RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 NOTCH1P46531 2555 aa6.86□□□□□ -1.31
ATG4D-202ENST00000585437 TRBV6-7A0A0A0MS04 114 aa6.85□□□□□ -1.31
ATG4D-202ENST00000585437 DUXBA0A1W2PPF3 345 aa6.85□□□□□ -1.31
ATG4D-202ENST00000585437 ADARB2-AS1A8MUL3 147 aa6.85□□□□□ -1.31
ATG4D-202ENST00000585437 ITGB1BP1O14713 200 aa6.85□□□□□ -1.31
ATG4D-202ENST00000585437 BCL2L11O43521 198 aa6.85□□□□□ -1.31
ATG4D-202ENST00000585437 IGKV1D-33P01593 117 aa6.85□□□□□ -1.31
ATG4D-202ENST00000585437 IGKV1-33P01594 117 aa6.85□□□□□ -1.31
ATG4D-202ENST00000585437 TMEM11P17152 192 aa6.85□□□□□ -1.31
ATG4D-202ENST00000585437 PI3P19957 117 aa6.85□□□□□ -1.31
ATG4D-202ENST00000585437 AADACP22760 399 aa6.85□□□□□ -1.31
ATG4D-202ENST00000585437 CD1BP29016 333 aa6.85□□□□□ -1.31
ATG4D-202ENST00000585437 PPP1CCP36873 323 aaKnown RBP6.85□□□□□ -1.31
ATG4D-202ENST00000585437 VDAC2P45880 294 aaPredicted RBP6.85□□□□□ -1.31
ATG4D-202ENST00000585437 REG1BP48304 166 aa6.85□□□□□ -1.31
ATG4D-202ENST00000585437 RND3P61587 244 aa6.85□□□□□ -1.31
ATG4D-202ENST00000585437 ANKRD55Q3KP44 614 aa6.85□□□□□ -1.31
ATG4D-202ENST00000585437 LRRC37A5PQ49AS3 106 aa6.85□□□□□ -1.31
ATG4D-202ENST00000585437 FAM71F2Q6NXP2 309 aa6.85□□□□□ -1.31
ATG4D-202ENST00000585437 PRSS54Q6PEW0 395 aa6.85□□□□□ -1.31
ATG4D-202ENST00000585437 ZNF833PQ6ZTB9 187 aa6.85□□□□□ -1.31
ATG4D-202ENST00000585437 TGIF2LXQ8IUE1 241 aa6.85□□□□□ -1.31
ATG4D-202ENST00000585437 CMTM1Q8IZ96 169 aa6.85□□□□□ -1.31
ATG4D-202ENST00000585437 LGI3Q8N145 548 aa6.85□□□□□ -1.31
ATG4D-202ENST00000585437 LRTM2Q8N967 370 aa6.85□□□□□ -1.31
ATG4D-202ENST00000585437 OR52L2PQ8NGH6 319 aa6.85□□□□□ -1.31
ATG4D-202ENST00000585437 SCARB1Q8WTV0 552 aa6.85□□□□□ -1.31
ATG4D-202ENST00000585437 PHYHIPLQ96FC7 376 aa6.85□□□□□ -1.31
ATG4D-202ENST00000585437 EAF1Q96JC9 268 aaPredicted RBP6.85□□□□□ -1.31
ATG4D-202ENST00000585437 ABHD14AQ9BUJ0 271 aa6.85□□□□□ -1.31
ATG4D-202ENST00000585437 IFI27L2Q9H2X8 130 aa6.85□□□□□ -1.31
ATG4D-202ENST00000585437 MBD2Q9UBB5 411 aa6.85□□□□□ -1.31
ATG4D-202ENST00000585437 SAA2-SAA4A0A096LPE2 208 aa6.84□□□□□ -1.31
ATG4D-202ENST00000585437 LINC00862A6NCI5 91 aa6.84□□□□□ -1.31
ATG4D-202ENST00000585437 GPR31O00270 319 aa6.84□□□□□ -1.31
ATG4D-202ENST00000585437 FBXO24O75426 580 aa6.84□□□□□ -1.31
ATG4D-202ENST00000585437 TUSC2O75896 110 aa6.84□□□□□ -1.31
ATG4D-202ENST00000585437 RLN2P04090 185 aa6.84□□□□□ -1.31
ATG4D-202ENST00000585437 SAA2P0DJI9 122 aaPredicted RBP6.84□□□□□ -1.31
ATG4D-202ENST00000585437 CD28P10747 220 aa6.84□□□□□ -1.31
ATG4D-202ENST00000585437 LYL1P12980 280 aa6.84□□□□□ -1.31
ATG4D-202ENST00000585437 EIF5AP63241 154 aaKnown RBP6.84□□□□□ -1.31
ATG4D-202ENST00000585437 FAM71E2Q8N5Q1 922 aa6.84□□□□□ -1.31
ATG4D-202ENST00000585437 OR10J5Q8NHC4 309 aa6.84□□□□□ -1.31
ATG4D-202ENST00000585437 DCUN1D4Q92564 292 aa6.84□□□□□ -1.31
ATG4D-202ENST00000585437 SEC22AQ96IW7 307 aa6.84□□□□□ -1.31
ATG4D-202ENST00000585437 SPIN2AQ99865 258 aa6.84□□□□□ -1.31
ATG4D-202ENST00000585437 ARPC5LQ9BPX5 153 aa6.84□□□□□ -1.31
ATG4D-202ENST00000585437 SPIN2BQ9BPZ2 258 aa6.84□□□□□ -1.31
ATG4D-202ENST00000585437 ZNF251Q9BRH9 671 aa6.84□□□□□ -1.31
ATG4D-202ENST00000585437 AGMATQ9BSE5 352 aa6.84□□□□□ -1.31
ATG4D-202ENST00000585437 TOLLIPQ9H0E2 274 aa6.84□□□□□ -1.31
ATG4D-202ENST00000585437 RDH8Q9NYR8 311 aa6.84□□□□□ -1.31
ATG4D-202ENST00000585437 TMED3Q9Y3Q3 217 aa6.84□□□□□ -1.31
ATG4D-202ENST00000585437 IGHV3-72A0A0B4J1Y9 119 aa6.83□□□□□ -1.32
ATG4D-202ENST00000585437 IGKV1-6A0A0C4DH72 117 aa6.83□□□□□ -1.32
ATG4D-202ENST00000585437 C3orf85A0A1B0GTC6 90 aa6.83□□□□□ -1.32
ATG4D-202ENST00000585437 RNF222A6NCQ9 220 aa6.83□□□□□ -1.32
ATG4D-202ENST00000585437 SH2D7A6NKC9 451 aaPredicted RBP6.83□□□□□ -1.32
ATG4D-202ENST00000585437 BET1O15155 118 aa6.83□□□□□ -1.32
ATG4D-202ENST00000585437 ADAP1O75689 374 aa6.83□□□□□ -1.32
ATG4D-202ENST00000585437 IGHG2P01859 326 aa6.83□□□□□ -1.32
ATG4D-202ENST00000585437 HOXB5P09067 269 aa6.83□□□□□ -1.32
ATG4D-202ENST00000585437 OR5AC1P0C628 307 aa6.83□□□□□ -1.32
ATG4D-202ENST00000585437 HES1Q14469 280 aa6.83□□□□□ -1.32
ATG4D-202ENST00000585437 TMEM187Q14656 261 aa6.83□□□□□ -1.32
ATG4D-202ENST00000585437 IAH1Q2TAA2 248 aaPredicted RBP6.83□□□□□ -1.32
ATG4D-202ENST00000585437 IGSF11Q5DX21 431 aa6.83□□□□□ -1.32
ATG4D-202ENST00000585437 TCTEX1D4Q5JR98 221 aa6.83□□□□□ -1.32
ATG4D-202ENST00000585437 HIST2H2BDQ6DRA6 164 aa6.83□□□□□ -1.32
ATG4D-202ENST00000585437 MOB3BQ86TA1 216 aa6.83□□□□□ -1.32
ATG4D-202ENST00000585437 NDUFA11Q86Y39 141 aa6.83□□□□□ -1.32
ATG4D-202ENST00000585437 LYG1Q8N1E2 194 aa6.83□□□□□ -1.32
ATG4D-202ENST00000585437 C11orf44Q8N8P7 122 aa6.83□□□□□ -1.32
ATG4D-202ENST00000585437 Q8N9W7 124 aa6.83□□□□□ -1.32
ATG4D-202ENST00000585437 OR2T10Q8NGZ9 312 aa6.83□□□□□ -1.32
ATG4D-202ENST00000585437 IL1F10Q8WWZ1 152 aa6.83□□□□□ -1.32
ATG4D-202ENST00000585437 IL22RA2Q969J5 263 aa6.83□□□□□ -1.32
ATG4D-202ENST00000585437 NABP2Q9BQ15 211 aa6.83□□□□□ -1.32
ATG4D-202ENST00000585437 SLC5A7Q9GZV3 580 aa6.83□□□□□ -1.32
ATG4D-202ENST00000585437 PARP12Q9H0J9 701 aaKnown RBP6.83□□□□□ -1.32
ATG4D-202ENST00000585437 LIN7CQ9NUP9 197 aaKnown RBP6.83□□□□□ -1.32
ATG4D-202ENST00000585437 ZNF580Q9UK33 172 aa6.83□□□□□ -1.32
ATG4D-202ENST00000585437 OR2W1Q9Y3N9 320 aa6.83□□□□□ -1.32
ATG4D-202ENST00000585437 RPS10-NUDT3A0A1W2PQS6 291 aa6.82□□□□□ -1.32
ATG4D-202ENST00000585437 TAAR5O14804 337 aa6.82□□□□□ -1.32
ATG4D-202ENST00000585437 MPPED1O15442 326 aa6.82□□□□□ -1.32
ATG4D-202ENST00000585437 ST8SIA5O15466 376 aa6.82□□□□□ -1.32
ATG4D-202ENST00000585437 CDS2O95674 445 aa6.82□□□□□ -1.32
ATG4D-202ENST00000585437 MOSP00540 346 aa6.82□□□□□ -1.32
ATG4D-202ENST00000585437 SCTP09683 121 aa6.82□□□□□ -1.32
ATG4D-202ENST00000585437 TPT1P13693 172 aaKnown RBP6.82□□□□□ -1.32
ATG4D-202ENST00000585437 S100A10P60903 97 aa6.82□□□□□ -1.32
ATG4D-202ENST00000585437 HNF4GQ14541 408 aa6.82□□□□□ -1.32
ATG4D-202ENST00000585437 PHLDA2Q53GA4 152 aa6.82□□□□□ -1.32
ATG4D-202ENST00000585437 ARSJQ5FYB0 599 aaPredicted RBP6.82□□□□□ -1.32
ATG4D-202ENST00000585437 GGNBP1Q5YKI7 109 aa6.82□□□□□ -1.32
ATG4D-202ENST00000585437 H1FOOQ8IZA3 346 aaPredicted RBP6.82□□□□□ -1.32
ATG4D-202ENST00000585437 OR5AU1Q8NGC0 362 aa6.82□□□□□ -1.32
ATG4D-202ENST00000585437 STOML3Q8TAV4 291 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms