RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 IFITM3Q01628 133 aa11.04□□□□□ -0.64
RPAIN-217ENST00000575711 PJVKQ0ZLH3 352 aa11.04□□□□□ -0.64
RPAIN-217ENST00000575711 PRSS8Q16651 343 aa11.04□□□□□ -0.64
RPAIN-217ENST00000575711 TMEM128Q5BJH2 165 aa11.04□□□□□ -0.64
RPAIN-217ENST00000575711 OR4A47Q6IF82 309 aa11.04□□□□□ -0.64
RPAIN-217ENST00000575711 KLHDC1Q8N7A1 406 aa11.04□□□□□ -0.64
RPAIN-217ENST00000575711 TMEM167AQ8TBQ9 72 aa11.04□□□□□ -0.64
RPAIN-217ENST00000575711 ABHD5Q8WTS1 349 aa11.04□□□□□ -0.64
RPAIN-217ENST00000575711 CHPT1Q8WUD6 406 aa11.04□□□□□ -0.64
RPAIN-217ENST00000575711 GALNT14Q96FL9 552 aa11.04□□□□□ -0.64
RPAIN-217ENST00000575711 GON7Q9BXV9 100 aa11.04□□□□□ -0.64
RPAIN-217ENST00000575711 TMEM222Q9H0R3 208 aa11.04□□□□□ -0.64
RPAIN-217ENST00000575711 TMEM140Q9NV12 185 aa11.04□□□□□ -0.64
RPAIN-217ENST00000575711 ARPC1BO15143 372 aaKnown RBP11.03□□□□□ -0.64
RPAIN-217ENST00000575711 ATP6V0E1O15342 81 aa11.03□□□□□ -0.64
RPAIN-217ENST00000575711 IGF1P05019 195 aa11.03□□□□□ -0.64
RPAIN-217ENST00000575711 VDAC1P21796 283 aa11.03□□□□□ -0.64
RPAIN-217ENST00000575711 FXYD3Q14802 87 aa11.03□□□□□ -0.64
RPAIN-217ENST00000575711 TNXAQ16473 311 aa11.03□□□□□ -0.64
RPAIN-217ENST00000575711 CENPVQ7Z7K6 275 aaPredicted RBP11.03□□□□□ -0.64
RPAIN-217ENST00000575711 STPG2Q8N412 459 aa11.03□□□□□ -0.64
RPAIN-217ENST00000575711 C3orf56Q8N813 242 aa11.03□□□□□ -0.64
RPAIN-217ENST00000575711 ENKURQ8TC29 256 aa11.03□□□□□ -0.64
RPAIN-217ENST00000575711 WFDC12Q8WWY7 111 aa11.03□□□□□ -0.64
RPAIN-217ENST00000575711 ARPC1AQ92747 370 aa11.03□□□□□ -0.64
RPAIN-217ENST00000575711 NOL4LQ96MY1 436 aaPredicted RBP11.03□□□□□ -0.64
RPAIN-217ENST00000575711 WNT10AQ9GZT5 417 aa11.03□□□□□ -0.64
RPAIN-217ENST00000575711 C20orf85Q9H1P6 137 aa11.03□□□□□ -0.64
RPAIN-217ENST00000575711 ZNF430Q9H8G1 570 aaPredicted RBP11.03□□□□□ -0.64
RPAIN-217ENST00000575711 LINC00527Q9UJ94 153 aa11.03□□□□□ -0.64
RPAIN-217ENST00000575711 ZNF580Q9UK33 172 aa11.03□□□□□ -0.64
RPAIN-217ENST00000575711 FLVCR2Q9UPI3 526 aa11.03□□□□□ -0.64
RPAIN-217ENST00000575711 CDS2O95674 445 aa11.02□□□□□ -0.65
RPAIN-217ENST00000575711 IGKV1-39P01597 117 aa11.02□□□□□ -0.65
RPAIN-217ENST00000575711 IGKV1D-39P04432 117 aa11.02□□□□□ -0.65
RPAIN-217ENST00000575711 TCRBP04435 133 aa11.02□□□□□ -0.65
RPAIN-217ENST00000575711 VAMP1P23763 118 aa11.02□□□□□ -0.65
RPAIN-217ENST00000575711 AKR1C2P52895 323 aa11.02□□□□□ -0.65
RPAIN-217ENST00000575711 UBE2MP61081 183 aaKnown RBP11.02□□□□□ -0.65
RPAIN-217ENST00000575711 RPL8P62917 257 aaKnown RBP11.02□□□□□ -0.65
RPAIN-217ENST00000575711 SUPT4H1P63272 117 aaKnown RBP11.02□□□□□ -0.65
RPAIN-217ENST00000575711 SLC35B1P78383 322 aa11.02□□□□□ -0.65
RPAIN-217ENST00000575711 NDPQ00604 133 aa11.02□□□□□ -0.65
RPAIN-217ENST00000575711 MRGPRG-AS1Q2M3A8 158 aa11.02□□□□□ -0.65
RPAIN-217ENST00000575711 H2BFWTQ7Z2G1 175 aa11.02□□□□□ -0.65
RPAIN-217ENST00000575711 SLC25A42Q86VD7 318 aa11.02□□□□□ -0.65
RPAIN-217ENST00000575711 ZNF695Q8IW36 515 aa11.02□□□□□ -0.65
RPAIN-217ENST00000575711 CADM3Q8N126 398 aa11.02□□□□□ -0.65
RPAIN-217ENST00000575711 RNASE11Q8TAA1 199 aaKnown RBP11.02□□□□□ -0.65
RPAIN-217ENST00000575711 GRPEL2Q8TAA5 225 aa11.02□□□□□ -0.65
RPAIN-217ENST00000575711 GLYATL2Q8WU03 294 aa11.02□□□□□ -0.65
RPAIN-217ENST00000575711 SEC22AQ96IW7 307 aa11.02□□□□□ -0.65
RPAIN-217ENST00000575711 PSMB11A5LHX3 300 aa11.01□□□□□ -0.65
RPAIN-217ENST00000575711 UPK2O00526 184 aa11.01□□□□□ -0.65
RPAIN-217ENST00000575711 SNAPC5O75971 98 aa11.01□□□□□ -0.65
RPAIN-217ENST00000575711 HLA-GP17693 338 aa11.01□□□□□ -0.65
RPAIN-217ENST00000575711 MAS1LP35410 378 aa11.01□□□□□ -0.65
RPAIN-217ENST00000575711 SRPXP78539 464 aa11.01□□□□□ -0.65
RPAIN-217ENST00000575711 TMEM267Q0VDI3 215 aaPredicted RBP11.01□□□□□ -0.65
RPAIN-217ENST00000575711 TMEM187Q14656 261 aa11.01□□□□□ -0.65
RPAIN-217ENST00000575711 SGMS2Q8NHU3 365 aa11.01□□□□□ -0.65
RPAIN-217ENST00000575711 RBPMSQ93062 196 aaKnown RBP11.01□□□□□ -0.65
RPAIN-217ENST00000575711 RRNAD1Q96FB5 475 aaKnown RBP11.01□□□□□ -0.65
RPAIN-217ENST00000575711 PHB2Q99623 299 aa11.01□□□□□ -0.65
RPAIN-217ENST00000575711 FAM103A1Q9BTL3 118 aaKnown RBP11.01□□□□□ -0.65
RPAIN-217ENST00000575711 WSB1Q9Y6I7 421 aa11.01□□□□□ -0.65
RPAIN-217ENST00000575711 TRAV6A0A075B6T7 132 aa11□□□□□ -0.65
RPAIN-217ENST00000575711 TRAV3A0A0B4J244 114 aa11□□□□□ -0.65
RPAIN-217ENST00000575711 TRAV41A0A0B4J266 112 aa11□□□□□ -0.65
RPAIN-217ENST00000575711 PIGBOS1A0A0B4J2F0 54 aa11□□□□□ -0.65
RPAIN-217ENST00000575711 SFT2D2O95562 160 aa11□□□□□ -0.65
RPAIN-217ENST00000575711 IL6RP08887 468 aaPredicted RBP11□□□□□ -0.65
RPAIN-217ENST00000575711 FGF2P09038 288 aa11□□□□□ -0.65
RPAIN-217ENST00000575711 ANXA7P20073 488 aaKnown RBP11□□□□□ -0.65
RPAIN-217ENST00000575711 CRIP2P52943 208 aaPredicted RBP11□□□□□ -0.65
RPAIN-217ENST00000575711 SSBP2P81877 361 aaPredicted RBP11□□□□□ -0.65
RPAIN-217ENST00000575711 PPP1R1AQ13522 171 aa11□□□□□ -0.65
RPAIN-217ENST00000575711 ECSCRQ19T08 205 aa11□□□□□ -0.65
RPAIN-217ENST00000575711 TMEM268Q5VZI3 342 aa11□□□□□ -0.65
RPAIN-217ENST00000575711 ZNF329Q86UD4 541 aa11□□□□□ -0.65
RPAIN-217ENST00000575711 SELENOHQ8IZQ5 122 aaKnown RBP11□□□□□ -0.65
RPAIN-217ENST00000575711 LGI3Q8N145 548 aa11□□□□□ -0.65
RPAIN-217ENST00000575711 OR5AU1Q8NGC0 362 aa11□□□□□ -0.65
RPAIN-217ENST00000575711 OR4X2Q8NGF9 303 aa11□□□□□ -0.65
RPAIN-217ENST00000575711 LHFPL5Q8TAF8 219 aa11□□□□□ -0.65
RPAIN-217ENST00000575711 SRSF12Q8WXF0 261 aaKnown RBP11□□□□□ -0.65
RPAIN-217ENST00000575711 IL22RA2Q969J5 263 aa11□□□□□ -0.65
RPAIN-217ENST00000575711 TMEM56Q96MV1 263 aa11□□□□□ -0.65
RPAIN-217ENST00000575711 ZNF747Q9BV97 191 aa11□□□□□ -0.65
RPAIN-217ENST00000575711 NUDT15Q9NV35 164 aa11□□□□□ -0.65
RPAIN-217ENST00000575711 FBXO7Q9Y3I1 522 aa11□□□□□ -0.65
RPAIN-217ENST00000575711 NUBP2Q9Y5Y2 271 aa11□□□□□ -0.65
RPAIN-217ENST00000575711 TMEM56-RWDD3S4R434 201 aa11□□□□□ -0.65
RPAIN-217ENST00000575711 G3V318 75 aa10.99□□□□□ -0.65
RPAIN-217ENST00000575711 FBXO24O75426 580 aa10.99□□□□□ -0.65
RPAIN-217ENST00000575711 IGKV1-5P01602 117 aa10.99□□□□□ -0.65
RPAIN-217ENST00000575711 HLA-AP01891 365 aaKnown RBP10.99□□□□□ -0.65
RPAIN-217ENST00000575711 H2AFB2P0C5Z0 115 aa10.99□□□□□ -0.65
RPAIN-217ENST00000575711 OR4E1P0C645 316 aa10.99□□□□□ -0.65
RPAIN-217ENST00000575711 OR9G9P0C7N8 305 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms