RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 KCNE1P15382 129 aa1.46□□□□□ -2.18
SMCHD1-209ENST00000583441 CCL1P22362 96 aa1.46□□□□□ -2.18
SMCHD1-209ENST00000583441 PEBP1P30086 187 aaKnown RBP1.46□□□□□ -2.18
SMCHD1-209ENST00000583441 CCR2P41597 374 aa1.46□□□□□ -2.18
SMCHD1-209ENST00000583441 HAAOP46952 286 aa1.46□□□□□ -2.18
SMCHD1-209ENST00000583441 IDH3GP51553 393 aaPredicted RBP1.46□□□□□ -2.18
SMCHD1-209ENST00000583441 TMEM258P61165 79 aa1.46□□□□□ -2.18
SMCHD1-209ENST00000583441 HIST1H4AP62805 103 aaKnown RBP1.46□□□□□ -2.18
SMCHD1-209ENST00000583441 RPL30P62888 115 aaKnown RBP1.46□□□□□ -2.18
SMCHD1-209ENST00000583441 TNFAIP8L3Q5GJ75 292 aa1.46□□□□□ -2.18
SMCHD1-209ENST00000583441 SAPCD1Q5SSQ6 148 aa1.46□□□□□ -2.18
SMCHD1-209ENST00000583441 DEFB125Q8N687 156 aa1.46□□□□□ -2.18
SMCHD1-209ENST00000583441 CXorf21Q9HAI6 301 aa1.46□□□□□ -2.18
SMCHD1-209ENST00000583441 MYO16Q9Y6X6 1858 aa1.46□□□□□ -2.18
SMCHD1-209ENST00000583441 EVC2Q86UK5 1308 aa1.45□□□□□ -2.18
SMCHD1-209ENST00000583441 PXDNLA1KZ92 1463 aa1.45□□□□□ -2.18
SMCHD1-209ENST00000583441 TMSB15BA0A087X1C1 80 aa1.45□□□□□ -2.18
SMCHD1-209ENST00000583441 EVPLLA8MZ36 301 aa1.45□□□□□ -2.18
SMCHD1-209ENST00000583441 IFNA5P01569 189 aa1.45□□□□□ -2.18
SMCHD1-209ENST00000583441 OR5G3P0C626 314 aa1.45□□□□□ -2.18
SMCHD1-209ENST00000583441 NKX2-5P52952 324 aaPredicted RBP1.45□□□□□ -2.18
SMCHD1-209ENST00000583441 TCL1AP56279 114 aa1.45□□□□□ -2.18
SMCHD1-209ENST00000583441 TPI1P60174 286 aa1.45□□□□□ -2.18
SMCHD1-209ENST00000583441 KRTAP21-3Q3LHN1 58 aa1.45□□□□□ -2.18
SMCHD1-209ENST00000583441 GLT8D1Q68CQ7 371 aa1.45□□□□□ -2.18
SMCHD1-209ENST00000583441 ZNF705AQ6ZN79 300 aaPredicted RBP1.45□□□□□ -2.18
SMCHD1-209ENST00000583441 C10orf126Q8N4M7 172 aa1.45□□□□□ -2.18
SMCHD1-209ENST00000583441 OR8B12Q8NGG6 310 aa1.45□□□□□ -2.18
SMCHD1-209ENST00000583441 OR1L8Q8NGR8 309 aa1.45□□□□□ -2.18
SMCHD1-209ENST00000583441 TIMM21Q9BVV7 248 aa1.45□□□□□ -2.18
SMCHD1-209ENST00000583441 TTTY13Q9BZ97 58 aa1.45□□□□□ -2.18
SMCHD1-209ENST00000583441 C8orf4Q9NR00 106 aa1.45□□□□□ -2.18
SMCHD1-209ENST00000583441 GUCA1BQ9UMX6 200 aa1.45□□□□□ -2.18
SMCHD1-209ENST00000583441 COQ4Q9Y3A0 265 aa1.45□□□□□ -2.18
SMCHD1-209ENST00000583441 CACNA1GO43497 2377 aa1.45□□□□□ -2.18
SMCHD1-209ENST00000583441 DCCP43146 1447 aa1.45□□□□□ -2.18
SMCHD1-209ENST00000583441 VWDEQ8N2E2 1590 aa1.45□□□□□ -2.18
SMCHD1-209ENST00000583441 COL4A2P08572 1712 aa1.45□□□□□ -2.18
SMCHD1-209ENST00000583441 TMEM269A0A1B0GVZ9 245 aa1.44□□□□□ -2.18
SMCHD1-209ENST00000583441 ZNF860A6NHJ4 632 aa1.44□□□□□ -2.18
SMCHD1-209ENST00000583441 RFPL4AA6NLU0 287 aa1.44□□□□□ -2.18
SMCHD1-209ENST00000583441 SIGLEC16A6NMB1 481 aa1.44□□□□□ -2.18
SMCHD1-209ENST00000583441 RFPL4AL1F8VTS6 287 aa1.44□□□□□ -2.18
SMCHD1-209ENST00000583441 LST1O00453 97 aa1.44□□□□□ -2.18
SMCHD1-209ENST00000583441 PLA2G10O15496 165 aa1.44□□□□□ -2.18
SMCHD1-209ENST00000583441 SRP19P09132 144 aaKnown RBP1.44□□□□□ -2.18
SMCHD1-209ENST00000583441 MAP2K4P45985 399 aa1.44□□□□□ -2.18
SMCHD1-209ENST00000583441 CSN1S1P47710 185 aa1.44□□□□□ -2.18
SMCHD1-209ENST00000583441 REG1BP48304 166 aa1.44□□□□□ -2.18
SMCHD1-209ENST00000583441 RAB13P51153 203 aa1.44□□□□□ -2.18
SMCHD1-209ENST00000583441 IMPG1Q17R60 797 aa1.44□□□□□ -2.18
SMCHD1-209ENST00000583441 TPRXLQ17RH7 258 aa1.44□□□□□ -2.18
SMCHD1-209ENST00000583441 ZNF791Q3KP31 576 aaPredicted RBP1.44□□□□□ -2.18
SMCHD1-209ENST00000583441 FAM201AQ5SY85 155 aa1.44□□□□□ -2.18
SMCHD1-209ENST00000583441 TMEM42Q69YG0 159 aa1.44□□□□□ -2.18
SMCHD1-209ENST00000583441 SFXN4Q6P4A7 337 aa1.44□□□□□ -2.18
SMCHD1-209ENST00000583441 SSX8Q7RTT4 187 aa1.44□□□□□ -2.18
SMCHD1-209ENST00000583441 IMP4Q96G21 291 aaKnown RBP1.44□□□□□ -2.18
SMCHD1-209ENST00000583441 CNBD2Q96M20 576 aa1.44□□□□□ -2.18
SMCHD1-209ENST00000583441 IMMP2LQ96T52 175 aa1.44□□□□□ -2.18
SMCHD1-209ENST00000583441 VCX3BQ9H321 246 aa1.44□□□□□ -2.18
SMCHD1-209ENST00000583441 OR51I1Q9H343 314 aa1.44□□□□□ -2.18
SMCHD1-209ENST00000583441 ADAMTS7Q9UKP4 1686 aa1.44□□□□□ -2.18
SMCHD1-209ENST00000583441 ADCY9O60503 1353 aa1.44□□□□□ -2.18
SMCHD1-209ENST00000583441 DICER1Q9UPY3 1922 aaKnown RBP1.44□□□□□ -2.18
SMCHD1-209ENST00000583441 MEIKINA0A087WXM9 373 aa1.43□□□□□ -2.18
SMCHD1-209ENST00000583441 A8MUN3 132 aa1.43□□□□□ -2.18
SMCHD1-209ENST00000583441 ZNF705FA8MVS1 300 aaPredicted RBP1.43□□□□□ -2.18
SMCHD1-209ENST00000583441 F8W036 122 aa1.43□□□□□ -2.18
SMCHD1-209ENST00000583441 H7C2G1 150 aa1.43□□□□□ -2.18
SMCHD1-209ENST00000583441 NOS1APO75052 506 aaPredicted RBP1.43□□□□□ -2.18
SMCHD1-209ENST00000583441 C1QAP02745 245 aa1.43□□□□□ -2.18
SMCHD1-209ENST00000583441 ZNF705DP0CH99 300 aaPredicted RBP1.43□□□□□ -2.18
SMCHD1-209ENST00000583441 HIST1H1EP10412 219 aaKnown RBP1.43□□□□□ -2.18
SMCHD1-209ENST00000583441 OR4D2P58180 307 aa1.43□□□□□ -2.18
SMCHD1-209ENST00000583441 RGS21Q2M5E4 152 aa1.43□□□□□ -2.18
SMCHD1-209ENST00000583441 C9orf64Q5T6V5 341 aa1.43□□□□□ -2.18
SMCHD1-209ENST00000583441 HIST2H3PS2Q5TEC6 136 aa1.43□□□□□ -2.18
SMCHD1-209ENST00000583441 DYNAPQ8N1N2 210 aa1.43□□□□□ -2.18
SMCHD1-209ENST00000583441 RPP25LQ8N5L8 163 aaKnown RBP1.43□□□□□ -2.18
SMCHD1-209ENST00000583441 OR51T1Q8NGJ9 327 aa1.43□□□□□ -2.18
SMCHD1-209ENST00000583441 OR52E6Q96RD3 313 aa1.43□□□□□ -2.18
SMCHD1-209ENST00000583441 XPNPEP1Q9NQW7 623 aa1.43□□□□□ -2.18
SMCHD1-209ENST00000583441 DOK5Q9P104 306 aa1.43□□□□□ -2.18
SMCHD1-209ENST00000583441 KDM5BQ9UGL1 1544 aa1.43□□□□□ -2.18
SMCHD1-209ENST00000583441 CACNA1SQ13698 1873 aa1.43□□□□□ -2.18
SMCHD1-209ENST00000583441 TRAV7A0A075B6U4 112 aa1.42□□□□□ -2.18
SMCHD1-209ENST00000583441 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.42□□□□□ -2.18
SMCHD1-209ENST00000583441 TRAV38-1A0A0B4J264 116 aa1.42□□□□□ -2.18
SMCHD1-209ENST00000583441 IGHV1-18A0A0C4DH31 117 aa1.42□□□□□ -2.18
SMCHD1-209ENST00000583441 GOLGA6L19H0YKK7 550 aa1.42□□□□□ -2.18
SMCHD1-209ENST00000583441 I3L521 148 aa1.42□□□□□ -2.18
SMCHD1-209ENST00000583441 SERPINA7P05543 415 aa1.42□□□□□ -2.18
SMCHD1-209ENST00000583441 MSMBP08118 114 aa1.42□□□□□ -2.18
SMCHD1-209ENST00000583441 LGALS1P09382 135 aaKnown RBP1.42□□□□□ -2.18
SMCHD1-209ENST00000583441 FGF6P10767 208 aa1.42□□□□□ -2.18
SMCHD1-209ENST00000583441 MSNP26038 577 aaKnown RBP1.42□□□□□ -2.18
SMCHD1-209ENST00000583441 S100A7P31151 101 aa1.42□□□□□ -2.18
SMCHD1-209ENST00000583441 SULT1A1P50225 295 aa1.42□□□□□ -2.18
SMCHD1-209ENST00000583441 CEBPGP53567 150 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms