RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 CLCC1Q96S66 551 aa8.18□□□□□ -1.1
TOP3A-212ENST00000582122 TSC22D3Q99576 134 aa8.18□□□□□ -1.1
TOP3A-212ENST00000582122 SRSF8Q9BRL6 282 aaKnown RBP8.18□□□□□ -1.1
TOP3A-212ENST00000582122 SLC2A9Q9NRM0 540 aa8.18□□□□□ -1.1
TOP3A-212ENST00000582122 COPZ2Q9P299 210 aa8.18□□□□□ -1.1
TOP3A-212ENST00000582122 LINC00527Q9UJ94 153 aa8.18□□□□□ -1.1
TOP3A-212ENST00000582122 NUDT19A8MXV4 375 aa8.17□□□□□ -1.1
TOP3A-212ENST00000582122 ARPC1BO15143 372 aaKnown RBP8.17□□□□□ -1.1
TOP3A-212ENST00000582122 MPPED1O15442 326 aa8.17□□□□□ -1.1
TOP3A-212ENST00000582122 SNAPC5O75971 98 aa8.17□□□□□ -1.1
TOP3A-212ENST00000582122 DHFRP00374 187 aa8.17□□□□□ -1.1
TOP3A-212ENST00000582122 IGLV1-40P01703 118 aa8.17□□□□□ -1.1
TOP3A-212ENST00000582122 PF4P02776 101 aa8.17□□□□□ -1.1
TOP3A-212ENST00000582122 SERPINE2P07093 398 aa8.17□□□□□ -1.1
TOP3A-212ENST00000582122 CTSDP07339 412 aaPredicted RBP8.17□□□□□ -1.1
TOP3A-212ENST00000582122 INPP1P49441 399 aa8.17□□□□□ -1.1
TOP3A-212ENST00000582122 GNB1P62873 340 aa8.17□□□□□ -1.1
TOP3A-212ENST00000582122 RPL8P62917 257 aaKnown RBP8.17□□□□□ -1.1
TOP3A-212ENST00000582122 TNXAQ16473 311 aa8.17□□□□□ -1.1
TOP3A-212ENST00000582122 ECSCRQ19T08 205 aa8.17□□□□□ -1.1
TOP3A-212ENST00000582122 PHLDA2Q53GA4 152 aa8.17□□□□□ -1.1
TOP3A-212ENST00000582122 TCTEX1D4Q5JR98 221 aa8.17□□□□□ -1.1
TOP3A-212ENST00000582122 FAM209BQ5JX69 171 aa8.17□□□□□ -1.1
TOP3A-212ENST00000582122 HSD17B13Q7Z5P4 300 aaPredicted RBP8.17□□□□□ -1.1
TOP3A-212ENST00000582122 TBC1D26Q86UD7 250 aa8.17□□□□□ -1.1
TOP3A-212ENST00000582122 MRPL41Q8IXM3 137 aaKnown RBP8.17□□□□□ -1.1
TOP3A-212ENST00000582122 OR4C16Q8NGL9 310 aa8.17□□□□□ -1.1
TOP3A-212ENST00000582122 GRPEL2Q8TAA5 225 aa8.17□□□□□ -1.1
TOP3A-212ENST00000582122 UBE2E2Q96LR5 201 aa8.17□□□□□ -1.1
TOP3A-212ENST00000582122 PHB2Q99623 299 aa8.17□□□□□ -1.1
TOP3A-212ENST00000582122 GPR61Q9BZJ8 451 aa8.17□□□□□ -1.1
TOP3A-212ENST00000582122 ZNF430Q9H8G1 570 aaPredicted RBP8.17□□□□□ -1.1
TOP3A-212ENST00000582122 HRASLSQ9HDD0 168 aa8.17□□□□□ -1.1
TOP3A-212ENST00000582122 FKBP11Q9NYL4 201 aa8.17□□□□□ -1.1
TOP3A-212ENST00000582122 WSB1Q9Y6I7 421 aa8.17□□□□□ -1.1
TOP3A-212ENST00000582122 V9GYH0 126 aa8.17□□□□□ -1.1
TOP3A-212ENST00000582122 TGP01266 2768 aa8.17□□□□□ -1.1
TOP3A-212ENST00000582122 A0A0G2JLM5 398 aa8.16□□□□□ -1.1
TOP3A-212ENST00000582122 A0A1W2PN81 502 aa8.16□□□□□ -1.1
TOP3A-212ENST00000582122 MARCH11A6NNE9 402 aa8.16□□□□□ -1.1
TOP3A-212ENST00000582122 G3V318 75 aa8.16□□□□□ -1.1
TOP3A-212ENST00000582122 H0Y980 276 aa8.16□□□□□ -1.1
TOP3A-212ENST00000582122 PLXNB1O43157 2135 aa8.16□□□□□ -1.1
TOP3A-212ENST00000582122 CYB5BO43169 146 aa8.16□□□□□ -1.1
TOP3A-212ENST00000582122 RAMP3O60896 148 aa8.16□□□□□ -1.1
TOP3A-212ENST00000582122 DUS4LO95620 317 aaKnown RBP8.16□□□□□ -1.1
TOP3A-212ENST00000582122 EGR2P11161 476 aaPredicted RBP8.16□□□□□ -1.1
TOP3A-212ENST00000582122 TNCP24821 2201 aa8.16□□□□□ -1.1
TOP3A-212ENST00000582122 CHRNA7P36544 502 aa8.16□□□□□ -1.1
TOP3A-212ENST00000582122 MYCNOSP40205 109 aa8.16□□□□□ -1.1
TOP3A-212ENST00000582122 RAB9AP51151 201 aa8.16□□□□□ -1.1
TOP3A-212ENST00000582122 PIGPP57054 158 aa8.16□□□□□ -1.1
TOP3A-212ENST00000582122 BRWD1-AS2P59051 145 aa8.16□□□□□ -1.1
TOP3A-212ENST00000582122 PRKDCP78527 4128 aaKnown RBP8.16□□□□□ -1.1
TOP3A-212ENST00000582122 NDPQ00604 133 aa8.16□□□□□ -1.1
TOP3A-212ENST00000582122 C19orf54Q5BKX5 351 aa8.16□□□□□ -1.1
TOP3A-212ENST00000582122 LFNGQ8NES3 379 aa8.16□□□□□ -1.1
TOP3A-212ENST00000582122 OR4D10Q8NGI6 311 aa8.16□□□□□ -1.1
TOP3A-212ENST00000582122 MYOZ3Q8TDC0 251 aa8.16□□□□□ -1.1
TOP3A-212ENST00000582122 C4orf3Q8WVX3 66 aa8.16□□□□□ -1.1
TOP3A-212ENST00000582122 SRSF12Q8WXF0 261 aaKnown RBP8.16□□□□□ -1.1
TOP3A-212ENST00000582122 SLC25A21Q9BQT8 299 aaPredicted RBP8.16□□□□□ -1.1
TOP3A-212ENST00000582122 COMMD5Q9GZQ3 224 aa8.16□□□□□ -1.1
TOP3A-212ENST00000582122 MCUBQ9NWR8 336 aa8.16□□□□□ -1.1
TOP3A-212ENST00000582122 CACFD1Q9UGQ2 172 aa8.16□□□□□ -1.1
TOP3A-212ENST00000582122 VSIG4Q9Y279 399 aa8.16□□□□□ -1.1
TOP3A-212ENST00000582122 KCNIP3Q9Y2W7 256 aa8.16□□□□□ -1.1
TOP3A-212ENST00000582122 A0A1W2PRX2 142 aa8.15□□□□□ -1.1
TOP3A-212ENST00000582122 NAP1L6A6NFF2 107 aa8.15□□□□□ -1.1
TOP3A-212ENST00000582122 A6NHS1 94 aa8.15□□□□□ -1.1
TOP3A-212ENST00000582122 MSGN1A6NI15 193 aa8.15□□□□□ -1.1
TOP3A-212ENST00000582122 CENPXA8MT69 81 aa8.15□□□□□ -1.1
TOP3A-212ENST00000582122 ADARB2-AS1A8MUL3 147 aa8.15□□□□□ -1.1
TOP3A-212ENST00000582122 S1PR2O95136 353 aa8.15□□□□□ -1.1
TOP3A-212ENST00000582122 TSPAN15O95858 294 aa8.15□□□□□ -1.1
TOP3A-212ENST00000582122 OR9G9P0C7N8 305 aa8.15□□□□□ -1.1
TOP3A-212ENST00000582122 ZNF735P0CB33 412 aa8.15□□□□□ -1.1
TOP3A-212ENST00000582122 HLA-GP17693 338 aa8.15□□□□□ -1.1
TOP3A-212ENST00000582122 LPAR6P43657 344 aa8.15□□□□□ -1.1
TOP3A-212ENST00000582122 RPL27AP46776 148 aaKnown RBP8.15□□□□□ -1.1
TOP3A-212ENST00000582122 PPP5CP53041 499 aa8.15□□□□□ -1.1
TOP3A-212ENST00000582122 RUNX1Q01196 453 aa8.15□□□□□ -1.1
TOP3A-212ENST00000582122 ZNF79Q15937 498 aa8.15□□□□□ -1.1
TOP3A-212ENST00000582122 CNPY1Q3B7I2 92 aa8.15□□□□□ -1.1
TOP3A-212ENST00000582122 TRIQKQ629K1 86 aa8.15□□□□□ -1.1
TOP3A-212ENST00000582122 OR4A47Q6IF82 309 aa8.15□□□□□ -1.1
TOP3A-212ENST00000582122 C10orf99Q6UWK7 81 aa8.15□□□□□ -1.1
TOP3A-212ENST00000582122 IDO2Q6ZQW0 420 aa8.15□□□□□ -1.1
TOP3A-212ENST00000582122 KLHL30-AS1Q8NEE0 82 aa8.15□□□□□ -1.1
TOP3A-212ENST00000582122 OR51S1Q8NGJ8 323 aa8.15□□□□□ -1.1
TOP3A-212ENST00000582122 OR13C8Q8NGS7 320 aa8.15□□□□□ -1.1
TOP3A-212ENST00000582122 FAM110DQ8TAY7 271 aaPredicted RBP8.15□□□□□ -1.1
TOP3A-212ENST00000582122 MARCH1Q8TCQ1 289 aa8.15□□□□□ -1.1
TOP3A-212ENST00000582122 S100ZQ8WXG8 99 aa8.15□□□□□ -1.1
TOP3A-212ENST00000582122 TRIM63Q969Q1 353 aa8.15□□□□□ -1.1
TOP3A-212ENST00000582122 USMG5Q96IX5 58 aa8.15□□□□□ -1.1
TOP3A-212ENST00000582122 C7orf50Q9BRJ6 194 aaKnown RBP8.15□□□□□ -1.1
TOP3A-212ENST00000582122 TPSG1Q9NRR2 321 aa8.15□□□□□ -1.1
TOP3A-212ENST00000582122 TMEM140Q9NV12 185 aa8.15□□□□□ -1.1
TOP3A-212ENST00000582122 PRNDQ9UKY0 176 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms