RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 FAM213BQ8TBF2 198 aa18.12■□□□□ 0.49
CIRBP-208ENST00000586548 BBC3Q96PG8 261 aaPredicted RBP18.12■□□□□ 0.49
CIRBP-208ENST00000586548 PSMG3Q9BT73 122 aaPredicted RBP18.12■□□□□ 0.49
CIRBP-208ENST00000586548 TMEM147Q9BVK8 224 aa18.12■□□□□ 0.49
CIRBP-208ENST00000586548 WDR61Q9GZS3 305 aaKnown RBP18.12■□□□□ 0.49
CIRBP-208ENST00000586548 BET1LQ9NYM9 111 aa18.12■□□□□ 0.49
CIRBP-208ENST00000586548 IGSF10Q6WRI0 2623 aa18.12■□□□□ 0.49
CIRBP-208ENST00000586548 C15orf62A8K5M9 175 aa18.11■□□□□ 0.49
CIRBP-208ENST00000586548 H7C2Y5 167 aa18.11■□□□□ 0.49
CIRBP-208ENST00000586548 UPK2O00526 184 aa18.11■□□□□ 0.49
CIRBP-208ENST00000586548 TSPAN15O95858 294 aa18.11■□□□□ 0.49
CIRBP-208ENST00000586548 EFNA4P52798 201 aa18.11■□□□□ 0.49
CIRBP-208ENST00000586548 TUSC1Q2TAM9 212 aa18.11■□□□□ 0.49
CIRBP-208ENST00000586548 PUSL1Q8N0Z8 303 aaKnown RBP18.11■□□□□ 0.49
CIRBP-208ENST00000586548 CLEC7AQ9BXN2 247 aa18.11■□□□□ 0.49
CIRBP-208ENST00000586548 HEYLQ9NQ87 328 aaPredicted RBP18.11■□□□□ 0.49
CIRBP-208ENST00000586548 SRRM4A7MD48 611 aaKnown RBP18.1■□□□□ 0.49
CIRBP-208ENST00000586548 C22orf46C9J442 243 aa18.1■□□□□ 0.49
CIRBP-208ENST00000586548 IGLV1-47P01700 117 aa18.1■□□□□ 0.49
CIRBP-208ENST00000586548 GPR6P46095 362 aaPredicted RBP18.1■□□□□ 0.49
CIRBP-208ENST00000586548 HOXA1P49639 335 aaPredicted RBP18.1■□□□□ 0.49
CIRBP-208ENST00000586548 DIAPH2-AS1Q14236 149 aa18.1■□□□□ 0.49
CIRBP-208ENST00000586548 HLA-DRB5Q30154 266 aa18.1■□□□□ 0.49
CIRBP-208ENST00000586548 AKR1C8PQ5T2L2 129 aa18.1■□□□□ 0.49
CIRBP-208ENST00000586548 DPPA3Q6W0C5 159 aa18.1■□□□□ 0.49
CIRBP-208ENST00000586548 BEND2Q8NDZ0 799 aa18.1■□□□□ 0.49
CIRBP-208ENST00000586548 LHX4Q969G2 390 aa18.1■□□□□ 0.49
CIRBP-208ENST00000586548 HARBI1Q96MB7 349 aa18.1■□□□□ 0.49
CIRBP-208ENST00000586548 RAB13P51153 203 aa18.09■□□□□ 0.49
CIRBP-208ENST00000586548 OR4C13Q8NGP0 309 aa18.09■□□□□ 0.49
CIRBP-208ENST00000586548 FLYWCH2Q96CP2 140 aaKnown RBP18.09■□□□□ 0.49
CIRBP-208ENST00000586548 NARS2Q96I59 477 aaKnown RBP18.09■□□□□ 0.49
CIRBP-208ENST00000586548 SSBP3Q9BWW4 388 aaPredicted RBP18.09■□□□□ 0.49
CIRBP-208ENST00000586548 UQCC1Q9NVA1 299 aa18.09■□□□□ 0.49
CIRBP-208ENST00000586548 ZNF257Q9Y2Q1 563 aa18.09■□□□□ 0.49
CIRBP-208ENST00000586548 WASHC3Q9Y3C0 194 aa18.09■□□□□ 0.49
CIRBP-208ENST00000586548 LRBAP50851 2863 aa18.09■□□□□ 0.49
CIRBP-208ENST00000586548 UBE2L5PA0A1B0GUS4 154 aa18.09■□□□□ 0.49
CIRBP-208ENST00000586548 SAA1P0DJI8 122 aaPredicted RBP18.09■□□□□ 0.49
CIRBP-208ENST00000586548 VWC2Q2TAL6 325 aa18.09■□□□□ 0.49
CIRBP-208ENST00000586548 TAF15Q92804 592 aaKnown RBP eCLIP18.09■□□□□ 0.49
CIRBP-208ENST00000586548 OR51B2Q9Y5P1 312 aa18.09■□□□□ 0.49
CIRBP-208ENST00000586548 IFNA10P01566 189 aa18.08■□□□□ 0.48
CIRBP-208ENST00000586548 MC5RP33032 325 aa18.08■□□□□ 0.48
CIRBP-208ENST00000586548 RSG1Q9BU20 258 aa18.08■□□□□ 0.48
CIRBP-208ENST00000586548 FKBP11Q9NYL4 201 aa18.08■□□□□ 0.48
CIRBP-208ENST00000586548 ONECUT1Q9UBC0 465 aa18.08■□□□□ 0.48
CIRBP-208ENST00000586548 FBXO7Q9Y3I1 522 aa18.08■□□□□ 0.48
CIRBP-208ENST00000586548 TIMM9Q9Y5J7 89 aa18.08■□□□□ 0.48
CIRBP-208ENST00000586548 TMEM218A2RU14 115 aa18.07■□□□□ 0.48
CIRBP-208ENST00000586548 NDUFS7O75251 213 aa18.07■□□□□ 0.48
CIRBP-208ENST00000586548 KBTBD11O94819 623 aa18.07■□□□□ 0.48
CIRBP-208ENST00000586548 SRSF3P84103 164 aaKnown RBP18.07■□□□□ 0.48
CIRBP-208ENST00000586548 LFNGQ8NES3 379 aa18.07■□□□□ 0.48
CIRBP-208ENST00000586548 RBMXL1Q96E39 390 aaKnown RBP18.07■□□□□ 0.48
CIRBP-208ENST00000586548 ENY2Q9NPA8 101 aa18.07■□□□□ 0.48
CIRBP-208ENST00000586548 AMMECR1Q9Y4X0 333 aaPredicted RBP18.07■□□□□ 0.48
CIRBP-208ENST00000586548 KMT2BQ9UMN6 2715 aaPredicted RBP18.07■□□□□ 0.48
CIRBP-208ENST00000586548 CFAP46Q8IYW2 2715 aa18.07■□□□□ 0.48
CIRBP-208ENST00000586548 LOC105371242A0A075B767 164 aa18.06■□□□□ 0.48
CIRBP-208ENST00000586548 PRB1P04280 392 aa18.06■□□□□ 0.48
CIRBP-208ENST00000586548 SNCAP37840 140 aa18.06■□□□□ 0.48
CIRBP-208ENST00000586548 SERF2P84101 59 aa18.06■□□□□ 0.48
CIRBP-208ENST00000586548 AKR1C1Q04828 323 aa18.06■□□□□ 0.48
CIRBP-208ENST00000586548 NARFLQ9H6Q4 476 aa18.06■□□□□ 0.48
CIRBP-208ENST00000586548 TREM1Q9NP99 234 aa18.06■□□□□ 0.48
CIRBP-208ENST00000586548 M0R1W7 72 aa18.06■□□□□ 0.48
CIRBP-208ENST00000586548 OVOL3O00110 214 aa18.06■□□□□ 0.48
CIRBP-208ENST00000586548 AGPAT2O15120 278 aa18.06■□□□□ 0.48
CIRBP-208ENST00000586548 OR4A5Q8NH83 315 aa18.06■□□□□ 0.48
CIRBP-208ENST00000586548 VSTM2AQ8TAG5 236 aa18.06■□□□□ 0.48
CIRBP-208ENST00000586548 ZFYVE26Q68DK2 2539 aa18.05■□□□□ 0.48
CIRBP-208ENST00000586548 BUB1B-PAK6H3BSN5 160 aa18.05■□□□□ 0.48
CIRBP-208ENST00000586548 CD5P06127 495 aa18.05■□□□□ 0.48
CIRBP-208ENST00000586548 DVL1P1P54792 670 aaPredicted RBP18.05■□□□□ 0.48
CIRBP-208ENST00000586548 DLX1P56177 255 aa18.05■□□□□ 0.48
CIRBP-208ENST00000586548 RPS16P62249 146 aaKnown RBP18.05■□□□□ 0.48
CIRBP-208ENST00000586548 RAB11AP62491 216 aa18.05■□□□□ 0.48
CIRBP-208ENST00000586548 PRCDQ00LT1 54 aa18.05■□□□□ 0.48
CIRBP-208ENST00000586548 TLE4Q04727 773 aa18.05■□□□□ 0.48
CIRBP-208ENST00000586548 CENPVQ7Z7K6 275 aaPredicted RBP18.05■□□□□ 0.48
CIRBP-208ENST00000586548 Q8N7P7 452 aa18.05■□□□□ 0.48
CIRBP-208ENST00000586548 OR5B3Q8NH48 314 aa18.05■□□□□ 0.48
CIRBP-208ENST00000586548 MS4A7Q9GZW8 240 aaPredicted RBP18.05■□□□□ 0.48
CIRBP-208ENST00000586548 TMEM231Q9H6L2 316 aa18.05■□□□□ 0.48
CIRBP-208ENST00000586548 RNASEK-C17orf49H0YIS7 233 aa18.04■□□□□ 0.48
CIRBP-208ENST00000586548 H2AFB1P0C5Y9 115 aa18.04■□□□□ 0.48
CIRBP-208ENST00000586548 USF1P22415 310 aaPredicted RBP18.04■□□□□ 0.48
CIRBP-208ENST00000586548 COX7A1P24310 79 aa18.04■□□□□ 0.48
CIRBP-208ENST00000586548 ETV3LQ6ZN32 361 aa18.04■□□□□ 0.48
CIRBP-208ENST00000586548 GGACTQ9BVM4 153 aa18.04■□□□□ 0.48
CIRBP-208ENST00000586548 FAM96BQ9Y3D0 163 aa18.04■□□□□ 0.48
CIRBP-208ENST00000586548 BTBD17A6NE02 478 aa18.03■□□□□ 0.48
CIRBP-208ENST00000586548 RRHO14718 337 aa18.03■□□□□ 0.48
CIRBP-208ENST00000586548 FGF7P21781 194 aa18.03■□□□□ 0.48
CIRBP-208ENST00000586548 OR4P4Q8NGL7 312 aa18.03■□□□□ 0.48
CIRBP-208ENST00000586548 TMEM167AQ8TBQ9 72 aa18.03■□□□□ 0.48
CIRBP-208ENST00000586548 PLEKHA3Q9HB20 300 aa18.03■□□□□ 0.48
CIRBP-208ENST00000586548 KLF2Q9Y5W3 355 aaPredicted RBP18.03■□□□□ 0.48
CIRBP-208ENST00000586548 TEX50A0A1B0GTY4 177 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 155.1 ms