RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 TNFSF12O43508 249 aa13.7□□□□□ -0.22
CHD3-214ENST00000572579 KBTBD11O94819 623 aa13.7□□□□□ -0.22
CHD3-214ENST00000572579 NDUFB8O95169 186 aa13.7□□□□□ -0.22
CHD3-214ENST00000572579 AREGP15514 252 aa13.7□□□□□ -0.22
CHD3-214ENST00000572579 FCGR2CP31995 323 aa13.7□□□□□ -0.22
CHD3-214ENST00000572579 C15orf32Q32M92 178 aa13.7□□□□□ -0.22
CHD3-214ENST00000572579 IDNKQ5T6J7 187 aa13.7□□□□□ -0.22
CHD3-214ENST00000572579 HOGA1Q86XE5 327 aa13.7□□□□□ -0.22
CHD3-214ENST00000572579 NECAP1Q8NC96 275 aa13.7□□□□□ -0.22
CHD3-214ENST00000572579 TCTEX1D2Q8WW35 142 aa13.7□□□□□ -0.22
CHD3-214ENST00000572579 HSD17B10Q99714 261 aaKnown RBP13.7□□□□□ -0.22
CHD3-214ENST00000572579 ZMAT4Q9H898 229 aa13.7□□□□□ -0.22
CHD3-214ENST00000572579 LOC100506127A0A0U1RQW1 187 aa13.69□□□□□ -0.22
CHD3-214ENST00000572579 SLC22A5O76082 557 aa13.69□□□□□ -0.22
CHD3-214ENST00000572579 IGHV3-23P01764 117 aa13.69□□□□□ -0.22
CHD3-214ENST00000572579 ZNF735P0CB33 412 aa13.69□□□□□ -0.22
CHD3-214ENST00000572579 CD36P16671 472 aa13.69□□□□□ -0.22
CHD3-214ENST00000572579 KLK9Q2XQG4 91 aa13.69□□□□□ -0.22
CHD3-214ENST00000572579 CD300EQ496F6 205 aaPredicted RBP13.69□□□□□ -0.22
CHD3-214ENST00000572579 LINC00322Q6ZN03 302 aaPredicted RBP13.69□□□□□ -0.22
CHD3-214ENST00000572579 BEST4Q8NFU0 473 aa13.69□□□□□ -0.22
CHD3-214ENST00000572579 OR4S2Q8NH73 311 aa13.69□□□□□ -0.22
CHD3-214ENST00000572579 AUNIPQ9H7T9 357 aa13.69□□□□□ -0.22
CHD3-214ENST00000572579 SLC2A9Q9NRM0 540 aa13.69□□□□□ -0.22
CHD3-214ENST00000572579 KLK9Q9UKQ9 250 aa13.69□□□□□ -0.22
CHD3-214ENST00000572579 S4R3C0 116 aa13.69□□□□□ -0.22
CHD3-214ENST00000572579 TRAV3A0A0B4J244 114 aa13.68□□□□□ -0.22
CHD3-214ENST00000572579 NPIPB5A8MRT5 1133 aa13.68□□□□□ -0.22
CHD3-214ENST00000572579 SCGNO76038 276 aa13.68□□□□□ -0.22
CHD3-214ENST00000572579 ACTL6BO94805 426 aa13.68□□□□□ -0.22
CHD3-214ENST00000572579 OR2C1O95371 312 aa13.68□□□□□ -0.22
CHD3-214ENST00000572579 CRYGCP07315 174 aa13.68□□□□□ -0.22
CHD3-214ENST00000572579 NEDD8Q15843 81 aa13.68□□□□□ -0.22
CHD3-214ENST00000572579 ZNF66Q6ZN08 573 aa13.68□□□□□ -0.22
CHD3-214ENST00000572579 SSX9Q7RTT3 188 aa13.68□□□□□ -0.22
CHD3-214ENST00000572579 SGPP2Q8IWX5 399 aa13.68□□□□□ -0.22
CHD3-214ENST00000572579 SECTM1Q8WVN6 248 aa13.68□□□□□ -0.22
CHD3-214ENST00000572579 CCDC140Q96MF4 163 aa13.68□□□□□ -0.22
CHD3-214ENST00000572579 FYTTD1Q96QD9 318 aaKnown RBP13.68□□□□□ -0.22
CHD3-214ENST00000572579 MRPS7Q9Y2R9 242 aaKnown RBP13.68□□□□□ -0.22
CHD3-214ENST00000572579 SELENOKQ9Y6D0 94 aa13.68□□□□□ -0.22
CHD3-214ENST00000572579 EPPK1P58107 5090 aaKnown RBP13.68□□□□□ -0.22
CHD3-214ENST00000572579 RPL27AP46776 148 aaKnown RBP13.67□□□□□ -0.22
CHD3-214ENST00000572579 TATDN3Q17R31 274 aa13.67□□□□□ -0.22
CHD3-214ENST00000572579 DEFB114Q30KQ6 69 aa13.67□□□□□ -0.22
CHD3-214ENST00000572579 Q8N402 240 aa13.67□□□□□ -0.22
CHD3-214ENST00000572579 OR13F1Q8NGS4 319 aa13.67□□□□□ -0.22
CHD3-214ENST00000572579 FBXL7Q9UJT9 491 aa13.67□□□□□ -0.22
CHD3-214ENST00000572579 ZNF257Q9Y2Q1 563 aa13.67□□□□□ -0.22
CHD3-214ENST00000572579 ETV7Q9Y603 341 aa13.67□□□□□ -0.22
CHD3-214ENST00000572579 PLECQ15149 4684 aaKnown RBP13.66□□□□□ -0.22
CHD3-214ENST00000572579 C2orf70A6NJV1 201 aa13.66□□□□□ -0.22
CHD3-214ENST00000572579 PPYP01298 95 aa13.66□□□□□ -0.22
CHD3-214ENST00000572579 REG1AP05451 166 aa13.66□□□□□ -0.22
CHD3-214ENST00000572579 CD7P09564 240 aa13.66□□□□□ -0.22
CHD3-214ENST00000572579 LYL1P12980 280 aa13.66□□□□□ -0.22
CHD3-214ENST00000572579 CTRB1P17538 263 aa13.66□□□□□ -0.22
CHD3-214ENST00000572579 PSMB6P28072 239 aa13.66□□□□□ -0.22
CHD3-214ENST00000572579 SCAND1P57086 179 aa13.66□□□□□ -0.22
CHD3-214ENST00000572579 ZFAND6Q6FIF0 208 aa13.66□□□□□ -0.22
CHD3-214ENST00000572579 CTRB2Q6GPI1 263 aa13.66□□□□□ -0.22
CHD3-214ENST00000572579 OR4A47Q6IF82 309 aa13.66□□□□□ -0.22
CHD3-214ENST00000572579 LCN12Q6JVE5 192 aa13.66□□□□□ -0.22
CHD3-214ENST00000572579 Q9H521 79 aa13.66□□□□□ -0.22
CHD3-214ENST00000572579 RETNQ9HD89 108 aa13.66□□□□□ -0.22
CHD3-214ENST00000572579 RBMY1BA6NDE4 496 aaKnown RBP13.65□□□□□ -0.22
CHD3-214ENST00000572579 MEIS3P1A6NDR6 274 aa13.65□□□□□ -0.22
CHD3-214ENST00000572579 RBMY1EA6NEQ0 496 aaKnown RBP13.65□□□□□ -0.22
CHD3-214ENST00000572579 SULT1C2O00338 296 aa13.65□□□□□ -0.22
CHD3-214ENST00000572579 CREBL2O60519 120 aaPredicted RBP13.65□□□□□ -0.22
CHD3-214ENST00000572579 RBMY1DP0C7P1 496 aaKnown RBP13.65□□□□□ -0.22
CHD3-214ENST00000572579 FOLR2P14207 255 aa13.65□□□□□ -0.22
CHD3-214ENST00000572579 KIR2DS2P43631 304 aa13.65□□□□□ -0.22
CHD3-214ENST00000572579 MSMO1Q15800 293 aa13.65□□□□□ -0.22
CHD3-214ENST00000572579 ZNF818PQ6ZRF7 136 aa13.65□□□□□ -0.22
CHD3-214ENST00000572579 SPAG16Q8N0X2 631 aa13.65□□□□□ -0.22
CHD3-214ENST00000572579 VSTM2AQ8TAG5 236 aa13.65□□□□□ -0.22
CHD3-214ENST00000572579 WFDC10AQ9H1F0 79 aa13.65□□□□□ -0.22
CHD3-214ENST00000572579 PEMTQ9UBM1 199 aa13.65□□□□□ -0.22
CHD3-214ENST00000572579 A0A0A6YYH2 397 aa13.64□□□□□ -0.23
CHD3-214ENST00000572579 A6NJ64 397 aa13.64□□□□□ -0.23
CHD3-214ENST00000572579 AIREO43918 545 aa13.64□□□□□ -0.23
CHD3-214ENST00000572579 HLA-GP17693 338 aa13.64□□□□□ -0.23
CHD3-214ENST00000572579 MAS1LP35410 378 aa13.64□□□□□ -0.23
CHD3-214ENST00000572579 OR2B8PP59922 312 aa13.64□□□□□ -0.23
CHD3-214ENST00000572579 ARPC4P59998 168 aa13.64□□□□□ -0.23
CHD3-214ENST00000572579 RPL8P62917 257 aaKnown RBP13.64□□□□□ -0.23
CHD3-214ENST00000572579 TIMM50Q3ZCQ8 353 aa13.64□□□□□ -0.23
CHD3-214ENST00000572579 CLEC19AQ6UXS0 136 aa13.64□□□□□ -0.23
CHD3-214ENST00000572579 SLC25A42Q86VD7 318 aa13.64□□□□□ -0.23
CHD3-214ENST00000572579 GIMAP1Q8WWP7 306 aa13.64□□□□□ -0.23
CHD3-214ENST00000572579 CACNG8Q8WXS5 425 aa13.64□□□□□ -0.23
CHD3-214ENST00000572579 KCTD12Q96CX2 325 aaKnown RBP13.64□□□□□ -0.23
CHD3-214ENST00000572579 SLC5A7Q9GZV3 580 aa13.64□□□□□ -0.23
CHD3-214ENST00000572579 PLEKHA3Q9HB20 300 aa13.64□□□□□ -0.23
CHD3-214ENST00000572579 BET1LQ9NYM9 111 aa13.64□□□□□ -0.23
CHD3-214ENST00000572579 IGLV11-55A0A075B6I3 123 aa13.63□□□□□ -0.23
CHD3-214ENST00000572579 MFSD2BA6NFX1 497 aa13.63□□□□□ -0.23
CHD3-214ENST00000572579 LGALS9O00182 355 aa13.63□□□□□ -0.23
CHD3-214ENST00000572579 GGCTO75223 188 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms