RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 PALMDQ9NP74 551 aa11.55□□□□□ -0.56
SCAMP4-209ENST00000585335 PARP11Q9NR21 331 aa11.55□□□□□ -0.56
SCAMP4-209ENST00000585335 TPSG1Q9NRR2 321 aa11.55□□□□□ -0.56
SCAMP4-209ENST00000585335 TMEM140Q9NV12 185 aa11.55□□□□□ -0.56
SCAMP4-209ENST00000585335 NUBP2Q9Y5Y2 271 aa11.55□□□□□ -0.56
SCAMP4-209ENST00000585335 CUBNO60494 3623 aa11.55□□□□□ -0.56
SCAMP4-209ENST00000585335 IGHV7-81A0A0B4J1V7 117 aa11.54□□□□□ -0.56
SCAMP4-209ENST00000585335 MAS1LP35410 378 aa11.54□□□□□ -0.56
SCAMP4-209ENST00000585335 G6PCP35575 357 aa11.54□□□□□ -0.56
SCAMP4-209ENST00000585335 COMPP49747 757 aaPredicted RBP11.54□□□□□ -0.56
SCAMP4-209ENST00000585335 SLC35B1P78383 322 aa11.54□□□□□ -0.56
SCAMP4-209ENST00000585335 CX3CL1P78423 397 aa11.54□□□□□ -0.56
SCAMP4-209ENST00000585335 IFITM3Q01628 133 aa11.54□□□□□ -0.56
SCAMP4-209ENST00000585335 FXYD3Q14802 87 aa11.54□□□□□ -0.56
SCAMP4-209ENST00000585335 TNXAQ16473 311 aa11.54□□□□□ -0.56
SCAMP4-209ENST00000585335 Q6ZS46 218 aa11.54□□□□□ -0.56
SCAMP4-209ENST00000585335 CADM3Q8N126 398 aa11.54□□□□□ -0.56
SCAMP4-209ENST00000585335 TMEM167AQ8TBQ9 72 aa11.54□□□□□ -0.56
SCAMP4-209ENST00000585335 CHPT1Q8WUD6 406 aa11.54□□□□□ -0.56
SCAMP4-209ENST00000585335 ARPC1AQ92747 370 aa11.54□□□□□ -0.56
SCAMP4-209ENST00000585335 RBPMSQ93062 196 aaKnown RBP11.54□□□□□ -0.56
SCAMP4-209ENST00000585335 HSPB9Q9BQS6 159 aa11.54□□□□□ -0.56
SCAMP4-209ENST00000585335 NUDT15Q9NV35 164 aa11.54□□□□□ -0.56
SCAMP4-209ENST00000585335 HAX1O00165 279 aa11.53□□□□□ -0.56
SCAMP4-209ENST00000585335 FCN1O00602 326 aa11.53□□□□□ -0.56
SCAMP4-209ENST00000585335 FGF2P09038 288 aa11.53□□□□□ -0.56
SCAMP4-209ENST00000585335 VDAC1P21796 283 aa11.53□□□□□ -0.56
SCAMP4-209ENST00000585335 RAB25P57735 213 aa11.53□□□□□ -0.56
SCAMP4-209ENST00000585335 RPL8P62917 257 aaKnown RBP11.53□□□□□ -0.56
SCAMP4-209ENST00000585335 TMEM267Q0VDI3 215 aaPredicted RBP11.53□□□□□ -0.56
SCAMP4-209ENST00000585335 TMEM95Q3KNT9 176 aa11.53□□□□□ -0.56
SCAMP4-209ENST00000585335 C4orf46Q504U0 113 aa11.53□□□□□ -0.56
SCAMP4-209ENST00000585335 CENPVQ7Z7K6 275 aaPredicted RBP11.53□□□□□ -0.56
SCAMP4-209ENST00000585335 LGI3Q8N145 548 aa11.53□□□□□ -0.56
SCAMP4-209ENST00000585335 KLHDC1Q8N7A1 406 aa11.53□□□□□ -0.56
SCAMP4-209ENST00000585335 GRPEL2Q8TAA5 225 aa11.53□□□□□ -0.56
SCAMP4-209ENST00000585335 GLYATL2Q8WU03 294 aa11.53□□□□□ -0.56
SCAMP4-209ENST00000585335 IL22RA2Q969J5 263 aa11.53□□□□□ -0.56
SCAMP4-209ENST00000585335 ZNF430Q9H8G1 570 aaPredicted RBP11.53□□□□□ -0.56
SCAMP4-209ENST00000585335 SERTAD4Q9NUC0 356 aa11.53□□□□□ -0.56
SCAMP4-209ENST00000585335 ZNF580Q9UK33 172 aa11.53□□□□□ -0.56
SCAMP4-209ENST00000585335 FLVCR2Q9UPI3 526 aa11.53□□□□□ -0.56
SCAMP4-209ENST00000585335 TRAV6A0A075B6T7 132 aa11.52□□□□□ -0.57
SCAMP4-209ENST00000585335 UPK2O00526 184 aa11.52□□□□□ -0.57
SCAMP4-209ENST00000585335 ATP6V0E1O15342 81 aa11.52□□□□□ -0.57
SCAMP4-209ENST00000585335 SFT2D2O95562 160 aa11.52□□□□□ -0.57
SCAMP4-209ENST00000585335 CDS2O95674 445 aa11.52□□□□□ -0.57
SCAMP4-209ENST00000585335 HLA-AP01891 365 aaKnown RBP11.52□□□□□ -0.57
SCAMP4-209ENST00000585335 IGF1P05019 195 aa11.52□□□□□ -0.57
SCAMP4-209ENST00000585335 H2AFB2P0C5Z0 115 aa11.52□□□□□ -0.57
SCAMP4-209ENST00000585335 PJVKQ0ZLH3 352 aa11.52□□□□□ -0.57
SCAMP4-209ENST00000585335 PPP1R1AQ13522 171 aa11.52□□□□□ -0.57
SCAMP4-209ENST00000585335 DCTN2Q13561 401 aaKnown RBP11.52□□□□□ -0.57
SCAMP4-209ENST00000585335 TMEM187Q14656 261 aa11.52□□□□□ -0.57
SCAMP4-209ENST00000585335 TMEM268Q5VZI3 342 aa11.52□□□□□ -0.57
SCAMP4-209ENST00000585335 PLET1Q6UQ28 207 aa11.52□□□□□ -0.57
SCAMP4-209ENST00000585335 FAM219AQ8IW50 185 aa11.52□□□□□ -0.57
SCAMP4-209ENST00000585335 STPG2Q8N412 459 aa11.52□□□□□ -0.57
SCAMP4-209ENST00000585335 C3orf56Q8N813 242 aa11.52□□□□□ -0.57
SCAMP4-209ENST00000585335 OR4A16Q8NH70 328 aa11.52□□□□□ -0.57
SCAMP4-209ENST00000585335 SEC22AQ96IW7 307 aa11.52□□□□□ -0.57
SCAMP4-209ENST00000585335 PHB2Q99623 299 aa11.52□□□□□ -0.57
SCAMP4-209ENST00000585335 SPIN2AQ99865 258 aa11.52□□□□□ -0.57
SCAMP4-209ENST00000585335 SPIN2BQ9BPZ2 258 aa11.52□□□□□ -0.57
SCAMP4-209ENST00000585335 COMMD5Q9GZQ3 224 aa11.52□□□□□ -0.57
SCAMP4-209ENST00000585335 FKBP11Q9NYL4 201 aa11.52□□□□□ -0.57
SCAMP4-209ENST00000585335 PRNDQ9UKY0 176 aa11.52□□□□□ -0.57
SCAMP4-209ENST00000585335 ATRQ13535 2644 aa11.51□□□□□ -0.57
SCAMP4-209ENST00000585335 TRAV41A0A0B4J266 112 aa11.51□□□□□ -0.57
SCAMP4-209ENST00000585335 PSMB11A5LHX3 300 aa11.51□□□□□ -0.57
SCAMP4-209ENST00000585335 RBMXL2O75526 392 aaKnown RBP11.51□□□□□ -0.57
SCAMP4-209ENST00000585335 IGKV1-39P01597 117 aa11.51□□□□□ -0.57
SCAMP4-209ENST00000585335 IGKV1D-39P04432 117 aa11.51□□□□□ -0.57
SCAMP4-209ENST00000585335 OR4E1P0C645 316 aa11.51□□□□□ -0.57
SCAMP4-209ENST00000585335 HLA-GP17693 338 aa11.51□□□□□ -0.57
SCAMP4-209ENST00000585335 ANXA7P20073 488 aaKnown RBP11.51□□□□□ -0.57
SCAMP4-209ENST00000585335 PROK1P58294 105 aa11.51□□□□□ -0.57
SCAMP4-209ENST00000585335 SUPT4H1P63272 117 aaKnown RBP11.51□□□□□ -0.57
SCAMP4-209ENST00000585335 COMMD1Q8N668 190 aa11.51□□□□□ -0.57
SCAMP4-209ENST00000585335 SGMS2Q8NHU3 365 aa11.51□□□□□ -0.57
SCAMP4-209ENST00000585335 COQ8AQ8NI60 647 aa11.51□□□□□ -0.57
SCAMP4-209ENST00000585335 CASTOR1Q8WTX7 329 aa11.51□□□□□ -0.57
SCAMP4-209ENST00000585335 TMEM68Q96MH6 324 aa11.51□□□□□ -0.57
SCAMP4-209ENST00000585335 TMEM56Q96MV1 263 aa11.51□□□□□ -0.57
SCAMP4-209ENST00000585335 ALX4Q9H161 411 aaPredicted RBP11.51□□□□□ -0.57
SCAMP4-209ENST00000585335 TMEM56-RWDD3S4R434 201 aa11.51□□□□□ -0.57
SCAMP4-209ENST00000585335 DUXBA0A1W2PPF3 345 aa11.5□□□□□ -0.57
SCAMP4-209ENST00000585335 PTTG1O95997 202 aa11.5□□□□□ -0.57
SCAMP4-209ENST00000585335 RPL27AP46776 148 aaKnown RBP11.5□□□□□ -0.57
SCAMP4-209ENST00000585335 ECSCRQ19T08 205 aa11.5□□□□□ -0.57
SCAMP4-209ENST00000585335 NRARPQ7Z6K4 114 aa11.5□□□□□ -0.57
SCAMP4-209ENST00000585335 LYG2Q86SG7 212 aa11.5□□□□□ -0.57
SCAMP4-209ENST00000585335 SELENOHQ8IZQ5 122 aaKnown RBP11.5□□□□□ -0.57
SCAMP4-209ENST00000585335 DUSP18Q8NEJ0 188 aa11.5□□□□□ -0.57
SCAMP4-209ENST00000585335 OR4X2Q8NGF9 303 aa11.5□□□□□ -0.57
SCAMP4-209ENST00000585335 WFDC12Q8WWY7 111 aa11.5□□□□□ -0.57
SCAMP4-209ENST00000585335 SRSF12Q8WXF0 261 aaKnown RBP11.5□□□□□ -0.57
SCAMP4-209ENST00000585335 NOL4LQ96MY1 436 aaPredicted RBP11.5□□□□□ -0.57
SCAMP4-209ENST00000585335 WNT10AQ9GZT5 417 aa11.5□□□□□ -0.57
SCAMP4-209ENST00000585335 LINC00527Q9UJ94 153 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms