RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 PARP12Q9H0J9 701 aaKnown RBP4.01□□□□□ -1.77
VAPA-207ENST00000583879 SRD5A3Q9H8P0 318 aa4.01□□□□□ -1.77
VAPA-207ENST00000583879 FGF20Q9NP95 211 aaPredicted RBP4.01□□□□□ -1.77
VAPA-207ENST00000583879 BABAM2Q9NXR7 383 aa4.01□□□□□ -1.77
VAPA-207ENST00000583879 SLC2A8Q9NY64 477 aa4.01□□□□□ -1.77
VAPA-207ENST00000583879 MGAT4CQ9UBM8 478 aa4.01□□□□□ -1.77
VAPA-207ENST00000583879 CKLFQ9UBR5 152 aa4.01□□□□□ -1.77
VAPA-207ENST00000583879 RPL36Q9Y3U8 105 aaKnown RBP4.01□□□□□ -1.77
VAPA-207ENST00000583879 ORC6Q9Y5N6 252 aa4.01□□□□□ -1.77
VAPA-207ENST00000583879 PUS1Q9Y606 427 aaKnown RBP eCLIP4.01□□□□□ -1.77
VAPA-207ENST00000583879 A0A1W2PPK0 400 aa4□□□□□ -1.77
VAPA-207ENST00000583879 CXorf65A6NEN9 183 aa4□□□□□ -1.77
VAPA-207ENST00000583879 NUPR2A6NF83 97 aa4□□□□□ -1.77
VAPA-207ENST00000583879 GAGE10A6NGK3 116 aa4□□□□□ -1.77
VAPA-207ENST00000583879 EI24O14681 340 aa4□□□□□ -1.77
VAPA-207ENST00000583879 SNAPINO95295 136 aa4□□□□□ -1.77
VAPA-207ENST00000583879 CRYGBP07316 175 aa4□□□□□ -1.77
VAPA-207ENST00000583879 RAB4AP20338 218 aa4□□□□□ -1.77
VAPA-207ENST00000583879 ZBTB25P24278 435 aa4□□□□□ -1.77
VAPA-207ENST00000583879 CEACAM6P40199 344 aa4□□□□□ -1.77
VAPA-207ENST00000583879 KIR2DS2P43631 304 aa4□□□□□ -1.77
VAPA-207ENST00000583879 LGALS7P47929 136 aa4□□□□□ -1.77
VAPA-207ENST00000583879 MFAP4P55083 255 aa4□□□□□ -1.77
VAPA-207ENST00000583879 RPS11P62280 158 aaKnown RBP eCLIP4□□□□□ -1.77
VAPA-207ENST00000583879 SSBP2P81877 361 aaPredicted RBP4□□□□□ -1.77
VAPA-207ENST00000583879 Q499Y3 187 aa4□□□□□ -1.77
VAPA-207ENST00000583879 YIF1BQ5BJH7 314 aa4□□□□□ -1.77
VAPA-207ENST00000583879 OR2G6Q5TZ20 316 aa4□□□□□ -1.77
VAPA-207ENST00000583879 AWAT2Q6E213 333 aa4□□□□□ -1.77
VAPA-207ENST00000583879 ZNF880Q6PDB4 577 aa4□□□□□ -1.77
VAPA-207ENST00000583879 CEMP1Q6PRD7 247 aaPredicted RBP4□□□□□ -1.77
VAPA-207ENST00000583879 TMPRSS11AQ6ZMR5 421 aa4□□□□□ -1.77
VAPA-207ENST00000583879 PDPNQ86YL7 162 aa4□□□□□ -1.77
VAPA-207ENST00000583879 RPP25LQ8N5L8 163 aaKnown RBP4□□□□□ -1.77
VAPA-207ENST00000583879 ZNF383Q8NA42 475 aa4□□□□□ -1.77
VAPA-207ENST00000583879 OR13C5Q8NGS8 318 aa4□□□□□ -1.77
VAPA-207ENST00000583879 FAM46BQ96A09 425 aa4□□□□□ -1.77
VAPA-207ENST00000583879 SMIM19Q96E16 107 aa4□□□□□ -1.77
VAPA-207ENST00000583879 NEDD4LQ96PU5 975 aa4□□□□□ -1.77
VAPA-207ENST00000583879 SULT4A1Q9BR01 284 aa4□□□□□ -1.77
VAPA-207ENST00000583879 C1orf43Q9BWL3 253 aa4□□□□□ -1.77
VAPA-207ENST00000583879 C11orf54Q9H0W9 315 aaPredicted RBP4□□□□□ -1.77
VAPA-207ENST00000583879 AUNIPQ9H7T9 357 aa4□□□□□ -1.77
VAPA-207ENST00000583879 GHRLQ9UBU3 117 aa4□□□□□ -1.77
VAPA-207ENST00000583879 RNF24Q9Y225 148 aa4□□□□□ -1.77
VAPA-207ENST00000583879 TRBV5-7A0A0A0MS05 114 aa3.99□□□□□ -1.77
VAPA-207ENST00000583879 LOC100130705A0A1B0GUX0 176 aa3.99□□□□□ -1.77
VAPA-207ENST00000583879 MSGN1A6NI15 193 aa3.99□□□□□ -1.77
VAPA-207ENST00000583879 H3BNX3 289 aa3.99□□□□□ -1.77
VAPA-207ENST00000583879 RBMXL2O75526 392 aaKnown RBP3.99□□□□□ -1.77
VAPA-207ENST00000583879 NAPSAO96009 420 aa3.99□□□□□ -1.77
VAPA-207ENST00000583879 LALBAP00709 142 aa3.99□□□□□ -1.77
VAPA-207ENST00000583879 IGLV2-23P01705 113 aa3.99□□□□□ -1.77
VAPA-207ENST00000583879 FOLR2P14207 255 aa3.99□□□□□ -1.77
VAPA-207ENST00000583879 RPA2P15927 270 aa3.99□□□□□ -1.77
VAPA-207ENST00000583879 SRMP19623 302 aa3.99□□□□□ -1.77
VAPA-207ENST00000583879 DCKP27707 260 aa3.99□□□□□ -1.77
VAPA-207ENST00000583879 HTR2CP28335 458 aa3.99□□□□□ -1.77
VAPA-207ENST00000583879 RAB4BP61018 213 aa3.99□□□□□ -1.77
VAPA-207ENST00000583879 DEFA5Q01523 94 aa3.99□□□□□ -1.77
VAPA-207ENST00000583879 PJVKQ0ZLH3 352 aa3.99□□□□□ -1.77
VAPA-207ENST00000583879 GUCA2BQ16661 112 aa3.99□□□□□ -1.77
VAPA-207ENST00000583879 C1orf146Q5VVC0 180 aa3.99□□□□□ -1.77
VAPA-207ENST00000583879 C6orf201Q7Z4U5 140 aa3.99□□□□□ -1.77
VAPA-207ENST00000583879 UXS1Q8NBZ7 420 aa3.99□□□□□ -1.77
VAPA-207ENST00000583879 LRRC20Q8TCA0 184 aa3.99□□□□□ -1.77
VAPA-207ENST00000583879 DYNLRB2Q8TF09 96 aa3.99□□□□□ -1.77
VAPA-207ENST00000583879 PTX4Q96A99 478 aa3.99□□□□□ -1.77
VAPA-207ENST00000583879 WFDC10AQ9H1F0 79 aa3.99□□□□□ -1.77
VAPA-207ENST00000583879 HEYLQ9NQ87 328 aaPredicted RBP3.99□□□□□ -1.77
VAPA-207ENST00000583879 ZC4H2Q9NQZ6 224 aa3.99□□□□□ -1.77
VAPA-207ENST00000583879 TECRQ9NZ01 308 aaKnown RBP3.99□□□□□ -1.77
VAPA-207ENST00000583879 ZNF221Q9UK13 617 aa3.99□□□□□ -1.77
VAPA-207ENST00000583879 KLK5Q9Y337 293 aaPredicted RBP3.99□□□□□ -1.77
VAPA-207ENST00000583879 LOC102724200A0A096LPH7 203 aaPredicted RBP3.98□□□□□ -1.77
VAPA-207ENST00000583879 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.98□□□□□ -1.77
VAPA-207ENST00000583879 TRBV6-6A0A0A6YYG2 114 aa3.98□□□□□ -1.77
VAPA-207ENST00000583879 TRBV9A0A0B4J1U6 114 aa3.98□□□□□ -1.77
VAPA-207ENST00000583879 A0A0B4J293 547 aa3.98□□□□□ -1.77
VAPA-207ENST00000583879 A0A0J9YWU9 116 aa3.98□□□□□ -1.77
VAPA-207ENST00000583879 C2orf70A6NJV1 201 aa3.98□□□□□ -1.77
VAPA-207ENST00000583879 SRRM4A7MD48 611 aaKnown RBP3.98□□□□□ -1.77
VAPA-207ENST00000583879 ZNF561-AS1K7EIQ3 104 aa3.98□□□□□ -1.77
VAPA-207ENST00000583879 LGALS9O00182 355 aa3.98□□□□□ -1.77
VAPA-207ENST00000583879 BMPR1BO00238 502 aa3.98□□□□□ -1.77
VAPA-207ENST00000583879 DFFBO76075 338 aa3.98□□□□□ -1.77
VAPA-207ENST00000583879 APOA2P02652 100 aa3.98□□□□□ -1.77
VAPA-207ENST00000583879 SCTP09683 121 aa3.98□□□□□ -1.77
VAPA-207ENST00000583879 OR9G9P0C7N8 305 aa3.98□□□□□ -1.77
VAPA-207ENST00000583879 UBBP0CG47 229 aa3.98□□□□□ -1.77
VAPA-207ENST00000583879 APELAP0DMC3 54 aa3.98□□□□□ -1.77
VAPA-207ENST00000583879 CBLN1P23435 193 aa3.98□□□□□ -1.77
VAPA-207ENST00000583879 RASSF2P50749 326 aa3.98□□□□□ -1.77
VAPA-207ENST00000583879 RHOGP84095 191 aa3.98□□□□□ -1.77
VAPA-207ENST00000583879 EWSR1Q01844 656 aaKnown RBP eCLIP3.98□□□□□ -1.77
VAPA-207ENST00000583879 ATP5G2Q06055 141 aa3.98□□□□□ -1.77
VAPA-207ENST00000583879 TNFRSF9Q07011 255 aa3.98□□□□□ -1.77
VAPA-207ENST00000583879 SMN1Q16637 294 aaKnown RBP3.98□□□□□ -1.77
VAPA-207ENST00000583879 MRGPRG-AS1Q2M3A8 158 aa3.98□□□□□ -1.77
VAPA-207ENST00000583879 TMEM41BQ5BJD5 291 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms