RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 OR8B3Q8NGG8 313 aa11.39□□□□□ -0.59
SREBF1-217ENST00000577897 FAM110DQ8TAY7 271 aaPredicted RBP11.39□□□□□ -0.59
SREBF1-217ENST00000577897 OR8B2Q96RD0 313 aa11.39□□□□□ -0.59
SREBF1-217ENST00000577897 PARP12Q9H0J9 701 aaKnown RBP11.39□□□□□ -0.59
SREBF1-217ENST00000577897 TNFRSF19Q9NS68 423 aa11.39□□□□□ -0.59
SREBF1-217ENST00000577897 AUP1Q9Y679 476 aa11.39□□□□□ -0.59
SREBF1-217ENST00000577897 ARHGAP32A7KAX9 2087 aa11.39□□□□□ -0.59
SREBF1-217ENST00000577897 IGHV3OR16-10A0A075B7F0 116 aa11.38□□□□□ -0.59
SREBF1-217ENST00000577897 HRASP01112 189 aa11.38□□□□□ -0.59
SREBF1-217ENST00000577897 SELLP14151 372 aa11.38□□□□□ -0.59
SREBF1-217ENST00000577897 NQO2P16083 231 aa11.38□□□□□ -0.59
SREBF1-217ENST00000577897 POLR2GP62487 172 aaKnown RBP eCLIP11.38□□□□□ -0.59
SREBF1-217ENST00000577897 HBG1P69891 147 aa11.38□□□□□ -0.59
SREBF1-217ENST00000577897 HBG2P69892 147 aa11.38□□□□□ -0.59
SREBF1-217ENST00000577897 ZNF816Q0VGE8 651 aaPredicted RBP11.38□□□□□ -0.59
SREBF1-217ENST00000577897 RTL8BQ17RB0 113 aa11.38□□□□□ -0.59
SREBF1-217ENST00000577897 TMEM155Q4W5P6 130 aa11.38□□□□□ -0.59
SREBF1-217ENST00000577897 DHRS7BQ6IAN0 325 aaPredicted RBP11.38□□□□□ -0.59
SREBF1-217ENST00000577897 BTNL3Q6UXE8 466 aa11.38□□□□□ -0.59
SREBF1-217ENST00000577897 LYG1Q8N1E2 194 aa11.38□□□□□ -0.59
SREBF1-217ENST00000577897 OR4F5Q8NH21 305 aa11.38□□□□□ -0.59
SREBF1-217ENST00000577897 GPHA2Q96T91 129 aa11.38□□□□□ -0.59
SREBF1-217ENST00000577897 FBXL17Q9UF56 701 aa11.38□□□□□ -0.59
SREBF1-217ENST00000577897 SOX21Q9Y651 276 aaPredicted RBP11.38□□□□□ -0.59
SREBF1-217ENST00000577897 MDFIC2A0A1B0GVS7 189 aa11.37□□□□□ -0.59
SREBF1-217ENST00000577897 FAM181BA6NEQ2 426 aa11.37□□□□□ -0.59
SREBF1-217ENST00000577897 CHST1O43916 411 aa11.37□□□□□ -0.59
SREBF1-217ENST00000577897 KRASP01116 189 aa11.37□□□□□ -0.59
SREBF1-217ENST00000577897 APOA2P02652 100 aa11.37□□□□□ -0.59
SREBF1-217ENST00000577897 RBP4P02753 201 aa11.37□□□□□ -0.59
SREBF1-217ENST00000577897 CRYBA1P05813 215 aa11.37□□□□□ -0.59
SREBF1-217ENST00000577897 RAB5CP51148 216 aa11.37□□□□□ -0.59
SREBF1-217ENST00000577897 BLOC1S1P78537 153 aa11.37□□□□□ -0.59
SREBF1-217ENST00000577897 SLC25A48Q6ZT89 311 aaKnown RBP11.37□□□□□ -0.59
SREBF1-217ENST00000577897 COMMD7Q86VX2 200 aa11.37□□□□□ -0.59
SREBF1-217ENST00000577897 DMBX1Q8NFW5 382 aa11.37□□□□□ -0.59
SREBF1-217ENST00000577897 OR1S2Q8NGQ3 325 aa11.37□□□□□ -0.59
SREBF1-217ENST00000577897 TNFRSF14Q92956 283 aa11.37□□□□□ -0.59
SREBF1-217ENST00000577897 R3HDM4Q96D70 268 aa11.37□□□□□ -0.59
SREBF1-217ENST00000577897 NEIL1Q96FI4 390 aaPredicted RBP11.37□□□□□ -0.59
SREBF1-217ENST00000577897 SMIM8Q96KF7 97 aa11.37□□□□□ -0.59
SREBF1-217ENST00000577897 CITED4Q96RK1 184 aa11.37□□□□□ -0.59
SREBF1-217ENST00000577897 IFI27L2Q9H2X8 130 aa11.37□□□□□ -0.59
SREBF1-217ENST00000577897 MMP26Q9NRE1 261 aa11.37□□□□□ -0.59
SREBF1-217ENST00000577897 RPS10-NUDT3A0A1W2PQS6 291 aa11.36□□□□□ -0.59
SREBF1-217ENST00000577897 MSGN1A6NI15 193 aa11.36□□□□□ -0.59
SREBF1-217ENST00000577897 C17orf98A8MV24 154 aa11.36□□□□□ -0.59
SREBF1-217ENST00000577897 G3V4G9 280 aa11.36□□□□□ -0.59
SREBF1-217ENST00000577897 FCGR3BO75015 233 aa11.36□□□□□ -0.59
SREBF1-217ENST00000577897 FOXH1O75593 365 aa11.36□□□□□ -0.59
SREBF1-217ENST00000577897 IFNA5P01569 189 aa11.36□□□□□ -0.59
SREBF1-217ENST00000577897 IGKV1-5P01602 117 aa11.36□□□□□ -0.59
SREBF1-217ENST00000577897 IGHV2-70P01814 119 aa11.36□□□□□ -0.59
SREBF1-217ENST00000577897 PRRX1P54821 245 aa11.36□□□□□ -0.59
SREBF1-217ENST00000577897 KRTAP10-3P60369 221 aa11.36□□□□□ -0.59
SREBF1-217ENST00000577897 EWSR1Q01844 656 aaKnown RBP eCLIP11.36□□□□□ -0.59
SREBF1-217ENST00000577897 CXorf66Q5JRM2 361 aaPredicted RBP11.36□□□□□ -0.59
SREBF1-217ENST00000577897 TMEM200BQ69YZ2 307 aa11.36□□□□□ -0.59
SREBF1-217ENST00000577897 LINC00311Q8N616 119 aa11.36□□□□□ -0.59
SREBF1-217ENST00000577897 OR10X1Q8NGY0 326 aa11.36□□□□□ -0.59
SREBF1-217ENST00000577897 OR4A16Q8NH70 328 aa11.36□□□□□ -0.59
SREBF1-217ENST00000577897 SAT2Q96F10 170 aaPredicted RBP11.36□□□□□ -0.59
SREBF1-217ENST00000577897 CYTL1Q9NRR1 136 aa11.36□□□□□ -0.59
SREBF1-217ENST00000577897 C19orf12Q9NSK7 152 aa11.36□□□□□ -0.59
SREBF1-217ENST00000577897 DCAF16Q9NXF7 216 aa11.36□□□□□ -0.59
SREBF1-217ENST00000577897 PSENENQ9NZ42 101 aa11.36□□□□□ -0.59
SREBF1-217ENST00000577897 COL7A1Q02388 2944 aa11.35□□□□□ -0.59
SREBF1-217ENST00000577897 MARCH11A6NNE9 402 aa11.35□□□□□ -0.59
SREBF1-217ENST00000577897 HOXA3O43365 443 aaPredicted RBP11.35□□□□□ -0.59
SREBF1-217ENST00000577897 S1PR2O95136 353 aa11.35□□□□□ -0.59
SREBF1-217ENST00000577897 IGKV1-39P01597 117 aa11.35□□□□□ -0.59
SREBF1-217ENST00000577897 IGKV1D-39P04432 117 aa11.35□□□□□ -0.59
SREBF1-217ENST00000577897 NMBP08949 121 aa11.35□□□□□ -0.59
SREBF1-217ENST00000577897 SEC11BP0C7V7 166 aa11.35□□□□□ -0.59
SREBF1-217ENST00000577897 G6PCP35575 357 aa11.35□□□□□ -0.59
SREBF1-217ENST00000577897 SULT1A1P50225 295 aa11.35□□□□□ -0.59
SREBF1-217ENST00000577897 UBE2KP61086 200 aa11.35□□□□□ -0.59
SREBF1-217ENST00000577897 RPL30P62888 115 aaKnown RBP11.35□□□□□ -0.59
SREBF1-217ENST00000577897 CT45A1Q5HYN5 189 aa11.35□□□□□ -0.59
SREBF1-217ENST00000577897 OR2B11Q5JQS5 317 aa11.35□□□□□ -0.59
SREBF1-217ENST00000577897 PRAMEF5Q5TYX0 476 aa11.35□□□□□ -0.59
SREBF1-217ENST00000577897 SLC25A24Q6NUK1 477 aa11.35□□□□□ -0.59
SREBF1-217ENST00000577897 TMEM252Q8N6L7 170 aa11.35□□□□□ -0.59
SREBF1-217ENST00000577897 OR9G1Q8NH87 305 aa11.35□□□□□ -0.59
SREBF1-217ENST00000577897 CT45A3Q8NHU0 189 aa11.35□□□□□ -0.59
SREBF1-217ENST00000577897 MRAPQ8TCY5 172 aa11.35□□□□□ -0.59
SREBF1-217ENST00000577897 GNPNAT1Q96EK6 184 aaPredicted RBP11.35□□□□□ -0.59
SREBF1-217ENST00000577897 TSNAXQ99598 290 aaKnown RBP11.35□□□□□ -0.59
SREBF1-217ENST00000577897 MAGT1Q9H0U3 335 aa11.35□□□□□ -0.59
SREBF1-217ENST00000577897 SAA2-SAA4A0A096LPE2 208 aa11.34□□□□□ -0.59
SREBF1-217ENST00000577897 CLPSL1A2RUU4 121 aa11.34□□□□□ -0.59
SREBF1-217ENST00000577897 FAM24AA6NFZ4 105 aa11.34□□□□□ -0.59
SREBF1-217ENST00000577897 RAMP3O60896 148 aa11.34□□□□□ -0.59
SREBF1-217ENST00000577897 SAA2P0DJI9 122 aaPredicted RBP11.34□□□□□ -0.59
SREBF1-217ENST00000577897 IGHV4-38-2P0DP08 117 aa11.34□□□□□ -0.59
SREBF1-217ENST00000577897 GNG10P50151 68 aa11.34□□□□□ -0.59
SREBF1-217ENST00000577897 TNFRSF9Q07011 255 aa11.34□□□□□ -0.59
SREBF1-217ENST00000577897 ZNF273Q14593 569 aa11.34□□□□□ -0.59
SREBF1-217ENST00000577897 BEAN1Q3B7T3 259 aa11.34□□□□□ -0.59
SREBF1-217ENST00000577897 NCR3LG1Q68D85 454 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms