RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 HCP5Q6MZN7 132 aa8.38□□□□□ -1.07
SMG6-213ENST00000573166 IL34Q6ZMJ4 242 aa8.38□□□□□ -1.07
SMG6-213ENST00000573166 CLDND2Q8NHS1 167 aa8.38□□□□□ -1.07
SMG6-213ENST00000573166 Q96MF0 132 aa8.38□□□□□ -1.07
SMG6-213ENST00000573166 FBXL15Q9H469 300 aa8.38□□□□□ -1.07
SMG6-213ENST00000573166 SAA2-SAA4A0A096LPE2 208 aa8.37□□□□□ -1.07
SMG6-213ENST00000573166 ZNF320A2RRD8 509 aa8.37□□□□□ -1.07
SMG6-213ENST00000573166 HAX1O00165 279 aa8.37□□□□□ -1.07
SMG6-213ENST00000573166 KBTBD11O94819 623 aa8.37□□□□□ -1.07
SMG6-213ENST00000573166 CD55P08174 381 aa8.37□□□□□ -1.07
SMG6-213ENST00000573166 H2AFB1P0C5Y9 115 aa8.37□□□□□ -1.07
SMG6-213ENST00000573166 SAA2P0DJI9 122 aaPredicted RBP8.37□□□□□ -1.07
SMG6-213ENST00000573166 IGHV1-8P0DP01 117 aa8.37□□□□□ -1.07
SMG6-213ENST00000573166 SLC25A6P12236 298 aa8.37□□□□□ -1.07
SMG6-213ENST00000573166 TAGLN2P37802 199 aaKnown RBP8.37□□□□□ -1.07
SMG6-213ENST00000573166 KIAA0141Q14154 515 aaPredicted RBP8.37□□□□□ -1.07
SMG6-213ENST00000573166 CLRN3Q8NCR9 226 aa8.37□□□□□ -1.07
SMG6-213ENST00000573166 CMTM2Q8TAZ6 248 aa8.37□□□□□ -1.07
SMG6-213ENST00000573166 GPR146Q96CH1 333 aa8.37□□□□□ -1.07
SMG6-213ENST00000573166 C17orf98A8MV24 154 aa8.37□□□□□ -1.07
SMG6-213ENST00000573166 TAS2R45P59539 299 aa8.37□□□□□ -1.07
SMG6-213ENST00000573166 KCNIP4Q6PIL6 250 aa8.37□□□□□ -1.07
SMG6-213ENST00000573166 NRGNQ92686 78 aa8.37□□□□□ -1.07
SMG6-213ENST00000573166 RCC2Q9P258 522 aaKnown RBP8.37□□□□□ -1.07
SMG6-213ENST00000573166 ZMAT5Q9UDW3 170 aaKnown RBP8.37□□□□□ -1.07
SMG6-213ENST00000573166 DSCAMO60469 2012 aa8.37□□□□□ -1.07
SMG6-213ENST00000573166 BCL2L11O43521 198 aa8.37□□□□□ -1.07
SMG6-213ENST00000573166 SPCS3P61009 180 aa8.37□□□□□ -1.07
SMG6-213ENST00000573166 SLC35B1P78383 322 aa8.37□□□□□ -1.07
SMG6-213ENST00000573166 KLRD1Q13241 179 aa8.37□□□□□ -1.07
SMG6-213ENST00000573166 DAZAP2Q15038 168 aaPredicted RBP8.37□□□□□ -1.07
SMG6-213ENST00000573166 C5orf24Q7Z6I8 188 aa8.37□□□□□ -1.07
SMG6-213ENST00000573166 OSR1Q8TAX0 266 aaPredicted RBP8.37□□□□□ -1.07
SMG6-213ENST00000573166 TNRC6BQ9UPQ9 1833 aaKnown RBP8.37□□□□□ -1.07
SMG6-213ENST00000573166 S100A8P05109 93 aa8.37□□□□□ -1.07
SMG6-213ENST00000573166 CFHR2P36980 270 aa8.37□□□□□ -1.07
SMG6-213ENST00000573166 HSPE1P61604 102 aaKnown RBP8.37□□□□□ -1.07
SMG6-213ENST00000573166 CXorf66Q5JRM2 361 aaPredicted RBP8.37□□□□□ -1.07
SMG6-213ENST00000573166 SELENOHQ8IZQ5 122 aaKnown RBP8.37□□□□□ -1.07
SMG6-213ENST00000573166 BTF3L4Q96K17 158 aa8.37□□□□□ -1.07
SMG6-213ENST00000573166 SPOCK3Q9BQ16 436 aa8.37□□□□□ -1.07
SMG6-213ENST00000573166 MYO9AB2RTY4 2548 aa8.36□□□□□ -1.07
SMG6-213ENST00000573166 FXYD3Q14802 87 aa8.36□□□□□ -1.07
SMG6-213ENST00000573166 VMO1Q7Z5L0 202 aa8.36□□□□□ -1.07
SMG6-213ENST00000573166 OR52M1Q8NGK5 317 aa8.36□□□□□ -1.07
SMG6-213ENST00000573166 OR2T6Q8NHC8 308 aa8.36□□□□□ -1.07
SMG6-213ENST00000573166 UHRF2Q96PU4 802 aa8.36□□□□□ -1.07
SMG6-213ENST00000573166 FBXL17Q9UF56 701 aa8.36□□□□□ -1.07
SMG6-213ENST00000573166 POMT1Q9Y6A1 747 aa8.36□□□□□ -1.07
SMG6-213ENST00000573166 NAV3Q8IVL0 2385 aa8.36□□□□□ -1.07
SMG6-213ENST00000573166 IGHV2-26A0A0B4J1V2 119 aa8.36□□□□□ -1.07
SMG6-213ENST00000573166 MBP02144 154 aa8.36□□□□□ -1.07
SMG6-213ENST00000573166 NDUFA6P56556 154 aa8.36□□□□□ -1.07
SMG6-213ENST00000573166 CYB5R2Q6BCY4 276 aa8.36□□□□□ -1.07
SMG6-213ENST00000573166 BRD3OSQ6XYD6 125 aa8.36□□□□□ -1.07
SMG6-213ENST00000573166 C22orf34Q6ZV56 151 aa8.36□□□□□ -1.07
SMG6-213ENST00000573166 PDPNQ86YL7 162 aa8.36□□□□□ -1.07
SMG6-213ENST00000573166 SLC24A4Q8NFF2 622 aa8.36□□□□□ -1.07
SMG6-213ENST00000573166 LHFPL5Q8TAF8 219 aa8.36□□□□□ -1.07
SMG6-213ENST00000573166 RSRP1Q9BUV0 290 aa8.36□□□□□ -1.07
SMG6-213ENST00000573166 ACTR3CQ9C0K3 210 aaPredicted RBP8.36□□□□□ -1.07
SMG6-213ENST00000573166 TIMM8BQ9Y5J9 83 aaPredicted RBP8.36□□□□□ -1.07
SMG6-213ENST00000573166 ARFGEF3Q5TH69 2177 aa8.36□□□□□ -1.07
SMG6-213ENST00000573166 SPEGQ15772 3267 aa8.36□□□□□ -1.07
SMG6-213ENST00000573166 FLNBO75369 2602 aaKnown RBP8.36□□□□□ -1.07
SMG6-213ENST00000573166 C19orf84I3L1E1 186 aa8.36□□□□□ -1.07
SMG6-213ENST00000573166 TMEM187Q14656 261 aa8.36□□□□□ -1.07
SMG6-213ENST00000573166 C1orf147Q96MC9 270 aaPredicted RBP8.36□□□□□ -1.07
SMG6-213ENST00000573166 TMEM147Q9BVK8 224 aa8.36□□□□□ -1.07
SMG6-213ENST00000573166 COL6A3P12111 3177 aa8.35□□□□□ -1.07
SMG6-213ENST00000573166 MT-ND4LP03901 98 aa8.35□□□□□ -1.07
SMG6-213ENST00000573166 MSMBP08118 114 aa8.35□□□□□ -1.07
SMG6-213ENST00000573166 CD37P11049 281 aa8.35□□□□□ -1.07
SMG6-213ENST00000573166 ANOS1P23352 680 aa8.35□□□□□ -1.07
SMG6-213ENST00000573166 ERVK11-1P61568 191 aa8.35□□□□□ -1.07
SMG6-213ENST00000573166 GUCA2BQ16661 112 aa8.35□□□□□ -1.07
SMG6-213ENST00000573166 DUX4L9Q6RFH8 374 aaPredicted RBP8.35□□□□□ -1.07
SMG6-213ENST00000573166 LINC01356Q8N9X3 169 aa8.35□□□□□ -1.07
SMG6-213ENST00000573166 QTRT1Q9BXR0 403 aaKnown RBP8.35□□□□□ -1.07
SMG6-213ENST00000573166 SAMD10Q9BYL1 202 aa8.35□□□□□ -1.07
SMG6-213ENST00000573166 DOK5Q9P104 306 aa8.35□□□□□ -1.07
SMG6-213ENST00000573166 USP34Q70CQ2 3546 aa8.35□□□□□ -1.07
SMG6-213ENST00000573166 MFSD2BA6NFX1 497 aa8.35□□□□□ -1.07
SMG6-213ENST00000573166 P2RY1P47900 373 aa8.35□□□□□ -1.07
SMG6-213ENST00000573166 ATP6V1FQ16864 119 aa8.35□□□□□ -1.07
SMG6-213ENST00000573166 JKAMPQ9P055 326 aa8.35□□□□□ -1.07
SMG6-213ENST00000573166 TCF19Q9Y242 345 aa8.35□□□□□ -1.07
SMG6-213ENST00000573166 URGCP-MRPS24S4R325 110 aa8.35□□□□□ -1.07
SMG6-213ENST00000573166 UMAD1C9J7I0 102 aa8.35□□□□□ -1.07
SMG6-213ENST00000573166 F6UZH7 168 aa8.35□□□□□ -1.07
SMG6-213ENST00000573166 TIMM23O14925 209 aa8.35□□□□□ -1.07
SMG6-213ENST00000573166 MOSP00540 346 aa8.35□□□□□ -1.07
SMG6-213ENST00000573166 ORM2P19652 201 aa8.35□□□□□ -1.07
SMG6-213ENST00000573166 DYNLT3P51808 116 aa8.35□□□□□ -1.07
SMG6-213ENST00000573166 UQCC3Q6UW78 93 aa8.35□□□□□ -1.07
SMG6-213ENST00000573166 TNFRSF14Q92956 283 aa8.35□□□□□ -1.07
SMG6-213ENST00000573166 IL22RA2Q969J5 263 aa8.35□□□□□ -1.07
SMG6-213ENST00000573166 C12orf57Q99622 126 aa8.35□□□□□ -1.07
SMG6-213ENST00000573166 TRAV20A0A0B4J274 112 aa8.34□□□□□ -1.07
SMG6-213ENST00000573166 HMSDA8MTL9 139 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms