RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 B9D2Q9BPU9 175 aa9.56□□□□□ -0.88
SS18-225ENST00000585121 SLC5A7Q9GZV3 580 aa9.56□□□□□ -0.88
SS18-225ENST00000585121 ZNF430Q9H8G1 570 aaPredicted RBP9.56□□□□□ -0.88
SS18-225ENST00000585121 PALMDQ9NP74 551 aa9.56□□□□□ -0.88
SS18-225ENST00000585121 TAS2R8Q9NYW2 309 aa9.56□□□□□ -0.88
SS18-225ENST00000585121 COMMD3Q9UBI1 195 aa9.56□□□□□ -0.88
SS18-225ENST00000585121 OR2A4O95047 310 aa9.55□□□□□ -0.88
SS18-225ENST00000585121 PPYP01298 95 aa9.55□□□□□ -0.88
SS18-225ENST00000585121 IGLV2-14P01704 120 aa9.55□□□□□ -0.88
SS18-225ENST00000585121 OR9G9P0C7N8 305 aa9.55□□□□□ -0.88
SS18-225ENST00000585121 APELAP0DMC3 54 aa9.55□□□□□ -0.88
SS18-225ENST00000585121 PTBP1P26599 531 aaKnown RBP eCLIP9.55□□□□□ -0.883e-9■■■■□ 23.3
SS18-225ENST00000585121 FXYD4P59646 89 aa9.55□□□□□ -0.88
SS18-225ENST00000585121 HERV-K104P61576 105 aa9.55□□□□□ -0.88
SS18-225ENST00000585121 CATR1Q13166 79 aa9.55□□□□□ -0.88
SS18-225ENST00000585121 GIMAP1Q8WWP7 306 aa9.55□□□□□ -0.88
SS18-225ENST00000585121 OR2A7Q96R45 310 aa9.55□□□□□ -0.88
SS18-225ENST00000585121 CCL28Q9NRJ3 127 aa9.55□□□□□ -0.88
SS18-225ENST00000585121 ANKRD34BA5PLL1 514 aa9.54□□□□□ -0.88
SS18-225ENST00000585121 MEIS3P1A6NDR6 274 aa9.54□□□□□ -0.88
SS18-225ENST00000585121 TNFSF12O43508 249 aa9.54□□□□□ -0.88
SS18-225ENST00000585121 PTHLHP12272 177 aa9.54□□□□□ -0.88
SS18-225ENST00000585121 PRSS3P35030 304 aa9.54□□□□□ -0.88
SS18-225ENST00000585121 TAS2R20P59543 309 aa9.54□□□□□ -0.88
SS18-225ENST00000585121 TATDN3Q17R31 274 aa9.54□□□□□ -0.88
SS18-225ENST00000585121 ACSM6Q6P461 480 aa9.54□□□□□ -0.88
SS18-225ENST00000585121 SNAPC3Q92966 411 aa9.54□□□□□ -0.88
SS18-225ENST00000585121 MIXL1Q9H2W2 232 aa9.54□□□□□ -0.88
SS18-225ENST00000585121 EHFQ9NZC4 300 aa9.54□□□□□ -0.88
SS18-225ENST00000585121 FABP12A6NFH5 140 aa9.53□□□□□ -0.88
SS18-225ENST00000585121 FAM223BA6NKX1 122 aa9.53□□□□□ -0.88
SS18-225ENST00000585121 APOA1P02647 267 aa9.53□□□□□ -0.88
SS18-225ENST00000585121 MAS1LP35410 378 aa9.53□□□□□ -0.88
SS18-225ENST00000585121 TAS2R46P59540 309 aa9.53□□□□□ -0.88
SS18-225ENST00000585121 EIF4EBP1Q13541 118 aaPredicted RBP9.53□□□□□ -0.88
SS18-225ENST00000585121 MRGPRG-AS1Q2M3A8 158 aa9.53□□□□□ -0.88
SS18-225ENST00000585121 VAX1Q5SQQ9 334 aa9.53□□□□□ -0.88
SS18-225ENST00000585121 FAM223AQ8IWN6 122 aa9.53□□□□□ -0.88
SS18-225ENST00000585121 LAX1Q8IWV1 398 aa9.53□□□□□ -0.88
SS18-225ENST00000585121 VKORC1L1Q8N0U8 176 aa9.53□□□□□ -0.88
SS18-225ENST00000585121 SPAG16Q8N0X2 631 aa9.53□□□□□ -0.88
SS18-225ENST00000585121 ADAD2Q8NCV1 583 aaKnown RBP9.53□□□□□ -0.88
SS18-225ENST00000585121 OR5H2Q8NGV7 314 aa9.53□□□□□ -0.88
SS18-225ENST00000585121 CD300LFQ8TDQ1 290 aa9.53□□□□□ -0.88
SS18-225ENST00000585121 DIRAS2Q96HU8 199 aa9.53□□□□□ -0.88
SS18-225ENST00000585121 PEF1Q9UBV8 284 aaKnown RBP9.53□□□□□ -0.88
SS18-225ENST00000585121 DNAH9Q9NYC9 4486 aa9.53□□□□□ -0.88
SS18-225ENST00000585121 RBFOX2O43251 390 aaKnown RBP eCLIP9.52□□□□□ -0.88
SS18-225ENST00000585121 HPGDSO60760 199 aa9.52□□□□□ -0.88
SS18-225ENST00000585121 KBTBD11O94819 623 aa9.52□□□□□ -0.88
SS18-225ENST00000585121 NHLRC4P0CG21 123 aaPredicted RBP9.52□□□□□ -0.88
SS18-225ENST00000585121 RPL27AP46776 148 aaKnown RBP9.52□□□□□ -0.88
SS18-225ENST00000585121 ATP5G2Q06055 141 aa9.52□□□□□ -0.88
SS18-225ENST00000585121 ZNF343Q6P1L6 599 aa9.52□□□□□ -0.88
SS18-225ENST00000585121 SSX9Q7RTT3 188 aa9.52□□□□□ -0.88
SS18-225ENST00000585121 TMEM17Q86X19 198 aa9.52□□□□□ -0.88
SS18-225ENST00000585121 TTC9CQ8N5M4 171 aa9.52□□□□□ -0.88
SS18-225ENST00000585121 TMEM167AQ8TBQ9 72 aa9.52□□□□□ -0.88
SS18-225ENST00000585121 SOSTQ9BQB4 213 aa9.52□□□□□ -0.88
SS18-225ENST00000585121 RSRP1Q9BUV0 290 aa9.52□□□□□ -0.88
SS18-225ENST00000585121 RABL2AQ9UBK7 228 aaPredicted RBP9.52□□□□□ -0.88
SS18-225ENST00000585121 RABL2BQ9UNT1 228 aa9.52□□□□□ -0.88
SS18-225ENST00000585121 LSM4Q9Y4Z0 139 aaKnown RBP9.52□□□□□ -0.88
SS18-225ENST00000585121 SULT1C2O00338 296 aa9.51□□□□□ -0.89
SS18-225ENST00000585121 DHFRP00374 187 aa9.51□□□□□ -0.89
SS18-225ENST00000585121 HPRT1P00492 218 aa9.51□□□□□ -0.89
SS18-225ENST00000585121 RHOGP84095 191 aa9.51□□□□□ -0.89
SS18-225ENST00000585121 DYRK1AQ13627 763 aa9.51□□□□□ -0.89
SS18-225ENST00000585121 RPEL1Q2QD12 228 aa9.51□□□□□ -0.89
SS18-225ENST00000585121 FAM209BQ5JX69 171 aa9.51□□□□□ -0.89
SS18-225ENST00000585121 AADACL3Q5VUY0 350 aa9.51□□□□□ -0.89
SS18-225ENST00000585121 DHRS11Q6UWP2 260 aa9.51□□□□□ -0.89
SS18-225ENST00000585121 PUSL1Q8N0Z8 303 aaKnown RBP9.51□□□□□ -0.89
SS18-225ENST00000585121 OR4A5Q8NH83 315 aa9.51□□□□□ -0.89
SS18-225ENST00000585121 FYTTD1Q96QD9 318 aaKnown RBP9.51□□□□□ -0.89
SS18-225ENST00000585121 GPHA2Q96T91 129 aa9.51□□□□□ -0.89
SS18-225ENST00000585121 ZNF2Q9BSG1 426 aaPredicted RBP9.51□□□□□ -0.89
SS18-225ENST00000585121 CCDC32Q9BV29 185 aa9.51□□□□□ -0.89
SS18-225ENST00000585121 HRASLSQ9HDD0 168 aa9.51□□□□□ -0.89
SS18-225ENST00000585121 SMAD5-AS1Q9Y6J3 95 aa9.51□□□□□ -0.89
SS18-225ENST00000585121 TNCP24821 2201 aa9.51□□□□□ -0.89
SS18-225ENST00000585121 TPPPO94811 219 aa9.51□□□□□ -0.89
SS18-225ENST00000585121 PMP2P02689 132 aa9.51□□□□□ -0.89
SS18-225ENST00000585121 EIF4EP06730 217 aaKnown RBP9.51□□□□□ -0.89
SS18-225ENST00000585121 NQO2P16083 231 aa9.51□□□□□ -0.89
SS18-225ENST00000585121 ELK1P19419 428 aa9.51□□□□□ -0.89
SS18-225ENST00000585121 S100GP29377 79 aa9.51□□□□□ -0.89
SS18-225ENST00000585121 RFX2P48378 723 aa9.51□□□□□ -0.89
SS18-225ENST00000585121 TAS2R31P59538 309 aa9.51□□□□□ -0.89
SS18-225ENST00000585121 RPL8P62917 257 aaKnown RBP9.51□□□□□ -0.89
SS18-225ENST00000585121 DEFA5Q01523 94 aa9.51□□□□□ -0.89
SS18-225ENST00000585121 KLF5Q13887 457 aaPredicted RBP9.51□□□□□ -0.89
SS18-225ENST00000585121 C10orf55Q5SWW7 151 aa9.51□□□□□ -0.89
SS18-225ENST00000585121 ZNF818PQ6ZRF7 136 aa9.51□□□□□ -0.89
SS18-225ENST00000585121 CMTM1Q8IZ96 169 aa9.51□□□□□ -0.89
SS18-225ENST00000585121 GDPD1Q8N9F7 314 aa9.51□□□□□ -0.89
SS18-225ENST00000585121 NECAP1Q8NC96 275 aa9.51□□□□□ -0.89
SS18-225ENST00000585121 OR6F1Q8NGZ6 308 aa9.51□□□□□ -0.89
SS18-225ENST00000585121 SCPEP1Q9HB40 452 aa9.51□□□□□ -0.89
SS18-225ENST00000585121 BET1LQ9NYM9 111 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms