RNA–Protein interactions for RNA: ENST00000572665.1

CIITA-208, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-208ENST00000572665 CNBD2Q96M20 576 aa7.1□□□□□ -1.27
CIITA-208ENST00000572665 MS4A10Q96PG2 267 aa7.1□□□□□ -1.27
CIITA-208ENST00000572665 CMSS1Q9BQ75 279 aaKnown RBP7.1□□□□□ -1.27
CIITA-208ENST00000572665 AGMATQ9BSE5 352 aa7.1□□□□□ -1.27
CIITA-208ENST00000572665 NICN1Q9BSH3 213 aa7.1□□□□□ -1.27
CIITA-208ENST00000572665 ALX4Q9H161 411 aaPredicted RBP7.1□□□□□ -1.27
CIITA-208ENST00000572665 Q9H521 79 aa7.1□□□□□ -1.27
CIITA-208ENST00000572665 DUSP21Q9H596 190 aa7.1□□□□□ -1.27
CIITA-208ENST00000572665 AK3Q9UIJ7 227 aa7.1□□□□□ -1.27
CIITA-208ENST00000572665 TPRKBQ9Y3C4 175 aa7.1□□□□□ -1.27
CIITA-208ENST00000572665 IGLV5-39A0A0G2JS06 123 aa7.09□□□□□ -1.27
CIITA-208ENST00000572665 TRDCB7Z8K6 153 aa7.09□□□□□ -1.27
CIITA-208ENST00000572665 USP17L23D6RBM5 183 aa7.09□□□□□ -1.27
CIITA-208ENST00000572665 SOX15O60248 233 aa7.09□□□□□ -1.27
CIITA-208ENST00000572665 CREBL2O60519 120 aaPredicted RBP7.09□□□□□ -1.27
CIITA-208ENST00000572665 PAGE4O60829 102 aa7.09□□□□□ -1.27
CIITA-208ENST00000572665 DIRAS3O95661 229 aa7.09□□□□□ -1.27
CIITA-208ENST00000572665 IGHV3-11P01762 117 aa7.09□□□□□ -1.27
CIITA-208ENST00000572665 HOXB5P09067 269 aa7.09□□□□□ -1.27
CIITA-208ENST00000572665 CD3GP09693 182 aa7.09□□□□□ -1.27
CIITA-208ENST00000572665 RRASP10301 218 aa7.09□□□□□ -1.27
CIITA-208ENST00000572665 CD37P11049 281 aa7.09□□□□□ -1.27
CIITA-208ENST00000572665 GADD45AP24522 165 aa7.09□□□□□ -1.27
CIITA-208ENST00000572665 NDPQ00604 133 aa7.09□□□□□ -1.27
CIITA-208ENST00000572665 P2RY14Q15391 338 aa7.09□□□□□ -1.27
CIITA-208ENST00000572665 RAB11BQ15907 218 aa7.09□□□□□ -1.27
CIITA-208ENST00000572665 RTL8BQ17RB0 113 aa7.09□□□□□ -1.27
CIITA-208ENST00000572665 CASC10Q5T4H9 136 aa7.09□□□□□ -1.27
CIITA-208ENST00000572665 GTSCR1Q86UQ5 136 aa7.09□□□□□ -1.27
CIITA-208ENST00000572665 FAM89BQ8N5H3 189 aa7.09□□□□□ -1.27
CIITA-208ENST00000572665 POC5Q8NA72 575 aa7.09□□□□□ -1.27
CIITA-208ENST00000572665 TMEM116Q8NCL8 245 aa7.09□□□□□ -1.27
CIITA-208ENST00000572665 OR4A4PQ8NGN8 299 aa7.09□□□□□ -1.27
CIITA-208ENST00000572665 OR10J5Q8NHC4 309 aa7.09□□□□□ -1.27
CIITA-208ENST00000572665 GRPEL2Q8TAA5 225 aa7.09□□□□□ -1.27
CIITA-208ENST00000572665 SNAPC3Q92966 411 aa7.09□□□□□ -1.27
CIITA-208ENST00000572665 USMG5Q96IX5 58 aa7.09□□□□□ -1.27
CIITA-208ENST00000572665 CLCC1Q96S66 551 aa7.09□□□□□ -1.27
CIITA-208ENST00000572665 FAM103A1Q9BTL3 118 aaKnown RBP7.09□□□□□ -1.27
CIITA-208ENST00000572665 LPAR5Q9H1C0 372 aa7.09□□□□□ -1.27
CIITA-208ENST00000572665 Q9N2K0 584 aa7.09□□□□□ -1.27
CIITA-208ENST00000572665 SLC35D1Q9NTN3 355 aa7.09□□□□□ -1.27
CIITA-208ENST00000572665 GAB2Q9UQC2 676 aa7.09□□□□□ -1.27
CIITA-208ENST00000572665 FBXO7Q9Y3I1 522 aa7.09□□□□□ -1.27
CIITA-208ENST00000572665 RBM7Q9Y580 266 aaKnown RBP7.09□□□□□ -1.27
CIITA-208ENST00000572665 A0A0B4J203 849 aa7.08□□□□□ -1.28
CIITA-208ENST00000572665 A8MZ25 164 aa7.08□□□□□ -1.28
CIITA-208ENST00000572665 M0R1X1 148 aa7.08□□□□□ -1.28
CIITA-208ENST00000572665 FCN1O00602 326 aa7.08□□□□□ -1.28
CIITA-208ENST00000572665 SOCS1O15524 211 aa7.08□□□□□ -1.28
CIITA-208ENST00000572665 BRI3O95415 125 aa7.08□□□□□ -1.28
CIITA-208ENST00000572665 IGLV1-51P01701 117 aa7.08□□□□□ -1.28
CIITA-208ENST00000572665 IFNA6P05013 189 aa7.08□□□□□ -1.28
CIITA-208ENST00000572665 SCTP09683 121 aa7.08□□□□□ -1.28
CIITA-208ENST00000572665 HSMCR30P0CW71 290 aa7.08□□□□□ -1.28
CIITA-208ENST00000572665 VEGFCP49767 419 aa7.08□□□□□ -1.28
CIITA-208ENST00000572665 QRFPP83859 136 aa7.08□□□□□ -1.28
CIITA-208ENST00000572665 IRF3Q14653 427 aa7.08□□□□□ -1.28
CIITA-208ENST00000572665 ARL6IP1Q15041 203 aa7.08□□□□□ -1.28
CIITA-208ENST00000572665 ODF3L2Q3SX64 289 aa7.08□□□□□ -1.28
CIITA-208ENST00000572665 LIPKQ5VXJ0 399 aa7.08□□□□□ -1.28
CIITA-208ENST00000572665 LCN12Q6JVE5 192 aa7.08□□□□□ -1.28
CIITA-208ENST00000572665 NOXA1Q86UR1 476 aa7.08□□□□□ -1.28
CIITA-208ENST00000572665 CASTOR1Q8WTX7 329 aa7.08□□□□□ -1.28
CIITA-208ENST00000572665 ISOC1Q96CN7 298 aa7.08□□□□□ -1.28
CIITA-208ENST00000572665 ADTRPQ96IZ2 230 aa7.08□□□□□ -1.28
CIITA-208ENST00000572665 HARBI1Q96MB7 349 aa7.08□□□□□ -1.28
CIITA-208ENST00000572665 PHB2Q99623 299 aa7.08□□□□□ -1.28
CIITA-208ENST00000572665 RDH8Q9NYR8 311 aa7.08□□□□□ -1.28
CIITA-208ENST00000572665 OR1A1Q9P1Q5 309 aa7.08□□□□□ -1.28
CIITA-208ENST00000572665 LSM2Q9Y333 95 aaKnown RBP7.08□□□□□ -1.28
CIITA-208ENST00000572665 TENM3Q9P273 2699 aa7.07□□□□□ -1.28
CIITA-208ENST00000572665 METTL21EPA6NDL7 271 aa7.07□□□□□ -1.28
CIITA-208ENST00000572665 PDCD5O14737 125 aa7.07□□□□□ -1.28
CIITA-208ENST00000572665 AIREO43918 545 aa7.07□□□□□ -1.28
CIITA-208ENST00000572665 IGKV1-16P04430 117 aa7.07□□□□□ -1.28
CIITA-208ENST00000572665 GABARAPL2P60520 117 aa7.07□□□□□ -1.28
CIITA-208ENST00000572665 MLLT11Q13015 90 aaPredicted RBP7.07□□□□□ -1.28
CIITA-208ENST00000572665 INSL4Q14641 139 aa7.07□□□□□ -1.28
CIITA-208ENST00000572665 VMA21Q3ZAQ7 101 aa7.07□□□□□ -1.28
CIITA-208ENST00000572665 PRSS48Q7RTY5 328 aa7.07□□□□□ -1.28
CIITA-208ENST00000572665 C5orf24Q7Z6I8 188 aa7.07□□□□□ -1.28
CIITA-208ENST00000572665 NRACQ8N912 160 aa7.07□□□□□ -1.28
CIITA-208ENST00000572665 ZNF383Q8NA42 475 aa7.07□□□□□ -1.28
CIITA-208ENST00000572665 DRAXINQ8NBI3 349 aaPredicted RBP7.07□□□□□ -1.28
CIITA-208ENST00000572665 OR9G4Q8NGQ1 327 aa7.07□□□□□ -1.28
CIITA-208ENST00000572665 TMEM203Q969S6 136 aa7.07□□□□□ -1.28
CIITA-208ENST00000572665 FAM3DQ96BQ1 224 aa7.07□□□□□ -1.28
CIITA-208ENST00000572665 RAB3CQ96E17 227 aa7.07□□□□□ -1.28
CIITA-208ENST00000572665 RBMXL1Q96E39 390 aaKnown RBP7.07□□□□□ -1.28
CIITA-208ENST00000572665 ARHGAP5-AS1Q96IT6 56 aa7.07□□□□□ -1.28
CIITA-208ENST00000572665 TM2D3Q9BRN9 247 aa7.07□□□□□ -1.28
CIITA-208ENST00000572665 GINS4Q9BRT9 223 aa7.07□□□□□ -1.28
CIITA-208ENST00000572665 PECRQ9BY49 303 aa7.07□□□□□ -1.28
CIITA-208ENST00000572665 OR2D2Q9H210 308 aa7.07□□□□□ -1.28
CIITA-208ENST00000572665 ACOT13Q9NPJ3 140 aa7.07□□□□□ -1.28
CIITA-208ENST00000572665 PEF1Q9UBV8 284 aaKnown RBP7.07□□□□□ -1.28
CIITA-208ENST00000572665 RAB22AQ9UL26 194 aa7.07□□□□□ -1.28
CIITA-208ENST00000572665 BLOC1S6Q9UL45 172 aa7.07□□□□□ -1.28
CIITA-208ENST00000572665 AK6Q9Y3D8 172 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms