RNA–Protein interactions for RNA: ENST00000588059.5

VPS4B-202, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 1,252 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-202ENST00000588059 SLC25A38Q96DW6 304 aa8.26□□□□□ -1.09
VPS4B-202ENST00000588059 DCSTAMPQ9H295 470 aa8.26□□□□□ -1.09
VPS4B-202ENST00000588059 DIABLOQ9NR28 239 aa8.26□□□□□ -1.09
VPS4B-202ENST00000588059 SLC35D1Q9NTN3 355 aa8.26□□□□□ -1.09
VPS4B-202ENST00000588059 SDHAF2Q9NX18 166 aa8.26□□□□□ -1.09
VPS4B-202ENST00000588059 VPS13DQ5THJ4 4388 aa8.26□□□□□ -1.09
VPS4B-202ENST00000588059 ABCA13Q86UQ4 5058 aa8.25□□□□□ -1.09
VPS4B-202ENST00000588059 LOC102724200A0A096LPH7 203 aaPredicted RBP8.25□□□□□ -1.09
VPS4B-202ENST00000588059 MSGN1A6NI15 193 aa8.25□□□□□ -1.09
VPS4B-202ENST00000588059 SSX5O60225 188 aa8.25□□□□□ -1.09
VPS4B-202ENST00000588059 NDUFB8O95169 186 aa8.25□□□□□ -1.09
VPS4B-202ENST00000588059 DIRAS3O95661 229 aa8.25□□□□□ -1.09
VPS4B-202ENST00000588059 CTXN2P0C2S0 81 aa8.25□□□□□ -1.09
VPS4B-202ENST00000588059 APELAP0DMC3 54 aa8.25□□□□□ -1.09
VPS4B-202ENST00000588059 NFYAP23511 347 aaPredicted RBP8.25□□□□□ -1.09
VPS4B-202ENST00000588059 RPS19P39019 145 aaKnown RBP8.25□□□□□ -1.09
VPS4B-202ENST00000588059 CBX3Q13185 183 aa8.25□□□□□ -1.09
VPS4B-202ENST00000588059 Q6ZS49 121 aa8.25□□□□□ -1.09
VPS4B-202ENST00000588059 SLC16A13Q7RTY0 426 aa8.25□□□□□ -1.09
VPS4B-202ENST00000588059 AKIP1Q9NQ31 210 aa8.25□□□□□ -1.09
VPS4B-202ENST00000588059 TECRQ9NZ01 308 aaKnown RBP8.25□□□□□ -1.09
VPS4B-202ENST00000588059 SPATA2Q9UM82 520 aa8.25□□□□□ -1.09
VPS4B-202ENST00000588059 SELENOKQ9Y6D0 94 aa8.25□□□□□ -1.09
VPS4B-202ENST00000588059 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.24□□□□□ -1.09
VPS4B-202ENST00000588059 FAM223BA6NKX1 122 aa8.24□□□□□ -1.09
VPS4B-202ENST00000588059 TMEM127O75204 238 aa8.24□□□□□ -1.09
VPS4B-202ENST00000588059 FCER2P06734 321 aa8.24□□□□□ -1.09
VPS4B-202ENST00000588059 OR9G9P0C7N8 305 aa8.24□□□□□ -1.09
VPS4B-202ENST00000588059 ATF4P18848 351 aaPredicted RBP8.24□□□□□ -1.09
VPS4B-202ENST00000588059 ARPC4P59998 168 aa8.24□□□□□ -1.09
VPS4B-202ENST00000588059 RHOGP84095 191 aa8.24□□□□□ -1.09
VPS4B-202ENST00000588059 MRGPRG-AS1Q2M3A8 158 aa8.24□□□□□ -1.09
VPS4B-202ENST00000588059 CNIH2Q6PI25 160 aa8.24□□□□□ -1.09
VPS4B-202ENST00000588059 FAM223AQ8IWN6 122 aa8.24□□□□□ -1.09
VPS4B-202ENST00000588059 TMEM61Q8N0U2 210 aa8.24□□□□□ -1.09
VPS4B-202ENST00000588059 S100A16Q96FQ6 103 aaKnown RBP8.24□□□□□ -1.09
VPS4B-202ENST00000588059 FUNDC2Q9BWH2 189 aa8.24□□□□□ -1.09
VPS4B-202ENST00000588059 ANXA10Q9UJ72 324 aa8.24□□□□□ -1.09
VPS4B-202ENST00000588059 TP53TG1Q9Y2A0 90 aa8.24□□□□□ -1.09
VPS4B-202ENST00000588059 A0A0A6YYH2 397 aa8.23□□□□□ -1.09
VPS4B-202ENST00000588059 TRBV9A0A0B4J1U6 114 aa8.23□□□□□ -1.09
VPS4B-202ENST00000588059 MEIS3P1A6NDR6 274 aa8.23□□□□□ -1.09
VPS4B-202ENST00000588059 A6NJ64 397 aa8.23□□□□□ -1.09
VPS4B-202ENST00000588059 PRH1P02810 166 aa8.23□□□□□ -1.09
VPS4B-202ENST00000588059 PTHLHP12272 177 aa8.23□□□□□ -1.09
VPS4B-202ENST00000588059 BMI1P35226 326 aa8.23□□□□□ -1.09
VPS4B-202ENST00000588059 VBP1P61758 197 aa8.23□□□□□ -1.09
VPS4B-202ENST00000588059 NCS1P62166 190 aa8.23□□□□□ -1.09
VPS4B-202ENST00000588059 ZNF45Q02386 682 aa8.23□□□□□ -1.09
VPS4B-202ENST00000588059 RTL8BQ17RB0 113 aa8.23□□□□□ -1.09
VPS4B-202ENST00000588059 UBE2NLQ5JXB2 153 aa8.23□□□□□ -1.09
VPS4B-202ENST00000588059 GVQW1Q8N7I0 195 aa8.23□□□□□ -1.09
VPS4B-202ENST00000588059 SAMD12Q8N8I0 201 aa8.23□□□□□ -1.09
VPS4B-202ENST00000588059 BEST4Q8NFU0 473 aa8.23□□□□□ -1.09
VPS4B-202ENST00000588059 OR52B4Q8NGK2 314 aa8.23□□□□□ -1.09
VPS4B-202ENST00000588059 CACNG8Q8WXS5 425 aa8.23□□□□□ -1.09
VPS4B-202ENST00000588059 C5orf30Q96GV9 206 aa8.23□□□□□ -1.09
VPS4B-202ENST00000588059 HARBI1Q96MB7 349 aa8.23□□□□□ -1.09
VPS4B-202ENST00000588059 PHB2Q99623 299 aa8.23□□□□□ -1.09
VPS4B-202ENST00000588059 AUNIPQ9H7T9 357 aa8.23□□□□□ -1.09
VPS4B-202ENST00000588059 OR2W1Q9Y3N9 320 aa8.23□□□□□ -1.09
VPS4B-202ENST00000588059 DMRT1Q9Y5R6 373 aa8.23□□□□□ -1.09
VPS4B-202ENST00000588059 MUC4Q99102 2169 aa8.22□□□□□ -1.09
VPS4B-202ENST00000588059 PPP5D1E7EU14 171 aa8.22□□□□□ -1.09
VPS4B-202ENST00000588059 LGALS9O00182 355 aa8.22□□□□□ -1.09
VPS4B-202ENST00000588059 SHOXO15266 292 aa8.22□□□□□ -1.09
VPS4B-202ENST00000588059 SPRY2O43597 315 aa8.22□□□□□ -1.09
VPS4B-202ENST00000588059 TUSC2O75896 110 aa8.22□□□□□ -1.09
VPS4B-202ENST00000588059 HLA-AP01891 365 aaKnown RBP8.22□□□□□ -1.09
VPS4B-202ENST00000588059 SMIM18P0DKX4 95 aa8.22□□□□□ -1.09
VPS4B-202ENST00000588059 RRASP10301 218 aa8.22□□□□□ -1.09
VPS4B-202ENST00000588059 PRR20EP86478 221 aa8.22□□□□□ -1.09
VPS4B-202ENST00000588059 PRR20CP86479 221 aa8.22□□□□□ -1.09
VPS4B-202ENST00000588059 PRR20DP86480 221 aa8.22□□□□□ -1.09
VPS4B-202ENST00000588059 PRR20BP86481 221 aa8.22□□□□□ -1.09
VPS4B-202ENST00000588059 PRR20AP86496 221 aa8.22□□□□□ -1.09
VPS4B-202ENST00000588059 TAGLNQ01995 201 aaKnown RBP8.22□□□□□ -1.09
VPS4B-202ENST00000588059 ATP5G2Q06055 141 aa8.22□□□□□ -1.09
VPS4B-202ENST00000588059 DEFB135Q30KP9 77 aa8.22□□□□□ -1.09
VPS4B-202ENST00000588059 TMEM69Q5SWH9 247 aa8.22□□□□□ -1.09
VPS4B-202ENST00000588059 Q6ZWC4 215 aa8.22□□□□□ -1.09
VPS4B-202ENST00000588059 HOGA1Q86XE5 327 aa8.22□□□□□ -1.09
VPS4B-202ENST00000588059 ZNF645Q8N7E2 425 aa8.22□□□□□ -1.09
VPS4B-202ENST00000588059 OR13F1Q8NGS4 319 aa8.22□□□□□ -1.09
VPS4B-202ENST00000588059 PHLDA1Q8WV24 401 aaPredicted RBP8.22□□□□□ -1.09
VPS4B-202ENST00000588059 SLC25A46Q96AG3 418 aa8.22□□□□□ -1.09
VPS4B-202ENST00000588059 ADTRPQ96IZ2 230 aa8.22□□□□□ -1.09
VPS4B-202ENST00000588059 DCUN1D5Q9BTE7 237 aa8.22□□□□□ -1.09
VPS4B-202ENST00000588059 IFT46Q9NQC8 304 aa8.22□□□□□ -1.09
VPS4B-202ENST00000588059 PKHD1P08F94 4074 aa8.22□□□□□ -1.09
VPS4B-202ENST00000588059 IGKV1D-13A0A0B4J2D9 117 aa8.21□□□□□ -1.1
VPS4B-202ENST00000588059 SRRM4A7MD48 611 aaKnown RBP8.21□□□□□ -1.1
VPS4B-202ENST00000588059 XRCC3O43542 346 aa8.21□□□□□ -1.1
VPS4B-202ENST00000588059 CRYZL1O95825 349 aa8.21□□□□□ -1.1
VPS4B-202ENST00000588059 HLA-DQB1P01920 261 aa8.21□□□□□ -1.1
VPS4B-202ENST00000588059 IGKV1-13P0DP09 117 aa8.21□□□□□ -1.1
VPS4B-202ENST00000588059 CBLN1P23435 193 aa8.21□□□□□ -1.1
VPS4B-202ENST00000588059 FCGR2CP31995 323 aa8.21□□□□□ -1.1
VPS4B-202ENST00000588059 DUTP33316 252 aaKnown RBP8.21□□□□□ -1.1
VPS4B-202ENST00000588059 CBX5P45973 191 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms