RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 GP9P14770 177 aa11.91□□□□□ -0.5
SF3B3-215ENST00000577085 RPL27AP46776 148 aaKnown RBP11.91□□□□□ -0.5
SF3B3-215ENST00000577085 SYNJ2BPP57105 145 aa11.91□□□□□ -0.5
SF3B3-215ENST00000577085 VBP1P61758 197 aa11.91□□□□□ -0.5
SF3B3-215ENST00000577085 NCS1P62166 190 aa11.91□□□□□ -0.5
SF3B3-215ENST00000577085 EIF4EBP1Q13541 118 aaPredicted RBP11.91□□□□□ -0.5
SF3B3-215ENST00000577085 DYRK1AQ13627 763 aa11.91□□□□□ -0.5
SF3B3-215ENST00000577085 C10orf55Q5SWW7 151 aa11.91□□□□□ -0.5
SF3B3-215ENST00000577085 TTC9CQ8N5M4 171 aa11.91□□□□□ -0.5
SF3B3-215ENST00000577085 OR9G4Q8NGQ1 327 aa11.91□□□□□ -0.5
SF3B3-215ENST00000577085 OR51H1Q8NH63 302 aa11.91□□□□□ -0.5
SF3B3-215ENST00000577085 TMEM167AQ8TBQ9 72 aa11.91□□□□□ -0.5
SF3B3-215ENST00000577085 ZNF257Q9Y2Q1 563 aa11.91□□□□□ -0.5
SF3B3-215ENST00000577085 PMP2P02689 132 aa11.9□□□□□ -0.5
SF3B3-215ENST00000577085 RPL8P62917 257 aaKnown RBP11.9□□□□□ -0.5
SF3B3-215ENST00000577085 EXOSC2Q13868 293 aaKnown RBP11.9□□□□□ -0.5
SF3B3-215ENST00000577085 ZNF818PQ6ZRF7 136 aa11.9□□□□□ -0.5
SF3B3-215ENST00000577085 CMTM1Q8IZ96 169 aa11.9□□□□□ -0.5
SF3B3-215ENST00000577085 PUSL1Q8N0Z8 303 aaKnown RBP11.9□□□□□ -0.5
SF3B3-215ENST00000577085 NECAP1Q8NC96 275 aa11.9□□□□□ -0.5
SF3B3-215ENST00000577085 DMBX1Q8NFW5 382 aa11.9□□□□□ -0.5
SF3B3-215ENST00000577085 OR4A5Q8NH83 315 aa11.9□□□□□ -0.5
SF3B3-215ENST00000577085 CD300LFQ8TDQ1 290 aa11.9□□□□□ -0.5
SF3B3-215ENST00000577085 ZNF2Q9BSG1 426 aaPredicted RBP11.9□□□□□ -0.5
SF3B3-215ENST00000577085 AKIP1Q9NQ31 210 aa11.9□□□□□ -0.5
SF3B3-215ENST00000577085 HMX3A6NHT5 357 aa11.89□□□□□ -0.51
SF3B3-215ENST00000577085 RBFOX2O43251 390 aaKnown RBP eCLIP11.89□□□□□ -0.51
SF3B3-215ENST00000577085 OR2J3O76001 311 aa11.89□□□□□ -0.51
SF3B3-215ENST00000577085 HPRT1P00492 218 aa11.89□□□□□ -0.51
SF3B3-215ENST00000577085 DEFA4P12838 97 aa11.89□□□□□ -0.51
SF3B3-215ENST00000577085 NQO2P16083 231 aa11.89□□□□□ -0.51
SF3B3-215ENST00000577085 RFX2P48378 723 aa11.89□□□□□ -0.51
SF3B3-215ENST00000577085 RORCP51449 518 aa11.89□□□□□ -0.51
SF3B3-215ENST00000577085 TAS2R31P59538 309 aa11.89□□□□□ -0.51
SF3B3-215ENST00000577085 KLF5Q13887 457 aaPredicted RBP11.89□□□□□ -0.51
SF3B3-215ENST00000577085 C15orf32Q32M92 178 aa11.89□□□□□ -0.51
SF3B3-215ENST00000577085 FAM209BQ5JX69 171 aa11.89□□□□□ -0.51
SF3B3-215ENST00000577085 OR4A47Q6IF82 309 aa11.89□□□□□ -0.51
SF3B3-215ENST00000577085 OR6F1Q8NGZ6 308 aa11.89□□□□□ -0.51
SF3B3-215ENST00000577085 ASCL2Q99929 193 aa11.89□□□□□ -0.51
SF3B3-215ENST00000577085 PEMTQ9UBM1 199 aa11.89□□□□□ -0.51
SF3B3-215ENST00000577085 U3KQK5 164 aa11.89□□□□□ -0.51
SF3B3-215ENST00000577085 TRBV12-3P01733 135 aa11.88□□□□□ -0.51
SF3B3-215ENST00000577085 APOA1P02647 267 aa11.88□□□□□ -0.51
SF3B3-215ENST00000577085 EIF4EP06730 217 aaKnown RBP11.88□□□□□ -0.51
SF3B3-215ENST00000577085 HLA-GP17693 338 aa11.88□□□□□ -0.51
SF3B3-215ENST00000577085 S100GP29377 79 aa11.88□□□□□ -0.51
SF3B3-215ENST00000577085 BRWD1-AS2P59051 145 aa11.88□□□□□ -0.51
SF3B3-215ENST00000577085 ERVK-16P61578 105 aa11.88□□□□□ -0.51
SF3B3-215ENST00000577085 TSPAN5P62079 268 aa11.88□□□□□ -0.51
SF3B3-215ENST00000577085 MZT2AQ6P582 158 aa11.88□□□□□ -0.51
SF3B3-215ENST00000577085 HAPLN4Q86UW8 402 aa11.88□□□□□ -0.51
SF3B3-215ENST00000577085 AP3S1Q92572 193 aa11.88□□□□□ -0.51
SF3B3-215ENST00000577085 CMTM3Q96MX0 182 aa11.88□□□□□ -0.51
SF3B3-215ENST00000577085 WWC2-AS2Q96NR7 200 aa11.88□□□□□ -0.51
SF3B3-215ENST00000577085 COMMD5Q9GZQ3 224 aa11.88□□□□□ -0.51
SF3B3-215ENST00000577085 SLC2A9Q9NRM0 540 aa11.88□□□□□ -0.51
SF3B3-215ENST00000577085 BET1LQ9NYM9 111 aa11.88□□□□□ -0.51
SF3B3-215ENST00000577085 TRBV9A0A0B4J1U6 114 aa11.87□□□□□ -0.51
SF3B3-215ENST00000577085 TRIM64CA6NLI5 447 aa11.87□□□□□ -0.51
SF3B3-215ENST00000577085 NPIPB5A8MRT5 1133 aa11.87□□□□□ -0.51
SF3B3-215ENST00000577085 FAM25AB3EWG3 89 aa11.87□□□□□ -0.51
SF3B3-215ENST00000577085 FAM25CB3EWG5 89 aa11.87□□□□□ -0.51
SF3B3-215ENST00000577085 FAM25GB3EWG6 89 aa11.87□□□□□ -0.51
SF3B3-215ENST00000577085 TEX22C9J3V5 150 aa11.87□□□□□ -0.51
SF3B3-215ENST00000577085 H0Y980 276 aa11.87□□□□□ -0.51
SF3B3-215ENST00000577085 IGLV1-51P01701 117 aa11.87□□□□□ -0.51
SF3B3-215ENST00000577085 RLN1P04808 185 aa11.87□□□□□ -0.51
SF3B3-215ENST00000577085 ZNF735P0CB33 412 aa11.87□□□□□ -0.51
SF3B3-215ENST00000577085 HLA-DMAP28067 261 aa11.87□□□□□ -0.51
SF3B3-215ENST00000577085 HRH1P35367 487 aa11.87□□□□□ -0.51
SF3B3-215ENST00000577085 ZNF45Q02386 682 aa11.87□□□□□ -0.51
SF3B3-215ENST00000577085 DHRS11Q6UWP2 260 aa11.87□□□□□ -0.51
SF3B3-215ENST00000577085 SNX29P2Q8IUI4 249 aa11.87□□□□□ -0.51
SF3B3-215ENST00000577085 MOB3AQ96BX8 217 aa11.87□□□□□ -0.51
SF3B3-215ENST00000577085 SCPEP1Q9HB40 452 aa11.87□□□□□ -0.51
SF3B3-215ENST00000577085 FBXL7Q9UJT9 491 aa11.87□□□□□ -0.51
SF3B3-215ENST00000577085 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.86□□□□□ -0.51
SF3B3-215ENST00000577085 RBMXL2O75526 392 aaKnown RBP11.86□□□□□ -0.51
SF3B3-215ENST00000577085 IL6RP08887 468 aaPredicted RBP11.86□□□□□ -0.51
SF3B3-215ENST00000577085 HIST1H1BP16401 226 aaKnown RBP11.86□□□□□ -0.51
SF3B3-215ENST00000577085 PSMB6P28072 239 aa11.86□□□□□ -0.51
SF3B3-215ENST00000577085 GNRHRP30968 328 aa11.86□□□□□ -0.51
SF3B3-215ENST00000577085 PLEKHA2Q9HB19 425 aa11.86□□□□□ -0.51
SF3B3-215ENST00000577085 TMEM140Q9NV12 185 aa11.86□□□□□ -0.51
SF3B3-215ENST00000577085 COMMD9Q9P000 198 aa11.86□□□□□ -0.51
SF3B3-215ENST00000577085 CYB5BO43169 146 aa11.85□□□□□ -0.51
SF3B3-215ENST00000577085 HPGDSO60760 199 aa11.85□□□□□ -0.51
SF3B3-215ENST00000577085 S1PR2O95136 353 aa11.85□□□□□ -0.51
SF3B3-215ENST00000577085 REG1AP05451 166 aa11.85□□□□□ -0.51
SF3B3-215ENST00000577085 AREGP15514 252 aa11.85□□□□□ -0.51
SF3B3-215ENST00000577085 NAT1P18440 290 aa11.85□□□□□ -0.51
SF3B3-215ENST00000577085 LCN12Q6JVE5 192 aa11.85□□□□□ -0.51
SF3B3-215ENST00000577085 LPCAT3Q6P1A2 487 aa11.85□□□□□ -0.51
SF3B3-215ENST00000577085 GTSCR1Q86UQ5 136 aa11.85□□□□□ -0.51
SF3B3-215ENST00000577085 SGPP2Q8IWX5 399 aa11.85□□□□□ -0.51
SF3B3-215ENST00000577085 EEF1AKMT3Q96AZ1 226 aa11.85□□□□□ -0.51
SF3B3-215ENST00000577085 ADAM30Q9UKF2 790 aa11.85□□□□□ -0.51
SF3B3-215ENST00000577085 ANAPC10Q9UM13 185 aa11.85□□□□□ -0.51
SF3B3-215ENST00000577085 E7EUB6 86 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms