RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 OR4A16Q8NH70 328 aa11.38□□□□□ -0.59
SKA2-205ENST00000580541 CHPT1Q8WUD6 406 aa11.38□□□□□ -0.59
SKA2-205ENST00000580541 MITD1Q8WV92 249 aa11.38□□□□□ -0.59
SKA2-205ENST00000580541 LSM10Q969L4 123 aaKnown RBP11.38□□□□□ -0.59
SKA2-205ENST00000580541 SEC22AQ96IW7 307 aa11.38□□□□□ -0.59
SKA2-205ENST00000580541 FBXL15Q9H469 300 aa11.38□□□□□ -0.59
SKA2-205ENST00000580541 TMED3Q9Y3Q3 217 aa11.38□□□□□ -0.59
SKA2-205ENST00000580541 MMP24Q9Y5R2 645 aa11.38□□□□□ -0.59
SKA2-205ENST00000580541 ANK3Q12955 4377 aaKnown RBP11.38□□□□□ -0.59
SKA2-205ENST00000580541 RBMXL2O75526 392 aaKnown RBP11.37□□□□□ -0.59
SKA2-205ENST00000580541 KBTBD11O94819 623 aa11.37□□□□□ -0.59
SKA2-205ENST00000580541 CNIH1O95406 144 aa11.37□□□□□ -0.59
SKA2-205ENST00000580541 HLA-DRB1P01911 266 aa11.37□□□□□ -0.59
SKA2-205ENST00000580541 SAA1P0DJI8 122 aaPredicted RBP11.37□□□□□ -0.59
SKA2-205ENST00000580541 OR4A47Q6IF82 309 aa11.37□□□□□ -0.59
SKA2-205ENST00000580541 ZNF562Q6V9R5 426 aa11.37□□□□□ -0.59
SKA2-205ENST00000580541 PUSL1Q8N0Z8 303 aaKnown RBP11.37□□□□□ -0.59
SKA2-205ENST00000580541 C12orf45Q8N5I9 185 aaPredicted RBP11.37□□□□□ -0.59
SKA2-205ENST00000580541 TMEM167AQ8TBQ9 72 aa11.37□□□□□ -0.59
SKA2-205ENST00000580541 TMEM140Q9NV12 185 aa11.37□□□□□ -0.59
SKA2-205ENST00000580541 PRNDQ9UKY0 176 aa11.37□□□□□ -0.59
SKA2-205ENST00000580541 CRYGBP07316 175 aa11.36□□□□□ -0.59
SKA2-205ENST00000580541 CNTFRP26992 372 aa11.36□□□□□ -0.59
SKA2-205ENST00000580541 RPL8P62917 257 aaKnown RBP11.36□□□□□ -0.59
SKA2-205ENST00000580541 PRSS8Q16651 343 aa11.36□□□□□ -0.59
SKA2-205ENST00000580541 C9orf152Q5JTZ5 239 aa11.36□□□□□ -0.59
SKA2-205ENST00000580541 VKORC1L1Q8N0U8 176 aa11.36□□□□□ -0.59
SKA2-205ENST00000580541 UXS1Q8NBZ7 420 aa11.36□□□□□ -0.59
SKA2-205ENST00000580541 SPIN2AQ99865 258 aa11.36□□□□□ -0.59
SKA2-205ENST00000580541 SPIN2BQ9BPZ2 258 aa11.36□□□□□ -0.59
SKA2-205ENST00000580541 GON7Q9BXV9 100 aa11.36□□□□□ -0.59
SKA2-205ENST00000580541 COMMD5Q9GZQ3 224 aa11.36□□□□□ -0.59
SKA2-205ENST00000580541 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.36□□□□□ -0.59
SKA2-205ENST00000580541 A0A1B0GU03 582 aa11.35□□□□□ -0.59
SKA2-205ENST00000580541 UPK2O00526 184 aa11.35□□□□□ -0.59
SKA2-205ENST00000580541 CHST1O43916 411 aa11.35□□□□□ -0.59
SKA2-205ENST00000580541 IGKV1-39P01597 117 aa11.35□□□□□ -0.59
SKA2-205ENST00000580541 IGKV1D-39P04432 117 aa11.35□□□□□ -0.59
SKA2-205ENST00000580541 SLC25A6P12236 298 aa11.35□□□□□ -0.59
SKA2-205ENST00000580541 SPNP16150 400 aa11.35□□□□□ -0.59
SKA2-205ENST00000580541 TMEM267Q0VDI3 215 aaPredicted RBP11.35□□□□□ -0.59
SKA2-205ENST00000580541 TATDN3Q17R31 274 aa11.35□□□□□ -0.59
SKA2-205ENST00000580541 ANKRD55Q3KP44 614 aa11.35□□□□□ -0.59
SKA2-205ENST00000580541 THOC7Q6I9Y2 204 aaKnown RBP11.35□□□□□ -0.59
SKA2-205ENST00000580541 FOXRED2Q8IWF2 684 aa11.35□□□□□ -0.59
SKA2-205ENST00000580541 MRPL41Q8IXM3 137 aaKnown RBP11.35□□□□□ -0.59
SKA2-205ENST00000580541 SLC35G3Q8N808 338 aa11.35□□□□□ -0.59
SKA2-205ENST00000580541 OR2T6Q8NHC8 308 aa11.35□□□□□ -0.59
SKA2-205ENST00000580541 CLCC1Q96S66 551 aa11.35□□□□□ -0.59
SKA2-205ENST00000580541 SEC22CQ9BRL7 303 aa11.35□□□□□ -0.59
SKA2-205ENST00000580541 PDCD10Q9BUL8 212 aa11.35□□□□□ -0.59
SKA2-205ENST00000580541 A0A1B0GUS0 222 aa11.34□□□□□ -0.59
SKA2-205ENST00000580541 SSNA1O43805 119 aa11.34□□□□□ -0.59
SKA2-205ENST00000580541 TSPAN9O75954 239 aa11.34□□□□□ -0.59
SKA2-205ENST00000580541 IGHG2P01859 326 aa11.34□□□□□ -0.59
SKA2-205ENST00000580541 IL6RP08887 468 aaPredicted RBP11.34□□□□□ -0.59
SKA2-205ENST00000580541 SULT1A3P0DMM9 295 aa11.34□□□□□ -0.59
SKA2-205ENST00000580541 SULT1A4P0DMN0 295 aa11.34□□□□□ -0.59
SKA2-205ENST00000580541 HLA-GP17693 338 aa11.34□□□□□ -0.59
SKA2-205ENST00000580541 BLCAPP62952 87 aa11.34□□□□□ -0.59
SKA2-205ENST00000580541 FXYD3Q14802 87 aa11.34□□□□□ -0.59
SKA2-205ENST00000580541 LYZL2Q7Z4W2 148 aa11.34□□□□□ -0.59
SKA2-205ENST00000580541 SLC35E3Q7Z769 313 aa11.34□□□□□ -0.59
SKA2-205ENST00000580541 LURAP1LQ8IV03 231 aa11.34□□□□□ -0.59
SKA2-205ENST00000580541 OR52B4Q8NGK2 314 aa11.34□□□□□ -0.59
SKA2-205ENST00000580541 OR4F5Q8NH21 305 aa11.34□□□□□ -0.59
SKA2-205ENST00000580541 OR5B3Q8NH48 314 aa11.34□□□□□ -0.59
SKA2-205ENST00000580541 TMEM68Q96MH6 324 aa11.34□□□□□ -0.59
SKA2-205ENST00000580541 ZNF430Q9H8G1 570 aaPredicted RBP11.34□□□□□ -0.59
SKA2-205ENST00000580541 COA4Q9NYJ1 87 aa11.34□□□□□ -0.59
SKA2-205ENST00000580541 TNCP24821 2201 aa11.33□□□□□ -0.59
SKA2-205ENST00000580541 NIPBLQ6KC79 2804 aaeCLIP11.33□□□□□ -0.6
SKA2-205ENST00000580541 AP4M1O00189 453 aa11.33□□□□□ -0.6
SKA2-205ENST00000580541 NDUFA7O95182 113 aa11.33□□□□□ -0.6
SKA2-205ENST00000580541 CA2P00918 260 aa11.33□□□□□ -0.6
SKA2-205ENST00000580541 IGKV1-5P01602 117 aa11.33□□□□□ -0.6
SKA2-205ENST00000580541 AMY1AP04745 511 aa11.33□□□□□ -0.6
SKA2-205ENST00000580541 HOXB5P09067 269 aa11.33□□□□□ -0.6
SKA2-205ENST00000580541 GNB1P62873 340 aa11.33□□□□□ -0.6
SKA2-205ENST00000580541 CX3CL1P78423 397 aa11.33□□□□□ -0.6
SKA2-205ENST00000580541 SMCO1Q147U7 214 aa11.33□□□□□ -0.6
SKA2-205ENST00000580541 TNXAQ16473 311 aa11.33□□□□□ -0.6
SKA2-205ENST00000580541 FBLN7Q53RD9 439 aa11.33□□□□□ -0.6
SKA2-205ENST00000580541 ZNF429Q86V71 674 aa11.33□□□□□ -0.6
SKA2-205ENST00000580541 Q8N2B8 174 aa11.33□□□□□ -0.6
SKA2-205ENST00000580541 OR1L8Q8NGR8 309 aa11.33□□□□□ -0.6
SKA2-205ENST00000580541 LHFPL5Q8TAF8 219 aa11.33□□□□□ -0.6
SKA2-205ENST00000580541 ABHD5Q8WTS1 349 aa11.33□□□□□ -0.6
SKA2-205ENST00000580541 OR51J1Q9H342 316 aa11.33□□□□□ -0.6
SKA2-205ENST00000580541 C16orf95Q9H693 158 aa11.33□□□□□ -0.6
SKA2-205ENST00000580541 ZNF257Q9Y2Q1 563 aa11.33□□□□□ -0.6
SKA2-205ENST00000580541 JMJD1CQ15652 2540 aa11.33□□□□□ -0.6
SKA2-205ENST00000580541 C7orf66A4D0T2 115 aa11.32□□□□□ -0.6
SKA2-205ENST00000580541 FCN1O00602 326 aa11.32□□□□□ -0.6
SKA2-205ENST00000580541 COMPP49747 757 aaPredicted RBP11.32□□□□□ -0.6
SKA2-205ENST00000580541 RELBQ01201 579 aa11.32□□□□□ -0.6
SKA2-205ENST00000580541 NMSQ5H8A3 153 aa11.32□□□□□ -0.6
SKA2-205ENST00000580541 GGNBP1Q5YKI7 109 aa11.32□□□□□ -0.6
SKA2-205ENST00000580541 HSD17B13Q7Z5P4 300 aaPredicted RBP11.32□□□□□ -0.6
SKA2-205ENST00000580541 ARPC1AQ92747 370 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms