RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 OR2A4O95047 310 aa10.57□□□□□ -0.72
CIITA-210ENST00000575513 HPRT1P00492 218 aa10.57□□□□□ -0.72
CIITA-210ENST00000575513 FGF2P09038 288 aa10.57□□□□□ -0.72
CIITA-210ENST00000575513 ZNF735P0CB33 412 aa10.57□□□□□ -0.72
CIITA-210ENST00000575513 AKAIN1P0CW23 69 aa10.57□□□□□ -0.72
CIITA-210ENST00000575513 SAA1P0DJI8 122 aaPredicted RBP10.57□□□□□ -0.72
CIITA-210ENST00000575513 MAS1LP35410 378 aa10.57□□□□□ -0.72
CIITA-210ENST00000575513 TAS2R31P59538 309 aa10.57□□□□□ -0.72
CIITA-210ENST00000575513 DEFA6Q01524 100 aa10.57□□□□□ -0.72
CIITA-210ENST00000575513 BEAN1Q3B7T3 259 aa10.57□□□□□ -0.72
CIITA-210ENST00000575513 SPAG16Q8N0X2 631 aa10.57□□□□□ -0.72
CIITA-210ENST00000575513 PUSL1Q8N0Z8 303 aaKnown RBP10.57□□□□□ -0.72
CIITA-210ENST00000575513 CADM3Q8N126 398 aa10.57□□□□□ -0.72
CIITA-210ENST00000575513 Q8N402 240 aa10.57□□□□□ -0.72
CIITA-210ENST00000575513 GDPD1Q8N9F7 314 aa10.57□□□□□ -0.72
CIITA-210ENST00000575513 OR4A5Q8NH83 315 aa10.57□□□□□ -0.72
CIITA-210ENST00000575513 GRPEL2Q8TAA5 225 aa10.57□□□□□ -0.72
CIITA-210ENST00000575513 DEDD2Q8WXF8 326 aa10.57□□□□□ -0.72
CIITA-210ENST00000575513 TRIM63Q969Q1 353 aa10.57□□□□□ -0.72
CIITA-210ENST00000575513 RAX2Q96IS3 184 aa10.57□□□□□ -0.72
CIITA-210ENST00000575513 RHOVQ96L33 236 aa10.57□□□□□ -0.72
CIITA-210ENST00000575513 OR2A7Q96R45 310 aa10.57□□□□□ -0.72
CIITA-210ENST00000575513 FAM103A1Q9BTL3 118 aaKnown RBP10.57□□□□□ -0.72
CIITA-210ENST00000575513 MCRIP2Q9BUT9 160 aaKnown RBP10.57□□□□□ -0.72
CIITA-210ENST00000575513 GPR61Q9BZJ8 451 aa10.57□□□□□ -0.72
CIITA-210ENST00000575513 SRRQ9GZT4 340 aa10.57□□□□□ -0.72
CIITA-210ENST00000575513 PLEKHA2Q9HB19 425 aa10.57□□□□□ -0.72
CIITA-210ENST00000575513 G3V4G9 280 aa10.56□□□□□ -0.72
CIITA-210ENST00000575513 I3L521 148 aa10.56□□□□□ -0.72
CIITA-210ENST00000575513 GPR31O00270 319 aa10.56□□□□□ -0.72
CIITA-210ENST00000575513 PGLYRP1O75594 196 aaPredicted RBP10.56□□□□□ -0.72
CIITA-210ENST00000575513 ACTL6BO94805 426 aa10.56□□□□□ -0.72
CIITA-210ENST00000575513 S100GP29377 79 aa10.56□□□□□ -0.72
CIITA-210ENST00000575513 AP3S2P59780 193 aa10.56□□□□□ -0.72
CIITA-210ENST00000575513 GNB1P62873 340 aa10.56□□□□□ -0.72
CIITA-210ENST00000575513 ZNF45Q02386 682 aa10.56□□□□□ -0.72
CIITA-210ENST00000575513 FHL3Q13643 280 aa10.56□□□□□ -0.72
CIITA-210ENST00000575513 POU2AF1Q16633 256 aa10.56□□□□□ -0.72
CIITA-210ENST00000575513 OR2B11Q5JQS5 317 aa10.56□□□□□ -0.72
CIITA-210ENST00000575513 AADACL3Q5VUY0 350 aa10.56□□□□□ -0.72
CIITA-210ENST00000575513 IDO2Q6ZQW0 420 aa10.56□□□□□ -0.72
CIITA-210ENST00000575513 OR4D10Q8NGI6 311 aa10.56□□□□□ -0.72
CIITA-210ENST00000575513 TERB2Q8NHR7 220 aa10.56□□□□□ -0.72
CIITA-210ENST00000575513 TMEM167AQ8TBQ9 72 aa10.56□□□□□ -0.72
CIITA-210ENST00000575513 SPIN2AQ99865 258 aa10.56□□□□□ -0.72
CIITA-210ENST00000575513 SPIN2BQ9BPZ2 258 aa10.56□□□□□ -0.72
CIITA-210ENST00000575513 RSRP1Q9BUV0 290 aa10.56□□□□□ -0.72
CIITA-210ENST00000575513 ZNF430Q9H8G1 570 aaPredicted RBP10.56□□□□□ -0.72
CIITA-210ENST00000575513 FAM212BQ9NTI7 297 aaPredicted RBP10.56□□□□□ -0.72
CIITA-210ENST00000575513 BET1LQ9NYM9 111 aa10.56□□□□□ -0.72
CIITA-210ENST00000575513 PTTG2Q9NZH5 202 aa10.56□□□□□ -0.72
CIITA-210ENST00000575513 MSGN1A6NI15 193 aa10.55□□□□□ -0.72
CIITA-210ENST00000575513 DISC1C4P0D8 188 aa10.55□□□□□ -0.72
CIITA-210ENST00000575513 RAMP3O60896 148 aa10.55□□□□□ -0.72
CIITA-210ENST00000575513 KBTBD11O94819 623 aa10.55□□□□□ -0.72
CIITA-210ENST00000575513 NQO2P16083 231 aa10.55□□□□□ -0.72
CIITA-210ENST00000575513 F2RP25116 425 aa10.55□□□□□ -0.72
CIITA-210ENST00000575513 KLF9Q13886 244 aaPredicted RBP10.55□□□□□ -0.72
CIITA-210ENST00000575513 TNXAQ16473 311 aa10.55□□□□□ -0.72
CIITA-210ENST00000575513 OXLD1Q5BKU9 147 aa10.55□□□□□ -0.72
CIITA-210ENST00000575513 SLC38A6Q8IZM9 456 aa10.55□□□□□ -0.72
CIITA-210ENST00000575513 OR4C16Q8NGL9 310 aa10.55□□□□□ -0.72
CIITA-210ENST00000575513 SRSF12Q8WXF0 261 aaKnown RBP10.55□□□□□ -0.72
CIITA-210ENST00000575513 GPHA2Q96T91 129 aa10.55□□□□□ -0.72
CIITA-210ENST00000575513 SLC2A8Q9NY64 477 aa10.55□□□□□ -0.72
CIITA-210ENST00000575513 COMMD9Q9P000 198 aa10.55□□□□□ -0.72
CIITA-210ENST00000575513 A0A0G2JLM5 398 aa10.54□□□□□ -0.72
CIITA-210ENST00000575513 IL6RP08887 468 aaPredicted RBP10.54□□□□□ -0.72
CIITA-210ENST00000575513 IGLL1P15814 213 aa10.54□□□□□ -0.72
CIITA-210ENST00000575513 ECI1P42126 302 aa10.54□□□□□ -0.72
CIITA-210ENST00000575513 RND3P61587 244 aa10.54□□□□□ -0.72
CIITA-210ENST00000575513 ASPHD1Q5U4P2 390 aa10.54□□□□□ -0.72
CIITA-210ENST00000575513 REC114Q7Z4M0 266 aa10.54□□□□□ -0.72
CIITA-210ENST00000575513 VKORC1L1Q8N0U8 176 aa10.54□□□□□ -0.72
CIITA-210ENST00000575513 OR11H1Q8NG94 326 aa10.54□□□□□ -0.72
CIITA-210ENST00000575513 OR51H1Q8NH63 302 aa10.54□□□□□ -0.72
CIITA-210ENST00000575513 ZNF486Q96H40 463 aaPredicted RBP10.54□□□□□ -0.72
CIITA-210ENST00000575513 SDHCQ99643 169 aaPredicted RBP10.54□□□□□ -0.72
CIITA-210ENST00000575513 PRRT1Q99946 306 aa10.54□□□□□ -0.72
CIITA-210ENST00000575513 GNB4Q9HAV0 340 aa10.54□□□□□ -0.72
CIITA-210ENST00000575513 LGALS1P09382 135 aaKnown RBP10.53□□□□□ -0.72
CIITA-210ENST00000575513 OR8U8P0C7N1 319 aa10.53□□□□□ -0.72
CIITA-210ENST00000575513 FAUP35544 74 aaKnown RBP10.53□□□□□ -0.72
CIITA-210ENST00000575513 RPL8P62917 257 aaKnown RBP10.53□□□□□ -0.72
CIITA-210ENST00000575513 ZNF616Q08AN1 781 aa10.53□□□□□ -0.72
CIITA-210ENST00000575513 SURF2Q15527 256 aaPredicted RBP10.53□□□□□ -0.72
CIITA-210ENST00000575513 DEFB136Q30KP8 78 aa10.53□□□□□ -0.72
CIITA-210ENST00000575513 OR4A47Q6IF82 309 aa10.53□□□□□ -0.72
CIITA-210ENST00000575513 SLC25A42Q86VD7 318 aa10.53□□□□□ -0.72
CIITA-210ENST00000575513 C1QL4Q86Z23 238 aa10.53□□□□□ -0.72
CIITA-210ENST00000575513 TOMM5Q8N4H5 51 aa10.53□□□□□ -0.72
CIITA-210ENST00000575513 TTC9CQ8N5M4 171 aa10.53□□□□□ -0.72
CIITA-210ENST00000575513 OR5T1Q8NG75 326 aa10.53□□□□□ -0.72
CIITA-210ENST00000575513 OR1N2Q8NGR9 330 aa10.53□□□□□ -0.72
CIITA-210ENST00000575513 ZFAND1Q8TCF1 268 aa10.53□□□□□ -0.72
CIITA-210ENST00000575513 USMG5Q96IX5 58 aa10.53□□□□□ -0.72
CIITA-210ENST00000575513 PHB2Q99623 299 aa10.53□□□□□ -0.72
CIITA-210ENST00000575513 AKIP1Q9NQ31 210 aa10.53□□□□□ -0.72
CIITA-210ENST00000575513 TNCP24821 2201 aa10.53□□□□□ -0.72
CIITA-210ENST00000575513 WIPF1O43516 503 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms