RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 GNB4Q9HAV0 340 aa15.02■□□□□ -0
SS18-208ENST00000577751 PLEKHA2Q9HB19 425 aa15.02■□□□□ -0
SS18-208ENST00000577751 VSIG4Q9Y279 399 aa15.02■□□□□ -0
SS18-208ENST00000577751 GSTZ1O43708 216 aaPredicted RBP15.01□□□□□ -0.01
SS18-208ENST00000577751 BRI3O95415 125 aa15.01□□□□□ -0.01
SS18-208ENST00000577751 IL6RP08887 468 aaPredicted RBP15.01□□□□□ -0.01
SS18-208ENST00000577751 NQO2P16083 231 aa15.01□□□□□ -0.01
SS18-208ENST00000577751 F2RP25116 425 aa15.01□□□□□ -0.01
SS18-208ENST00000577751 DEFB136Q30KP8 78 aa15.01□□□□□ -0.01
SS18-208ENST00000577751 STEAP1BQ6NZ63 245 aa15.01□□□□□ -0.01
SS18-208ENST00000577751 SLC38A6Q8IZM9 456 aa15.01□□□□□ -0.01
SS18-208ENST00000577751 POC5Q8NA72 575 aa15.01□□□□□ -0.01
SS18-208ENST00000577751 OR5T1Q8NG75 326 aa15.01□□□□□ -0.01
SS18-208ENST00000577751 DGCR14Q96DF8 476 aaKnown RBP15.01□□□□□ -0.01
SS18-208ENST00000577751 DUX3Q96PT4 197 aa15.01□□□□□ -0.01
SS18-208ENST00000577751 SLA2Q9H6Q3 261 aa15.01□□□□□ -0.01
SS18-208ENST00000577751 BET1LQ9NYM9 111 aa15.01□□□□□ -0.01
SS18-208ENST00000577751 FABP12A6NFH5 140 aa15□□□□□ -0.01
SS18-208ENST00000577751 H3BUA1 57 aa15□□□□□ -0.01
SS18-208ENST00000577751 ACTL6BO94805 426 aa15□□□□□ -0.01
SS18-208ENST00000577751 RAB3DO95716 219 aa15□□□□□ -0.01
SS18-208ENST00000577751 ZNF735P0CB33 412 aa15□□□□□ -0.01
SS18-208ENST00000577751 CD40LGP29965 261 aa15□□□□□ -0.01
SS18-208ENST00000577751 MAS1LP35410 378 aa15□□□□□ -0.01
SS18-208ENST00000577751 FHL3Q13643 280 aa15□□□□□ -0.01
SS18-208ENST00000577751 BEAN1Q3B7T3 259 aa15□□□□□ -0.01
SS18-208ENST00000577751 ZNF585BQ52M93 769 aa15□□□□□ -0.01
SS18-208ENST00000577751 PHLDA2Q53GA4 152 aa15□□□□□ -0.01
SS18-208ENST00000577751 OXLD1Q5BKU9 147 aa15□□□□□ -0.01
SS18-208ENST00000577751 KPRPQ5T749 579 aaPredicted RBP15□□□□□ -0.01
SS18-208ENST00000577751 OR4A47Q6IF82 309 aa15□□□□□ -0.01
SS18-208ENST00000577751 SSX9Q7RTT3 188 aa15□□□□□ -0.01
SS18-208ENST00000577751 C1QL4Q86Z23 238 aa15□□□□□ -0.01
SS18-208ENST00000577751 OR4A5Q8NH83 315 aa15□□□□□ -0.01
SS18-208ENST00000577751 FAM212BQ9NTI7 297 aaPredicted RBP15□□□□□ -0.01
SS18-208ENST00000577751 COMMD9Q9P000 198 aa15□□□□□ -0.01
SS18-208ENST00000577751 S1PR2O95136 353 aa14.99□□□□□ -0.01
SS18-208ENST00000577751 DEFA6Q01524 100 aa14.99□□□□□ -0.01
SS18-208ENST00000577751 C10orf55Q5SWW7 151 aa14.99□□□□□ -0.01
SS18-208ENST00000577751 TERB2Q8NHR7 220 aa14.99□□□□□ -0.01
SS18-208ENST00000577751 RCC1LQ96I51 464 aaKnown RBP14.99□□□□□ -0.01
SS18-208ENST00000577751 MS4A10Q96PG2 267 aa14.99□□□□□ -0.01
SS18-208ENST00000577751 NOTCH1P46531 2555 aa14.99□□□□□ -0.01
SS18-208ENST00000577751 MEGF8Q7Z7M0 2845 aa14.98□□□□□ -0.01
SS18-208ENST00000577751 NOTCH3Q9UM47 2321 aa14.98□□□□□ -0.01
SS18-208ENST00000577751 E7EUB6 86 aa14.98□□□□□ -0.01
SS18-208ENST00000577751 IGLL1P15814 213 aa14.98□□□□□ -0.01
SS18-208ENST00000577751 S100GP29377 79 aa14.98□□□□□ -0.01
SS18-208ENST00000577751 MEF2DQ14814 521 aa14.98□□□□□ -0.01
SS18-208ENST00000577751 TBC1D26Q86UD7 250 aa14.98□□□□□ -0.01
SS18-208ENST00000577751 CADM3Q8N126 398 aa14.98□□□□□ -0.01
SS18-208ENST00000577751 ADAD2Q8NCV1 583 aaKnown RBP14.98□□□□□ -0.01
SS18-208ENST00000577751 OR11H1Q8NG94 326 aa14.98□□□□□ -0.01
SS18-208ENST00000577751 ZNF486Q96H40 463 aaPredicted RBP14.98□□□□□ -0.01
SS18-208ENST00000577751 PHB2Q99623 299 aa14.98□□□□□ -0.01
SS18-208ENST00000577751 SPIN2AQ99865 258 aa14.98□□□□□ -0.01
SS18-208ENST00000577751 SPIN2BQ9BPZ2 258 aa14.98□□□□□ -0.01
SS18-208ENST00000577751 SLC2A9Q9NRM0 540 aa14.98□□□□□ -0.01
SS18-208ENST00000577751 ANKRD20A5PA0PJZ0 165 aa14.97□□□□□ -0.01
SS18-208ENST00000577751 TEX22C9J3V5 150 aa14.97□□□□□ -0.01
SS18-208ENST00000577751 DUS4LO95620 317 aaKnown RBP14.97□□□□□ -0.01
SS18-208ENST00000577751 FGF2P09038 288 aa14.97□□□□□ -0.01
SS18-208ENST00000577751 OR9G9P0C7N8 305 aa14.97□□□□□ -0.01
SS18-208ENST00000577751 APELAP0DMC3 54 aa14.97□□□□□ -0.01
SS18-208ENST00000577751 PTBP1P26599 531 aaKnown RBP eCLIP14.97□□□□□ -0.01
SS18-208ENST00000577751 LPAR6P43657 344 aa14.97□□□□□ -0.01
SS18-208ENST00000577751 TPPP2P59282 170 aa14.97□□□□□ -0.01
SS18-208ENST00000577751 RND3P61587 244 aa14.97□□□□□ -0.01
SS18-208ENST00000577751 RPL8P62917 257 aaKnown RBP14.97□□□□□ -0.01
SS18-208ENST00000577751 MRGPRFQ96AM1 343 aa14.97□□□□□ -0.01
SS18-208ENST00000577751 NDUFA13Q9P0J0 144 aa14.97□□□□□ -0.01
SS18-208ENST00000577751 V9GYH0 126 aa14.97□□□□□ -0.01
SS18-208ENST00000577751 A0A1B0GW64 132 aa14.96□□□□□ -0.01
SS18-208ENST00000577751 UPK2O00526 184 aa14.96□□□□□ -0.01
SS18-208ENST00000577751 TRGV3P03979 118 aa14.96□□□□□ -0.01
SS18-208ENST00000577751 LGALS1P09382 135 aaKnown RBP14.96□□□□□ -0.01
SS18-208ENST00000577751 AKAIN1P0CW23 69 aa14.96□□□□□ -0.01
SS18-208ENST00000577751 HLA-GP17693 338 aa14.96□□□□□ -0.01
SS18-208ENST00000577751 S100A5P33763 92 aa14.96□□□□□ -0.01
SS18-208ENST00000577751 RPL27AP46776 148 aaKnown RBP14.96□□□□□ -0.01
SS18-208ENST00000577751 FAAP20Q6NZ36 180 aa14.96□□□□□ -0.01
SS18-208ENST00000577751 CCDC190Q86UF4 302 aa14.96□□□□□ -0.01
SS18-208ENST00000577751 TTC9CQ8N5M4 171 aa14.96□□□□□ -0.01
SS18-208ENST00000577751 OR1N2Q8NGR9 330 aa14.96□□□□□ -0.01
SS18-208ENST00000577751 OR5B12Q96R08 314 aa14.96□□□□□ -0.01
SS18-208ENST00000577751 HRASLSQ9HDD0 168 aa14.96□□□□□ -0.01
SS18-208ENST00000577751 ZNF355PQ9NSJ1 428 aa14.96□□□□□ -0.01
SS18-208ENST00000577751 TMEM140Q9NV12 185 aa14.96□□□□□ -0.01
SS18-208ENST00000577751 TRAV3A0A0B4J244 114 aa14.95□□□□□ -0.02
SS18-208ENST00000577751 CGB1A6NKQ9 187 aa14.95□□□□□ -0.02
SS18-208ENST00000577751 MARCH11A6NNE9 402 aa14.95□□□□□ -0.02
SS18-208ENST00000577751 MPPED1O15442 326 aa14.95□□□□□ -0.02
SS18-208ENST00000577751 PGAM2P15259 253 aa14.95□□□□□ -0.02
SS18-208ENST00000577751 ZNF79Q15937 498 aa14.95□□□□□ -0.02
SS18-208ENST00000577751 SCGB2B2Q4G0G5 96 aa14.95□□□□□ -0.02
SS18-208ENST00000577751 DMBX1Q8NFW5 382 aa14.95□□□□□ -0.02
SS18-208ENST00000577751 OR4C16Q8NGL9 310 aa14.95□□□□□ -0.02
SS18-208ENST00000577751 THAP7Q9BT49 309 aaPredicted RBP14.95□□□□□ -0.02
SS18-208ENST00000577751 ALX4Q9H161 411 aaPredicted RBP14.95□□□□□ -0.02
SS18-208ENST00000577751 DPPA5A6NC42 116 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms