RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 KBTBD11O94819 623 aa10.87□□□□□ -0.67
VMP1-206ENST00000587945 IGHV3-23P01764 117 aa10.87□□□□□ -0.67
VMP1-206ENST00000587945 EDN2P20800 178 aa10.87□□□□□ -0.67
VMP1-206ENST00000587945 RPL27AP46776 148 aaKnown RBP10.87□□□□□ -0.67
VMP1-206ENST00000587945 HAGHQ16775 308 aa10.87□□□□□ -0.67
VMP1-206ENST00000587945 C15orf32Q32M92 178 aa10.87□□□□□ -0.67
VMP1-206ENST00000587945 IDNKQ5T6J7 187 aa10.87□□□□□ -0.67
VMP1-206ENST00000587945 LCN12Q6JVE5 192 aa10.87□□□□□ -0.67
VMP1-206ENST00000587945 ZNF773Q6PK81 442 aa10.87□□□□□ -0.67
VMP1-206ENST00000587945 GTSCR1Q86UQ5 136 aa10.87□□□□□ -0.67
VMP1-206ENST00000587945 PUSL1Q8N0Z8 303 aaKnown RBP10.87□□□□□ -0.67
VMP1-206ENST00000587945 NECAP1Q8NC96 275 aa10.87□□□□□ -0.67
VMP1-206ENST00000587945 SECTM1Q8WVN6 248 aa10.87□□□□□ -0.67
VMP1-206ENST00000587945 YTHDF1Q9BYJ9 559 aaKnown RBP10.87□□□□□ -0.67
VMP1-206ENST00000587945 Q9H521 79 aa10.87□□□□□ -0.67
VMP1-206ENST00000587945 PALMDQ9NP74 551 aa10.87□□□□□ -0.67
VMP1-206ENST00000587945 CCL28Q9NRJ3 127 aa10.87□□□□□ -0.67
VMP1-206ENST00000587945 PEMTQ9UBM1 199 aa10.87□□□□□ -0.67
VMP1-206ENST00000587945 FBXL7Q9UJT9 491 aa10.87□□□□□ -0.67
VMP1-206ENST00000587945 S4R3C0 116 aa10.87□□□□□ -0.67
VMP1-206ENST00000587945 STARD9Q9P2P6 4700 aa10.87□□□□□ -0.67
VMP1-206ENST00000587945 OR2C1O95371 312 aa10.86□□□□□ -0.67
VMP1-206ENST00000587945 AREGP15514 252 aa10.86□□□□□ -0.67
VMP1-206ENST00000587945 FCGR2CP31995 323 aa10.86□□□□□ -0.67
VMP1-206ENST00000587945 ARPC4P59998 168 aa10.86□□□□□ -0.67
VMP1-206ENST00000587945 CD300EQ496F6 205 aaPredicted RBP10.86□□□□□ -0.67
VMP1-206ENST00000587945 ZNF66Q6ZN08 573 aa10.86□□□□□ -0.67
VMP1-206ENST00000587945 SLC25A42Q86VD7 318 aa10.86□□□□□ -0.67
VMP1-206ENST00000587945 BEST4Q8NFU0 473 aa10.86□□□□□ -0.67
VMP1-206ENST00000587945 TMEM167AQ8TBQ9 72 aa10.86□□□□□ -0.67
VMP1-206ENST00000587945 EDA2RQ9HAV5 297 aa10.86□□□□□ -0.67
VMP1-206ENST00000587945 ZNF257Q9Y2Q1 563 aa10.86□□□□□ -0.67
VMP1-206ENST00000587945 DMRT1Q9Y5R6 373 aa10.86□□□□□ -0.67
VMP1-206ENST00000587945 SELENOKQ9Y6D0 94 aa10.86□□□□□ -0.67
VMP1-206ENST00000587945 TNCP24821 2201 aa10.86□□□□□ -0.67
VMP1-206ENST00000587945 TENM2Q9NT68 2774 aa10.86□□□□□ -0.67
VMP1-206ENST00000587945 DPPA5A6NC42 116 aa10.85□□□□□ -0.67
VMP1-206ENST00000587945 NDUFB8O95169 186 aa10.85□□□□□ -0.67
VMP1-206ENST00000587945 ZNF735P0CB33 412 aa10.85□□□□□ -0.67
VMP1-206ENST00000587945 NEDD8Q15843 81 aa10.85□□□□□ -0.67
VMP1-206ENST00000587945 HOGA1Q86XE5 327 aa10.85□□□□□ -0.67
VMP1-206ENST00000587945 OR13F1Q8NGS4 319 aa10.85□□□□□ -0.67
VMP1-206ENST00000587945 VSTM2AQ8TAG5 236 aa10.85□□□□□ -0.67
VMP1-206ENST00000587945 FANCD2OSQ96PS1 177 aa10.85□□□□□ -0.67
VMP1-206ENST00000587945 SPATA25Q9BR10 227 aa10.85□□□□□ -0.67
VMP1-206ENST00000587945 PLEKHA3Q9HB20 300 aa10.85□□□□□ -0.67
VMP1-206ENST00000587945 SLC2A9Q9NRM0 540 aa10.85□□□□□ -0.67
VMP1-206ENST00000587945 ETV7Q9Y603 341 aa10.85□□□□□ -0.67
VMP1-206ENST00000587945 MEIS3P1A6NDR6 274 aa10.84□□□□□ -0.67
VMP1-206ENST00000587945 ZNF785A8K8V0 405 aa10.84□□□□□ -0.67
VMP1-206ENST00000587945 NPIPB5A8MRT5 1133 aa10.84□□□□□ -0.67
VMP1-206ENST00000587945 SULT1C2O00338 296 aa10.84□□□□□ -0.67
VMP1-206ENST00000587945 AIREO43918 545 aa10.84□□□□□ -0.67
VMP1-206ENST00000587945 PPYP01298 95 aa10.84□□□□□ -0.67
VMP1-206ENST00000587945 REG1AP05451 166 aa10.84□□□□□ -0.67
VMP1-206ENST00000587945 PSMB6P28072 239 aa10.84□□□□□ -0.67
VMP1-206ENST00000587945 FXYD4P59646 89 aa10.84□□□□□ -0.67
VMP1-206ENST00000587945 CD81P60033 236 aa10.84□□□□□ -0.67
VMP1-206ENST00000587945 DEFB114Q30KQ6 69 aa10.84□□□□□ -0.67
VMP1-206ENST00000587945 SPAG16Q8N0X2 631 aa10.84□□□□□ -0.67
VMP1-206ENST00000587945 OR2K2Q8NGT1 345 aa10.84□□□□□ -0.67
VMP1-206ENST00000587945 DYNLRB2Q8TF09 96 aa10.84□□□□□ -0.67
VMP1-206ENST00000587945 SLC5A7Q9GZV3 580 aa10.84□□□□□ -0.67
VMP1-206ENST00000587945 AUNIPQ9H7T9 357 aa10.84□□□□□ -0.67
VMP1-206ENST00000587945 RETNQ9HD89 108 aa10.84□□□□□ -0.67
VMP1-206ENST00000587945 TRAV3A0A0B4J244 114 aa10.83□□□□□ -0.68
VMP1-206ENST00000587945 C2orf70A6NJV1 201 aa10.83□□□□□ -0.68
VMP1-206ENST00000587945 CGB1A6NKQ9 187 aa10.83□□□□□ -0.68
VMP1-206ENST00000587945 GGCTO75223 188 aaKnown RBP10.83□□□□□ -0.68
VMP1-206ENST00000587945 HRASP01112 189 aa10.83□□□□□ -0.68
VMP1-206ENST00000587945 CRYGCP07315 174 aa10.83□□□□□ -0.68
VMP1-206ENST00000587945 CD7P09564 240 aa10.83□□□□□ -0.68
VMP1-206ENST00000587945 FOLR2P14207 255 aa10.83□□□□□ -0.68
VMP1-206ENST00000587945 HLA-GP17693 338 aa10.83□□□□□ -0.68
VMP1-206ENST00000587945 MAS1LP35410 378 aa10.83□□□□□ -0.68
VMP1-206ENST00000587945 TGFBR1P36897 503 aa10.83□□□□□ -0.68
VMP1-206ENST00000587945 KIR2DS2P43631 304 aa10.83□□□□□ -0.68
VMP1-206ENST00000587945 SCAND1P57086 179 aa10.83□□□□□ -0.68
VMP1-206ENST00000587945 RPL8P62917 257 aaKnown RBP10.83□□□□□ -0.68
VMP1-206ENST00000587945 OR4A47Q6IF82 309 aa10.83□□□□□ -0.68
VMP1-206ENST00000587945 CLEC19AQ6UXS0 136 aa10.83□□□□□ -0.68
VMP1-206ENST00000587945 CACNG8Q8WXS5 425 aa10.83□□□□□ -0.68
VMP1-206ENST00000587945 ISOC1Q96CN7 298 aa10.83□□□□□ -0.68
VMP1-206ENST00000587945 KCTD12Q96CX2 325 aaKnown RBP10.83□□□□□ -0.68
VMP1-206ENST00000587945 CCDC140Q96MF4 163 aa10.83□□□□□ -0.68
VMP1-206ENST00000587945 NEURL2Q9BR09 285 aa10.83□□□□□ -0.68
VMP1-206ENST00000587945 WFDC10AQ9H1F0 79 aa10.83□□□□□ -0.68
VMP1-206ENST00000587945 HRASLSQ9HDD0 168 aa10.83□□□□□ -0.68
VMP1-206ENST00000587945 CTRB1P17538 263 aa10.82□□□□□ -0.68
VMP1-206ENST00000587945 GUCA2BQ16661 112 aa10.82□□□□□ -0.68
VMP1-206ENST00000587945 TIMM50Q3ZCQ8 353 aa10.82□□□□□ -0.68
VMP1-206ENST00000587945 CTRB2Q6GPI1 263 aa10.82□□□□□ -0.68
VMP1-206ENST00000587945 DEFB125Q8N687 156 aa10.82□□□□□ -0.68
VMP1-206ENST00000587945 ZC4H2Q9NQZ6 224 aa10.82□□□□□ -0.68
VMP1-206ENST00000587945 DIABLOQ9NR28 239 aa10.82□□□□□ -0.68
VMP1-206ENST00000587945 DNAH1Q9P2D7 4330 aa10.81□□□□□ -0.68
VMP1-206ENST00000587945 A0A0A6YYH2 397 aa10.81□□□□□ -0.68
VMP1-206ENST00000587945 RBMY1BA6NDE4 496 aaKnown RBP10.81□□□□□ -0.68
VMP1-206ENST00000587945 RBMY1EA6NEQ0 496 aaKnown RBP10.81□□□□□ -0.68
VMP1-206ENST00000587945 MFSD2BA6NFX1 497 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms