RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 RAX2Q96IS3 184 aa12.84□□□□□ -0.35
ITGB4-206ENST00000579662 AP5S1Q9NUS5 200 aa12.84□□□□□ -0.35
ITGB4-206ENST00000579662 AMY1AP04745 511 aa12.84□□□□□ -0.35
ITGB4-206ENST00000579662 TSPOP30536 169 aa12.84□□□□□ -0.35
ITGB4-206ENST00000579662 FAM216BQ8N7L0 139 aa12.84□□□□□ -0.35
ITGB4-206ENST00000579662 OR8A1Q8NGG7 326 aa12.84□□□□□ -0.35
ITGB4-206ENST00000579662 EAF1Q96JC9 268 aaPredicted RBP12.84□□□□□ -0.35
ITGB4-206ENST00000579662 ZFP30Q9Y2G7 519 aa12.84□□□□□ -0.35
ITGB4-206ENST00000579662 THSD7BQ9C0I4 1608 aa12.84□□□□□ -0.35
ITGB4-206ENST00000579662 NPIPB3Q92617 1050 aa12.84□□□□□ -0.35
ITGB4-206ENST00000579662 GTF3AQ92664 365 aaKnown RBP12.84□□□□□ -0.35
ITGB4-206ENST00000579662 CYP2G1PQ6ZSU1 146 aa12.83□□□□□ -0.35
ITGB4-206ENST00000579662 PIKFYVEQ9Y2I7 2098 aa12.83□□□□□ -0.35
ITGB4-206ENST00000579662 IGKV3D-15A0A087WSY6 115 aa12.83□□□□□ -0.36
ITGB4-206ENST00000579662 J3QRE1 110 aa12.83□□□□□ -0.36
ITGB4-206ENST00000579662 M0QZK8 103 aa12.83□□□□□ -0.36
ITGB4-206ENST00000579662 GGCTO75223 188 aaKnown RBP12.83□□□□□ -0.36
ITGB4-206ENST00000579662 LINC00271P0C7V0 271 aa12.83□□□□□ -0.36
ITGB4-206ENST00000579662 F12P00748 615 aaPredicted RBP12.83□□□□□ -0.36
ITGB4-206ENST00000579662 IFI27L2Q9H2X8 130 aa12.83□□□□□ -0.36
ITGB4-206ENST00000579662 GCGP01275 180 aa12.83□□□□□ -0.36
ITGB4-206ENST00000579662 CELA3BP08861 270 aa12.83□□□□□ -0.36
ITGB4-206ENST00000579662 GCSHP23434 173 aa12.83□□□□□ -0.36
ITGB4-206ENST00000579662 PUSL1Q8N0Z8 303 aaKnown RBP12.83□□□□□ -0.36
ITGB4-206ENST00000579662 RTBDNQ9BSG5 229 aaPredicted RBP12.83□□□□□ -0.36
ITGB4-206ENST00000579662 H0YL77 283 aa12.83□□□□□ -0.36
ITGB4-206ENST00000579662 LBHQ53QV2 105 aaPredicted RBP12.83□□□□□ -0.36
ITGB4-206ENST00000579662 KLK2P20151 261 aa12.82□□□□□ -0.36
ITGB4-206ENST00000579662 GCHFRP30047 84 aa12.82□□□□□ -0.36
ITGB4-206ENST00000579662 DLX1P56177 255 aa12.82□□□□□ -0.36
ITGB4-206ENST00000579662 FAM131CQ96AQ9 280 aa12.82□□□□□ -0.36
ITGB4-206ENST00000579662 DDB2Q92466 427 aa12.82□□□□□ -0.36
ITGB4-206ENST00000579662 SEC16AO15027 2179 aa12.82□□□□□ -0.36
ITGB4-206ENST00000579662 GREB1Q4ZG55 1949 aa12.82□□□□□ -0.36
ITGB4-206ENST00000579662 TRAV20A0A0B4J274 112 aa12.82□□□□□ -0.36
ITGB4-206ENST00000579662 CD99P14209 185 aa12.82□□□□□ -0.36
ITGB4-206ENST00000579662 TMEM177Q53S58 311 aa12.82□□□□□ -0.36
ITGB4-206ENST00000579662 OR4A47Q6IF82 309 aa12.82□□□□□ -0.36
ITGB4-206ENST00000579662 IL6RP08887 468 aaPredicted RBP12.82□□□□□ -0.36
ITGB4-206ENST00000579662 C2orf68Q2NKX9 166 aa12.82□□□□□ -0.36
ITGB4-206ENST00000579662 ZNF362Q5T0B9 420 aaPredicted RBP12.82□□□□□ -0.36
ITGB4-206ENST00000579662 CCDC88CQ9P219 2028 aa12.82□□□□□ -0.36
ITGB4-206ENST00000579662 TRBV6-7A0A0A0MS04 114 aa12.81□□□□□ -0.36
ITGB4-206ENST00000579662 FAM168AQ92567 244 aa12.81□□□□□ -0.36
ITGB4-206ENST00000579662 SPRR3Q9UBC9 169 aa12.81□□□□□ -0.36
ITGB4-206ENST00000579662 NPIPB6E9PJ23 425 aa12.81□□□□□ -0.36
ITGB4-206ENST00000579662 E9PLN8 166 aa12.81□□□□□ -0.36
ITGB4-206ENST00000579662 ANOS1P23352 680 aa12.81□□□□□ -0.36
ITGB4-206ENST00000579662 CX3CL1P78423 397 aa12.81□□□□□ -0.36
ITGB4-206ENST00000579662 RRN3P1Q2M238 152 aa12.81□□□□□ -0.36
ITGB4-206ENST00000579662 VKORC1Q9BQB6 163 aa12.81□□□□□ -0.36
ITGB4-206ENST00000579662 NPCDR1Q9BY65 106 aa12.81□□□□□ -0.36
ITGB4-206ENST00000579662 RTN4RQ9BZR6 473 aa12.81□□□□□ -0.36
ITGB4-206ENST00000579662 TRBV9A0A0B4J1U6 114 aa12.81□□□□□ -0.36
ITGB4-206ENST00000579662 A6NDN8 102 aa12.81□□□□□ -0.36
ITGB4-206ENST00000579662 TMEM250H0YL14 139 aa12.81□□□□□ -0.36
ITGB4-206ENST00000579662 RELBQ01201 579 aa12.81□□□□□ -0.36
ITGB4-206ENST00000579662 LYZL4Q96KX0 146 aa12.81□□□□□ -0.36
ITGB4-206ENST00000579662 CKS2P33552 79 aa12.81□□□□□ -0.36
ITGB4-206ENST00000579662 RARRES2Q99969 163 aa12.81□□□□□ -0.36
ITGB4-206ENST00000579662 DCTN5Q9BTE1 182 aa12.81□□□□□ -0.36
ITGB4-206ENST00000579662 SCN5AQ14524 2016 aa12.81□□□□□ -0.36
ITGB4-206ENST00000579662 SIAH2O43255 324 aa12.8□□□□□ -0.36
ITGB4-206ENST00000579662 SNRPCP09234 159 aaKnown RBP12.8□□□□□ -0.36
ITGB4-206ENST00000579662 CA7P43166 264 aa12.8□□□□□ -0.36
ITGB4-206ENST00000579662 ZNF506Q5JVG8 444 aa12.8□□□□□ -0.36
ITGB4-206ENST00000579662 HIST1H2BAQ96A08 127 aa12.8□□□□□ -0.36
ITGB4-206ENST00000579662 C17orf98A8MV24 154 aa12.8□□□□□ -0.36
ITGB4-206ENST00000579662 DIRC3C9JPN6 131 aa12.8□□□□□ -0.36
ITGB4-206ENST00000579662 IL4P05112 153 aa12.8□□□□□ -0.36
ITGB4-206ENST00000579662 CRYBB3P26998 211 aa12.8□□□□□ -0.36
ITGB4-206ENST00000579662 CBLN4Q9NTU7 201 aa12.8□□□□□ -0.36
ITGB4-206ENST00000579662 PINLYPA6NC86 204 aa12.8□□□□□ -0.36
ITGB4-206ENST00000579662 YPEL1O60688 119 aa12.8□□□□□ -0.36
ITGB4-206ENST00000579662 ZP1P60852 638 aa12.8□□□□□ -0.36
ITGB4-206ENST00000579662 SNRPD3P62318 126 aaKnown RBP12.8□□□□□ -0.36
ITGB4-206ENST00000579662 SAPCD1Q5SSQ6 148 aa12.8□□□□□ -0.36
ITGB4-206ENST00000579662 CENPVQ7Z7K6 275 aaPredicted RBP12.8□□□□□ -0.36
ITGB4-206ENST00000579662 YPEL2Q96QA6 119 aa12.8□□□□□ -0.36
ITGB4-206ENST00000579662 SEMA5BQ9P283 1151 aa12.8□□□□□ -0.36
ITGB4-206ENST00000579662 A0A087X0M5 115 aa12.8□□□□□ -0.36
ITGB4-206ENST00000579662 A0A1B0GX30 115 aa12.8□□□□□ -0.36
ITGB4-206ENST00000579662 PKIAP61925 76 aa12.8□□□□□ -0.36
ITGB4-206ENST00000579662 RNASEH2CQ8TDP1 164 aaKnown RBP12.8□□□□□ -0.36
ITGB4-206ENST00000579662 AUP1Q9Y679 476 aa12.8□□□□□ -0.36
ITGB4-206ENST00000579662 IFITM10A6NMD0 228 aa12.8□□□□□ -0.36
ITGB4-206ENST00000579662 AGAP20933 346 aa12.8□□□□□ -0.36
ITGB4-206ENST00000579662 Q5BKY6 102 aa12.8□□□□□ -0.36
ITGB4-206ENST00000579662 SLC25A28Q96A46 364 aa12.8□□□□□ -0.36
ITGB4-206ENST00000579662 VENTXO95231 258 aa12.79□□□□□ -0.36
ITGB4-206ENST00000579662 LCN2P80188 198 aa12.79□□□□□ -0.36
ITGB4-206ENST00000579662 FAM53AQ6NSI3 398 aaPredicted RBP12.79□□□□□ -0.36
ITGB4-206ENST00000579662 LINC00305Q7Z4B0 112 aa12.79□□□□□ -0.36
ITGB4-206ENST00000579662 DCAF16Q9NXF7 216 aa12.79□□□□□ -0.36
ITGB4-206ENST00000579662 MOSP00540 346 aa12.79□□□□□ -0.36
ITGB4-206ENST00000579662 DLX6P56179 175 aa12.79□□□□□ -0.36
ITGB4-206ENST00000579662 ZNF841Q6ZN19 808 aa12.79□□□□□ -0.36
ITGB4-206ENST00000579662 PLPPR1Q8TBJ4 325 aa12.79□□□□□ -0.36
ITGB4-206ENST00000579662 PARLQ9H300 379 aa12.79□□□□□ -0.36
ITGB4-206ENST00000579662 RAXQ9Y2V3 346 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms