207ENST00000588131 SSSCA1O60232 199 aa9.02□□□□□ -0.97
VMP1-207ENST00000588131 RBMXL2O75526 392 aaKnown RBP9.02□□□□□ -0.97
VMP1-207ENST00000588131 DEDDO75618 318 aa9.02□□□□□ -0.97
VMP1-207ENST00000588131 SNAPC5O75971 98 aa9.02□□□□□ -0.97
VMP1-207ENST00000588131 NDUFA3O95167 84 aa9.02□□□□□ -0.97
VMP1-207ENST00000588131 SPDEFO95238 335 aa9.02□□□□□ -0.97
VMP1-207ENST00000588131 LY6G6DO95868 133 aa9.02□□□□□ -0.97
VMP1-207ENST00000588131 FAM106CPP0CH98 169 aa9.02□□□□□ -0.97
VMP1-207ENST00000588131 SLC25A4P12235 298 aa9.02□□□□□ -0.97
VMP1-207ENST00000588131 LYL1P12980 280 aa9.02□□□□□ -0.97
VMP1-207ENST00000588131 TNFRSF9Q07011 255 aa9.02□□□□□ -0.97
VMP1-207ENST00000588131 FGL1Q08830 312 aa9.02□□□□□ -0.97
VMP1-207ENST00000588131 PJVKQ0ZLH3 352 aa9.02□□□□□ -0.97
VMP1-207ENST00000588131 PRSS54Q6PEW0 395 aa9.02□□□□□ -0.97
VMP1-207ENST00000588131 SPNS3Q6ZMD2 512 aa9.02□□□□□ -0.97
VMP1-207ENST00000588131 NOXA1Q86UR1 476 aa9.02□□□□□ -0.97
VMP1-207ENST00000588131 OR4A5Q8NH83 315 aa9.02□□□□□ -0.97
VMP1-207ENST00000588131 VSTM2AQ8TAG5 236 aa9.02□□□□□ -0.97
VMP1-207ENST00000588131 THAP6Q8TBB0 222 aa9.02□□□□□ -0.97
VMP1-207ENST00000588131 CLCC1Q96S66 551 aa9.02□□□□□ -0.97
VMP1-207ENST00000588131 TMUB1Q9BVT8 246 aa9.02□□□□□ -0.97
VMP1-207ENST00000588131 RBKSQ9H477 322 aa9.02□□□□□ -0.97
VMP1-207ENST00000588131 C11orf1Q9H5F2 150 aa9.02□□□□□ -0.97
VMP1-207ENST00000588131 TMEM14BQ9NUH8 114 aa9.02□□□□□ -0.97
VMP1-207ENST00000588131 HSPB7Q9UBY9 170 aa9.02□□□□□ -0.97
VMP1-207ENST00000588131 PRNDQ9UKY0 176 aa9.02□□□□□ -0.97
VMP1-207ENST00000588131 FOXA2Q9Y261 457 aaPredicted RBP9.02□□□□□ -0.97
VMP1-207ENST00000588131 SIGLEC9Q9Y336 463 aa9.02□□□□□ -0.97
VMP1-207ENST00000588131 SVEP1Q4LDE5 3571 aa9.01□□□□□ -0.97
VMP1-207ENST00000588131 ABCA1O95477 2261 aa9.01□□□□□ -0.97
VMP1-207ENST00000588131 FAM90A26D6RGX4 464 aa9.01□□□□□ -0.97
VMP1-207ENST00000588131 H3BUX3 64 aa9.01□□□□□ -0.97
VMP1-207ENST00000588131 FCN1O00602 326 aa9.01□□□□□ -0.97
VMP1-207ENST00000588131 KCNAB3O43448 404 aa9.01□□□□□ -0.97
VMP1-207ENST00000588131 TMEM50AO95807 157 aa9.01□□□□□ -0.97
VMP1-207ENST00000588131 OPN1MWP04001 364 aa9.01□□□□□ -0.97
VMP1-207ENST00000588131 OPN1MW2P0DN77 364 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms