RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 FAM210BQ96KR6 192 aa12.37□□□□□ -0.43
CDK5RAP3-236ENST00000584991 DOK5Q9P104 306 aa12.37□□□□□ -0.43
CDK5RAP3-236ENST00000584991 USF3Q68DE3 2245 aa12.37□□□□□ -0.43
CDK5RAP3-236ENST00000584991 RAI1Q7Z5J4 1906 aaPredicted RBP12.37□□□□□ -0.43
CDK5RAP3-236ENST00000584991 TRAV39A0A0B4J263 110 aa12.36□□□□□ -0.43
CDK5RAP3-236ENST00000584991 CYB5BO43169 146 aa12.36□□□□□ -0.43
CDK5RAP3-236ENST00000584991 GABRA2P47869 451 aa12.36□□□□□ -0.43
CDK5RAP3-236ENST00000584991 PSMB3P49720 205 aa12.36□□□□□ -0.43
CDK5RAP3-236ENST00000584991 PPOXP50336 477 aa12.36□□□□□ -0.43
CDK5RAP3-236ENST00000584991 WDR25Q64LD2 544 aaPredicted RBP12.36□□□□□ -0.43
CDK5RAP3-236ENST00000584991 C11orf71Q6IPW1 123 aa12.36□□□□□ -0.43
CDK5RAP3-236ENST00000584991 DEFB108BQ8NET1 73 aa12.36□□□□□ -0.43
CDK5RAP3-236ENST00000584991 EDARADDQ8WWZ3 215 aa12.36□□□□□ -0.43
CDK5RAP3-236ENST00000584991 CCL17Q92583 94 aa12.36□□□□□ -0.43
CDK5RAP3-236ENST00000584991 VSIRQ9H7M9 311 aa12.36□□□□□ -0.43
CDK5RAP3-236ENST00000584991 UBTD1Q9HAC8 227 aa12.36□□□□□ -0.43
CDK5RAP3-236ENST00000584991 FLNCQ14315 2725 aa12.36□□□□□ -0.43
CDK5RAP3-236ENST00000584991 USP9XQ93008 2570 aaPredicted RBP12.36□□□□□ -0.43
CDK5RAP3-236ENST00000584991 FAM208BQ5VWN6 2430 aa12.36□□□□□ -0.43
CDK5RAP3-236ENST00000584991 PMS2P5A8MQ11 134 aa12.36□□□□□ -0.43
CDK5RAP3-236ENST00000584991 CEBPZOSA8MTT3 80 aa12.36□□□□□ -0.43
CDK5RAP3-236ENST00000584991 C17orf112F2Z3M2 114 aa12.36□□□□□ -0.43
CDK5RAP3-236ENST00000584991 H2BFWTQ7Z2G1 175 aa12.36□□□□□ -0.43
CDK5RAP3-236ENST00000584991 RPP25LQ8N5L8 163 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-236ENST00000584991 OR1L1Q8NH94 360 aa12.36□□□□□ -0.43
CDK5RAP3-236ENST00000584991 ACTR3CQ9C0K3 210 aaPredicted RBP12.36□□□□□ -0.43
CDK5RAP3-236ENST00000584991 TMEM106BQ9NUM4 274 aa12.36□□□□□ -0.43
CDK5RAP3-236ENST00000584991 HRNRQ86YZ3 2850 aaPredicted RBP12.35□□□□□ -0.43
CDK5RAP3-236ENST00000584991 MYO18BQ8IUG5 2567 aa12.35□□□□□ -0.43
CDK5RAP3-236ENST00000584991 IGHV1-69-2A0A0G2JMI3 117 aa12.35□□□□□ -0.43
CDK5RAP3-236ENST00000584991 UBE2L5PA0A1B0GUS4 154 aa12.35□□□□□ -0.43
CDK5RAP3-236ENST00000584991 ODAMA1E959 279 aa12.35□□□□□ -0.43
CDK5RAP3-236ENST00000584991 TMEM178BH3BS89 294 aa12.35□□□□□ -0.43
CDK5RAP3-236ENST00000584991 HIST1H2BKO60814 126 aa12.35□□□□□ -0.43
CDK5RAP3-236ENST00000584991 KRASP01116 189 aa12.35□□□□□ -0.43
CDK5RAP3-236ENST00000584991 HIST1H2BJP06899 126 aa12.35□□□□□ -0.43
CDK5RAP3-236ENST00000584991 GZMHP20718 246 aa12.35□□□□□ -0.43
CDK5RAP3-236ENST00000584991 MDKP21741 143 aaPredicted RBP12.35□□□□□ -0.43
CDK5RAP3-236ENST00000584991 HIST1H2BOP23527 126 aa12.35□□□□□ -0.43
CDK5RAP3-236ENST00000584991 HIST1H2BBP33778 126 aa12.35□□□□□ -0.43
CDK5RAP3-236ENST00000584991 HIST1H2BDP58876 126 aa12.35□□□□□ -0.43
CDK5RAP3-236ENST00000584991 HIST1H2BCP62807 126 aa12.35□□□□□ -0.43
CDK5RAP3-236ENST00000584991 HIST2H2BEQ16778 126 aa12.35□□□□□ -0.43
CDK5RAP3-236ENST00000584991 TMEM241Q24JQ0 296 aa12.35□□□□□ -0.43
CDK5RAP3-236ENST00000584991 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.35□□□□□ -0.43
CDK5RAP3-236ENST00000584991 DTX2Q86UW9 622 aa12.35□□□□□ -0.43
CDK5RAP3-236ENST00000584991 HIST1H2BHQ93079 126 aa12.35□□□□□ -0.43
CDK5RAP3-236ENST00000584991 HIST1H2BNQ99877 126 aa12.35□□□□□ -0.43
CDK5RAP3-236ENST00000584991 HIST1H2BMQ99879 126 aa12.35□□□□□ -0.43
CDK5RAP3-236ENST00000584991 SPOCK3Q9BQ16 436 aa12.35□□□□□ -0.43
CDK5RAP3-236ENST00000584991 SMCO3A2RU48 225 aa12.34□□□□□ -0.43
CDK5RAP3-236ENST00000584991 SPINT2O43291 252 aa12.34□□□□□ -0.43
CDK5RAP3-236ENST00000584991 KBTBD11O94819 623 aa12.34□□□□□ -0.43
CDK5RAP3-236ENST00000584991 NDUFA6P56556 154 aa12.34□□□□□ -0.43
CDK5RAP3-236ENST00000584991 RPP30P78346 268 aaKnown RBP12.34□□□□□ -0.43
CDK5RAP3-236ENST00000584991 CR1LQ2VPA4 569 aa12.34□□□□□ -0.43
CDK5RAP3-236ENST00000584991 ZNF343Q6P1L6 599 aa12.34□□□□□ -0.43
CDK5RAP3-236ENST00000584991 ZNF709Q8N972 641 aa12.34□□□□□ -0.43
CDK5RAP3-236ENST00000584991 DTD1Q8TEA8 209 aa12.34□□□□□ -0.43
CDK5RAP3-236ENST00000584991 COQ2Q96H96 371 aa12.34□□□□□ -0.43
CDK5RAP3-236ENST00000584991 PYGO2Q9BRQ0 406 aa12.34□□□□□ -0.43
CDK5RAP3-236ENST00000584991 GGACTQ9BVM4 153 aa12.34□□□□□ -0.43
CDK5RAP3-236ENST00000584991 RAB1BQ9H0U4 201 aa12.34□□□□□ -0.43
CDK5RAP3-236ENST00000584991 MIOXQ9UGB7 285 aa12.34□□□□□ -0.43
CDK5RAP3-236ENST00000584991 DMRT1Q9Y5R6 373 aa12.34□□□□□ -0.43
CDK5RAP3-236ENST00000584991 TGIF2-C20orf24A0A0A6YYL0 155 aa12.34□□□□□ -0.43
CDK5RAP3-236ENST00000584991 RAMP3O60896 148 aa12.34□□□□□ -0.43
CDK5RAP3-236ENST00000584991 MPDU1O75352 247 aa12.34□□□□□ -0.43
CDK5RAP3-236ENST00000584991 VENTXO95231 258 aa12.34□□□□□ -0.43
CDK5RAP3-236ENST00000584991 IGHV2-70P01814 119 aa12.34□□□□□ -0.43
CDK5RAP3-236ENST00000584991 GYPAP02724 150 aa12.34□□□□□ -0.43
CDK5RAP3-236ENST00000584991 G6PCP35575 357 aa12.34□□□□□ -0.43
CDK5RAP3-236ENST00000584991 RPL30P62888 115 aaKnown RBP12.34□□□□□ -0.43
CDK5RAP3-236ENST00000584991 AESQ08117 197 aa12.34□□□□□ -0.43
CDK5RAP3-236ENST00000584991 TEX36Q5VZQ5 186 aa12.34□□□□□ -0.43
CDK5RAP3-236ENST00000584991 STUMQ69YW2 141 aa12.34□□□□□ -0.43
CDK5RAP3-236ENST00000584991 OR8G2PQ6IF36 304 aa12.34□□□□□ -0.43
CDK5RAP3-236ENST00000584991 LURAP1LQ8IV03 231 aa12.34□□□□□ -0.43
CDK5RAP3-236ENST00000584991 ANAPC16Q96DE5 110 aa12.34□□□□□ -0.43
CDK5RAP3-236ENST00000584991 NCOR1P1Q9H4R4 102 aa12.34□□□□□ -0.43
CDK5RAP3-236ENST00000584991 LRBAP50851 2863 aa12.33□□□□□ -0.44
CDK5RAP3-236ENST00000584991 PPIAL4EA0A075B759 164 aa12.33□□□□□ -0.44
CDK5RAP3-236ENST00000584991 PPIAL4DF5H284 164 aa12.33□□□□□ -0.44
CDK5RAP3-236ENST00000584991 LYNX1G3V0Z9 82 aa12.33□□□□□ -0.44
CDK5RAP3-236ENST00000584991 PPP1R2P9O14990 202 aa12.33□□□□□ -0.44
CDK5RAP3-236ENST00000584991 RBFOX2O43251 390 aaKnown RBP eCLIP12.33□□□□□ -0.442e-11■□□□□ 9.3
CDK5RAP3-236ENST00000584991 PPIAL4FP0DN26 164 aa12.33□□□□□ -0.44
CDK5RAP3-236ENST00000584991 LYNX1P0DP58 116 aa12.33□□□□□ -0.44
CDK5RAP3-236ENST00000584991 COL8A2P25067 703 aa12.33□□□□□ -0.44
CDK5RAP3-236ENST00000584991 FGF8P55075 233 aaPredicted RBP12.33□□□□□ -0.44
CDK5RAP3-236ENST00000584991 PDLIM3Q53GG5 364 aaPredicted RBP12.33□□□□□ -0.44
CDK5RAP3-236ENST00000584991 SSX7Q7RTT5 188 aa12.33□□□□□ -0.44
CDK5RAP3-236ENST00000584991 ZNRF1Q8ND25 227 aa12.33□□□□□ -0.44
CDK5RAP3-236ENST00000584991 OR52L2PQ8NGH6 319 aa12.33□□□□□ -0.44
CDK5RAP3-236ENST00000584991 OR10G9Q8NGN4 311 aa12.33□□□□□ -0.44
CDK5RAP3-236ENST00000584991 OR10G7Q8NGN6 311 aa12.33□□□□□ -0.44
CDK5RAP3-236ENST00000584991 OR52E5Q8NH55 327 aa12.33□□□□□ -0.44
CDK5RAP3-236ENST00000584991 PPP1R35Q8TAP8 253 aa12.33□□□□□ -0.44
CDK5RAP3-236ENST00000584991 RAB1CQ92928 201 aa12.33□□□□□ -0.44
CDK5RAP3-236ENST00000584991 SMIM7Q9BQ49 75 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms