RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 PLEKHA3Q9HB20 300 aa8.81□□□□□ -1
LIG3-207ENST00000586119 ZNF221Q9UK13 617 aa8.81□□□□□ -1
LIG3-207ENST00000586119 MRPS7Q9Y2R9 242 aaKnown RBP8.81□□□□□ -1
LIG3-207ENST00000586119 A0A0G2JLM5 398 aa8.8□□□□□ -1
LIG3-207ENST00000586119 MSGN1A6NI15 193 aa8.8□□□□□ -1
LIG3-207ENST00000586119 ZNF785A8K8V0 405 aa8.8□□□□□ -1
LIG3-207ENST00000586119 H0Y980 276 aa8.8□□□□□ -1
LIG3-207ENST00000586119 CTDSPLO15194 276 aa8.8□□□□□ -1
LIG3-207ENST00000586119 SSX5O60225 188 aa8.8□□□□□ -1
LIG3-207ENST00000586119 SPDEFO95238 335 aa8.8□□□□□ -1
LIG3-207ENST00000586119 CD7P09564 240 aa8.8□□□□□ -1
LIG3-207ENST00000586119 CTXN2P0C2S0 81 aa8.8□□□□□ -1
LIG3-207ENST00000586119 GSTT2P0CG29 244 aa8.8□□□□□ -1
LIG3-207ENST00000586119 GSTT2BP0CG30 244 aa8.8□□□□□ -1
LIG3-207ENST00000586119 IGSF11Q5DX21 431 aa8.8□□□□□ -1
LIG3-207ENST00000586119 HOGA1Q86XE5 327 aa8.8□□□□□ -1
LIG3-207ENST00000586119 DEFB125Q8N687 156 aa8.8□□□□□ -1
LIG3-207ENST00000586119 GPX8Q8TED1 209 aa8.8□□□□□ -1
LIG3-207ENST00000586119 NUDCD2Q8WVJ2 157 aa8.8□□□□□ -1
LIG3-207ENST00000586119 EDARADDQ8WWZ3 215 aa8.8□□□□□ -1
LIG3-207ENST00000586119 MAFIPQ8WZ33 124 aa8.8□□□□□ -1
LIG3-207ENST00000586119 SOSTQ9BQB4 213 aa8.8□□□□□ -1
LIG3-207ENST00000586119 SDHAF2Q9NX18 166 aa8.8□□□□□ -1
LIG3-207ENST00000586119 COA4Q9NYJ1 87 aa8.8□□□□□ -1
LIG3-207ENST00000586119 ANAPC10Q9UM13 185 aa8.8□□□□□ -1
LIG3-207ENST00000586119 RBMY1BA6NDE4 496 aaKnown RBP8.79□□□□□ -1
LIG3-207ENST00000586119 RBMY1EA6NEQ0 496 aaKnown RBP8.79□□□□□ -1
LIG3-207ENST00000586119 FABP12A6NFH5 140 aa8.79□□□□□ -1
LIG3-207ENST00000586119 H3BUA1 57 aa8.79□□□□□ -1
LIG3-207ENST00000586119 FABP7O15540 132 aa8.79□□□□□ -1
LIG3-207ENST00000586119 APOA2P02652 100 aa8.79□□□□□ -1
LIG3-207ENST00000586119 IFNA6P05013 189 aa8.79□□□□□ -1
LIG3-207ENST00000586119 RBMY1DP0C7P1 496 aaKnown RBP8.79□□□□□ -1
LIG3-207ENST00000586119 NAT1P18440 290 aa8.79□□□□□ -1
LIG3-207ENST00000586119 ETV6P41212 452 aa8.79□□□□□ -1
LIG3-207ENST00000586119 SSBP1Q04837 148 aaKnown RBP8.79□□□□□ -1
LIG3-207ENST00000586119 IDO2Q6ZQW0 420 aa8.79□□□□□ -1
LIG3-207ENST00000586119 CCDC190Q86UF4 302 aa8.79□□□□□ -1
LIG3-207ENST00000586119 SNX29P2Q8IUI4 249 aa8.79□□□□□ -1
LIG3-207ENST00000586119 ADAD2Q8NCV1 583 aaKnown RBP8.79□□□□□ -1
LIG3-207ENST00000586119 HARBI1Q96MB7 349 aa8.79□□□□□ -1
LIG3-207ENST00000586119 ABHD1Q96SE0 405 aa8.79□□□□□ -1
LIG3-207ENST00000586119 CABLES2Q9BTV7 478 aa8.79□□□□□ -1
LIG3-207ENST00000586119 ST6GALNAC5Q9BVH7 336 aa8.79□□□□□ -1
LIG3-207ENST00000586119 ELF5Q9UKW6 265 aaPredicted RBP8.79□□□□□ -1
LIG3-207ENST00000586119 GABARAPH6UMI1 98 aa8.78□□□□□ -1
LIG3-207ENST00000586119 J3QRK9 145 aa8.78□□□□□ -1
LIG3-207ENST00000586119 BMPR1BO00238 502 aa8.78□□□□□ -1
LIG3-207ENST00000586119 BET1O15155 118 aa8.78□□□□□ -1
LIG3-207ENST00000586119 BRI3O95415 125 aa8.78□□□□□ -1
LIG3-207ENST00000586119 RCVRNP35243 200 aa8.78□□□□□ -1
LIG3-207ENST00000586119 TAGLNQ01995 201 aaKnown RBP8.78□□□□□ -1
LIG3-207ENST00000586119 ZNF45Q02386 682 aa8.78□□□□□ -1
LIG3-207ENST00000586119 IL18Q14116 193 aa8.78□□□□□ -1
LIG3-207ENST00000586119 RPEL1Q2QD12 228 aa8.78□□□□□ -1
LIG3-207ENST00000586119 CD300EQ496F6 205 aaPredicted RBP8.78□□□□□ -1
LIG3-207ENST00000586119 SPANXN2Q5MJ10 180 aa8.78□□□□□ -1
LIG3-207ENST00000586119 C19orf35Q6ZS72 473 aa8.78□□□□□ -1
LIG3-207ENST00000586119 BEST4Q8NFU0 473 aa8.78□□□□□ -1
LIG3-207ENST00000586119 FCAMRQ8WWV6 532 aa8.78□□□□□ -1
LIG3-207ENST00000586119 OR2D2Q9H210 308 aa8.78□□□□□ -1
LIG3-207ENST00000586119 IFT46Q9NQC8 304 aa8.78□□□□□ -1
LIG3-207ENST00000586119 ZNF230Q9UIE0 474 aaPredicted RBP8.78□□□□□ -1
LIG3-207ENST00000586119 ANXA10Q9UJ72 324 aa8.78□□□□□ -1
LIG3-207ENST00000586119 IGKV1D-8A0A087WSZ0 117 aa8.77□□□□□ -1.01
LIG3-207ENST00000586119 TRBV6-7A0A0A0MS04 114 aa8.77□□□□□ -1.01
LIG3-207ENST00000586119 SHOXO15266 292 aa8.77□□□□□ -1.01
LIG3-207ENST00000586119 GSTZ1O43708 216 aaPredicted RBP8.77□□□□□ -1.01
LIG3-207ENST00000586119 HLA-AP01891 365 aaKnown RBP8.77□□□□□ -1.01
LIG3-207ENST00000586119 LGALS7P47929 136 aa8.77□□□□□ -1.01
LIG3-207ENST00000586119 CD81P60033 236 aa8.77□□□□□ -1.01
LIG3-207ENST00000586119 TNXAQ16473 311 aa8.77□□□□□ -1.01
LIG3-207ENST00000586119 TMEM177Q53S58 311 aa8.77□□□□□ -1.01
LIG3-207ENST00000586119 C10orf55Q5SWW7 151 aa8.77□□□□□ -1.01
LIG3-207ENST00000586119 LCN12Q6JVE5 192 aa8.77□□□□□ -1.01
LIG3-207ENST00000586119 GTSCR1Q86UQ5 136 aa8.77□□□□□ -1.01
LIG3-207ENST00000586119 Q8N402 240 aa8.77□□□□□ -1.01
LIG3-207ENST00000586119 SMIM4Q8WVI0 70 aa8.77□□□□□ -1.01
LIG3-207ENST00000586119 PHB2Q99623 299 aa8.77□□□□□ -1.01
LIG3-207ENST00000586119 NEURL2Q9BR09 285 aa8.77□□□□□ -1.01
LIG3-207ENST00000586119 AKIP1Q9NQ31 210 aa8.77□□□□□ -1.01
LIG3-207ENST00000586119 TAS2R8Q9NYW2 309 aa8.77□□□□□ -1.01
LIG3-207ENST00000586119 SIGLEC8Q9NYZ4 499 aa8.77□□□□□ -1.01
LIG3-207ENST00000586119 MTFP1Q9UDX5 166 aa8.77□□□□□ -1.01
LIG3-207ENST00000586119 DMRT1Q9Y5R6 373 aa8.77□□□□□ -1.01
LIG3-207ENST00000586119 LINC00473A8K010 186 aa8.76□□□□□ -1.01
LIG3-207ENST00000586119 PPP5D1E7EU14 171 aa8.76□□□□□ -1.01
LIG3-207ENST00000586119 OR9G9P0C7N8 305 aa8.76□□□□□ -1.01
LIG3-207ENST00000586119 PTHLHP12272 177 aa8.76□□□□□ -1.01
LIG3-207ENST00000586119 TBPP20226 339 aa8.76□□□□□ -1.01
LIG3-207ENST00000586119 AADACP22760 399 aa8.76□□□□□ -1.01
LIG3-207ENST00000586119 TAS2R46P59540 309 aa8.76□□□□□ -1.01
LIG3-207ENST00000586119 ARPC4P59998 168 aa8.76□□□□□ -1.01
LIG3-207ENST00000586119 RHOGP84095 191 aa8.76□□□□□ -1.01
LIG3-207ENST00000586119 PRSS8Q16651 343 aa8.76□□□□□ -1.01
LIG3-207ENST00000586119 TATDN3Q17R31 274 aa8.76□□□□□ -1.01
LIG3-207ENST00000586119 DEFB114Q30KQ6 69 aa8.76□□□□□ -1.01
LIG3-207ENST00000586119 OR5AP2Q8NGF4 316 aa8.76□□□□□ -1.01
LIG3-207ENST00000586119 OR10J5Q8NHC4 309 aa8.76□□□□□ -1.01
LIG3-207ENST00000586119 SRSF12Q8WXF0 261 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms