RNA–Protein interactions for RNA: ENST00000574070.5

CLDN7-207, Transcript of claudin 7, humanhuman

TSL 1 (best)

Gene CLDN7, Length 485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-207ENST00000574070 ERVK-16P61578 105 aa13.5□□□□□ -0.25
CLDN7-207ENST00000574070 C8orf86Q6ZUL3 223 aa13.5□□□□□ -0.25
CLDN7-207ENST00000574070 CCDC190Q86UF4 302 aa13.5□□□□□ -0.25
CLDN7-207ENST00000574070 LHFPL1Q86WI0 220 aa13.5□□□□□ -0.25
CLDN7-207ENST00000574070 ZNF695Q8IW36 515 aa13.5□□□□□ -0.25
CLDN7-207ENST00000574070 Q8N402 240 aa13.5□□□□□ -0.25
CLDN7-207ENST00000574070 MINDY2Q8NBR6 621 aa13.5□□□□□ -0.25
CLDN7-207ENST00000574070 OR5T1Q8NG75 326 aa13.5□□□□□ -0.25
CLDN7-207ENST00000574070 OR4C16Q8NGL9 310 aa13.5□□□□□ -0.25
CLDN7-207ENST00000574070 OR5M8Q8NGP6 311 aa13.5□□□□□ -0.25
CLDN7-207ENST00000574070 OR6Q1Q8NGQ2 317 aa13.5□□□□□ -0.25
CLDN7-207ENST00000574070 TERB2Q8NHR7 220 aa13.5□□□□□ -0.25
CLDN7-207ENST00000574070 CASTOR1Q8WTX7 329 aa13.5□□□□□ -0.25
CLDN7-207ENST00000574070 SRSF12Q8WXF0 261 aaKnown RBP13.5□□□□□ -0.25
CLDN7-207ENST00000574070 MCUBQ9NWR8 336 aa13.5□□□□□ -0.25
CLDN7-207ENST00000574070 V9GYH0 126 aa13.5□□□□□ -0.25
CLDN7-207ENST00000574070 PRKDCP78527 4128 aaKnown RBP13.5□□□□□ -0.25
CLDN7-207ENST00000574070 ANKRD20A5PA0PJZ0 165 aa13.49□□□□□ -0.25
CLDN7-207ENST00000574070 MSGN1A6NI15 193 aa13.49□□□□□ -0.25
CLDN7-207ENST00000574070 PI3P19957 117 aa13.49□□□□□ -0.25
CLDN7-207ENST00000574070 RAB9AP51151 201 aa13.49□□□□□ -0.25
CLDN7-207ENST00000574070 SSBP2P81877 361 aaPredicted RBP13.49□□□□□ -0.25
CLDN7-207ENST00000574070 OR4A47Q6IF82 309 aa13.49□□□□□ -0.25
CLDN7-207ENST00000574070 PUSL1Q8N0Z8 303 aaKnown RBP13.49□□□□□ -0.25
CLDN7-207ENST00000574070 TMEM167AQ8TBQ9 72 aa13.49□□□□□ -0.25
CLDN7-207ENST00000574070 ZFAND1Q8TCF1 268 aa13.49□□□□□ -0.25
CLDN7-207ENST00000574070 ZNF486Q96H40 463 aaPredicted RBP13.49□□□□□ -0.25
CLDN7-207ENST00000574070 MS4A10Q96PG2 267 aa13.49□□□□□ -0.25
CLDN7-207ENST00000574070 KLK15Q9H2R5 256 aa13.49□□□□□ -0.25
CLDN7-207ENST00000574070 PLEKHA2Q9HB19 425 aa13.49□□□□□ -0.25
CLDN7-207ENST00000574070 SLC2A9Q9NRM0 540 aa13.49□□□□□ -0.25
CLDN7-207ENST00000574070 COMMD9Q9P000 198 aa13.49□□□□□ -0.25
CLDN7-207ENST00000574070 COPZ2Q9P299 210 aa13.49□□□□□ -0.25
CLDN7-207ENST00000574070 PLXNB1O43157 2135 aa13.49□□□□□ -0.25
CLDN7-207ENST00000574070 IGLV1-40P01703 118 aa13.48□□□□□ -0.25
CLDN7-207ENST00000574070 ZNF735P0CB33 412 aa13.48□□□□□ -0.25
CLDN7-207ENST00000574070 PTBP1P26599 531 aaKnown RBP eCLIP13.48□□□□□ -0.25
CLDN7-207ENST00000574070 ECI1P42126 302 aa13.48□□□□□ -0.25
CLDN7-207ENST00000574070 PIGPP57054 158 aa13.48□□□□□ -0.25
CLDN7-207ENST00000574070 MRGPRG-AS1Q2M3A8 158 aa13.48□□□□□ -0.25
CLDN7-207ENST00000574070 TOMM5Q8N4H5 51 aa13.48□□□□□ -0.25
CLDN7-207ENST00000574070 RNF152Q8N8N0 203 aa13.48□□□□□ -0.25
CLDN7-207ENST00000574070 CCDC71LQ8N9Z2 235 aa13.48□□□□□ -0.25
CLDN7-207ENST00000574070 OR4A5Q8NH83 315 aa13.48□□□□□ -0.25
CLDN7-207ENST00000574070 MARCH1Q8TCQ1 289 aa13.48□□□□□ -0.25
CLDN7-207ENST00000574070 TMEM68Q96MH6 324 aa13.48□□□□□ -0.25
CLDN7-207ENST00000574070 FYTTD1Q96QD9 318 aaKnown RBP13.48□□□□□ -0.25
CLDN7-207ENST00000574070 PRRT1Q99946 306 aa13.48□□□□□ -0.25
CLDN7-207ENST00000574070 BET1LQ9NYM9 111 aa13.48□□□□□ -0.25
CLDN7-207ENST00000574070 C14orf166Q9Y224 244 aaKnown RBP13.48□□□□□ -0.25
CLDN7-207ENST00000574070 SOX15O60248 233 aa13.47□□□□□ -0.25
CLDN7-207ENST00000574070 CD33P20138 364 aa13.47□□□□□ -0.25
CLDN7-207ENST00000574070 SLC6A1P30531 599 aa13.47□□□□□ -0.25
CLDN7-207ENST00000574070 FAUP35544 74 aaKnown RBP13.47□□□□□ -0.25
CLDN7-207ENST00000574070 RPL27AP46776 148 aaKnown RBP13.47□□□□□ -0.25
CLDN7-207ENST00000574070 CDX1P47902 265 aaPredicted RBP13.47□□□□□ -0.25
CLDN7-207ENST00000574070 INPP1P49441 399 aa13.47□□□□□ -0.25
CLDN7-207ENST00000574070 TPPP2P59282 170 aa13.47□□□□□ -0.25
CLDN7-207ENST00000574070 AP3S2P59780 193 aa13.47□□□□□ -0.25
CLDN7-207ENST00000574070 RPL8P62917 257 aaKnown RBP13.47□□□□□ -0.25
CLDN7-207ENST00000574070 ZNF79Q15937 498 aa13.47□□□□□ -0.25
CLDN7-207ENST00000574070 C19orf54Q5BKX5 351 aa13.47□□□□□ -0.25
CLDN7-207ENST00000574070 C10orf55Q5SWW7 151 aa13.47□□□□□ -0.25
CLDN7-207ENST00000574070 OR51S1Q8NGJ8 323 aa13.47□□□□□ -0.25
CLDN7-207ENST00000574070 OR13C8Q8NGS7 320 aa13.47□□□□□ -0.25
CLDN7-207ENST00000574070 OR5B12Q96R08 314 aa13.47□□□□□ -0.25
CLDN7-207ENST00000574070 TMEM140Q9NV12 185 aa13.47□□□□□ -0.25
CLDN7-207ENST00000574070 COA4Q9NYJ1 87 aa13.47□□□□□ -0.25
CLDN7-207ENST00000574070 SCP2D1Q9UJQ7 156 aa13.47□□□□□ -0.25
CLDN7-207ENST00000574070 VSIG4Q9Y279 399 aa13.47□□□□□ -0.25
CLDN7-207ENST00000574070 KRASP01116 189 aa13.46□□□□□ -0.25
CLDN7-207ENST00000574070 TRGV3P03979 118 aa13.46□□□□□ -0.25
CLDN7-207ENST00000574070 CTSDP07339 412 aaPredicted RBP13.46□□□□□ -0.25
CLDN7-207ENST00000574070 MAS1LP35410 378 aa13.46□□□□□ -0.25
CLDN7-207ENST00000574070 RND3P61587 244 aa13.46□□□□□ -0.25
CLDN7-207ENST00000574070 ZNF57Q68EA5 555 aaPredicted RBP13.46□□□□□ -0.25
CLDN7-207ENST00000574070 ZNF491Q8N8L2 437 aa13.46□□□□□ -0.25
CLDN7-207ENST00000574070 UBE2E2Q96LR5 201 aa13.46□□□□□ -0.25
CLDN7-207ENST00000574070 DUX3Q96PT4 197 aa13.46□□□□□ -0.25
CLDN7-207ENST00000574070 SPIN2AQ99865 258 aa13.46□□□□□ -0.25
CLDN7-207ENST00000574070 SPIN2BQ9BPZ2 258 aa13.46□□□□□ -0.25
CLDN7-207ENST00000574070 SLA2Q9H6Q3 261 aa13.46□□□□□ -0.25
CLDN7-207ENST00000574070 MARCH11A6NNE9 402 aa13.45□□□□□ -0.26
CLDN7-207ENST00000574070 UPK2O00526 184 aa13.45□□□□□ -0.26
CLDN7-207ENST00000574070 SERPINE2P07093 398 aa13.45□□□□□ -0.26
CLDN7-207ENST00000574070 HLA-GP17693 338 aa13.45□□□□□ -0.26
CLDN7-207ENST00000574070 G6PCP35575 357 aa13.45□□□□□ -0.26
CLDN7-207ENST00000574070 MYCNOSP40205 109 aa13.45□□□□□ -0.26
CLDN7-207ENST00000574070 ETV6P41212 452 aa13.45□□□□□ -0.26
CLDN7-207ENST00000574070 RAB25P57735 213 aa13.45□□□□□ -0.26
CLDN7-207ENST00000574070 POU2AF1Q16633 256 aa13.45□□□□□ -0.26
CLDN7-207ENST00000574070 DEFB136Q30KP8 78 aa13.45□□□□□ -0.26
CLDN7-207ENST00000574070 ZNF585BQ52M93 769 aa13.45□□□□□ -0.26
CLDN7-207ENST00000574070 ASPHD1Q5U4P2 390 aa13.45□□□□□ -0.26
CLDN7-207ENST00000574070 TRIQKQ629K1 86 aa13.45□□□□□ -0.26
CLDN7-207ENST00000574070 C4orf3Q8WVX3 66 aa13.45□□□□□ -0.26
CLDN7-207ENST00000574070 GNB4Q9HAV0 340 aa13.45□□□□□ -0.26
CLDN7-207ENST00000574070 TRAV3A0A0B4J244 114 aa13.44□□□□□ -0.26
CLDN7-207ENST00000574070 CCL24O00175 119 aa13.44□□□□□ -0.26
CLDN7-207ENST00000574070 MYOD1P15172 320 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms