RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 FABP5Q01469 135 aa14.21□□□□□ -0.13
NUP88-203ENST00000572019 OR10R2Q8NGX6 335 aa14.21□□□□□ -0.13
NUP88-203ENST00000572019 UFD1Q92890 307 aa14.21□□□□□ -0.13
NUP88-203ENST00000572019 OR51E2Q9H255 320 aa14.21□□□□□ -0.13
NUP88-203ENST00000572019 SLC2A9Q9NRM0 540 aa14.21□□□□□ -0.13
NUP88-203ENST00000572019 KBTBD11O94819 623 aa14.2□□□□□ -0.14
NUP88-203ENST00000572019 CRYGCP07315 174 aa14.2□□□□□ -0.14
NUP88-203ENST00000572019 C8orf88P0DMB2 117 aa14.2□□□□□ -0.14
NUP88-203ENST00000572019 HIST1H1DP16402 221 aaKnown RBP14.2□□□□□ -0.14
NUP88-203ENST00000572019 NFYAP23511 347 aaPredicted RBP14.2□□□□□ -0.14
NUP88-203ENST00000572019 RPL27AP46776 148 aaKnown RBP14.2□□□□□ -0.14
NUP88-203ENST00000572019 MRPS15P82914 257 aaKnown RBP14.2□□□□□ -0.14
NUP88-203ENST00000572019 EIF4EBP1Q13541 118 aaPredicted RBP14.2□□□□□ -0.14
NUP88-203ENST00000572019 ZNF585BQ52M93 769 aa14.2□□□□□ -0.14
NUP88-203ENST00000572019 FAM209BQ5JX69 171 aa14.2□□□□□ -0.14
NUP88-203ENST00000572019 KCTD9Q7L273 389 aa14.2□□□□□ -0.14
NUP88-203ENST00000572019 SLC25A42Q86VD7 318 aa14.2□□□□□ -0.14
NUP88-203ENST00000572019 PUSL1Q8N0Z8 303 aaKnown RBP14.2□□□□□ -0.14
NUP88-203ENST00000572019 RAB22AQ9UL26 194 aa14.2□□□□□ -0.14
NUP88-203ENST00000572019 RBMX2Q9Y388 322 aaKnown RBP14.2□□□□□ -0.14
NUP88-203ENST00000572019 V9GY05 133 aa14.2□□□□□ -0.14
NUP88-203ENST00000572019 HSMCR30P0CW71 290 aa14.19□□□□□ -0.14
NUP88-203ENST00000572019 CTRB1P17538 263 aa14.19□□□□□ -0.14
NUP88-203ENST00000572019 PSMB6P28072 239 aa14.19□□□□□ -0.14
NUP88-203ENST00000572019 BMI1P35226 326 aa14.19□□□□□ -0.14
NUP88-203ENST00000572019 PRR20EP86478 221 aa14.19□□□□□ -0.14
NUP88-203ENST00000572019 PRR20CP86479 221 aa14.19□□□□□ -0.14
NUP88-203ENST00000572019 PRR20DP86480 221 aa14.19□□□□□ -0.14
NUP88-203ENST00000572019 PRR20BP86481 221 aa14.19□□□□□ -0.14
NUP88-203ENST00000572019 PRR20AP86496 221 aa14.19□□□□□ -0.14
NUP88-203ENST00000572019 CTRB2Q6GPI1 263 aa14.19□□□□□ -0.14
NUP88-203ENST00000572019 Q6ZWC4 215 aa14.19□□□□□ -0.14
NUP88-203ENST00000572019 ZNF645Q8N7E2 425 aa14.19□□□□□ -0.14
NUP88-203ENST00000572019 OR1L6Q8NGR2 347 aa14.19□□□□□ -0.14
NUP88-203ENST00000572019 TMEM167AQ8TBQ9 72 aa14.19□□□□□ -0.14
NUP88-203ENST00000572019 TP53TG1Q9Y2A0 90 aa14.19□□□□□ -0.14
NUP88-203ENST00000572019 IGLV11-55A0A075B6I3 123 aa14.18□□□□□ -0.14
NUP88-203ENST00000572019 CREBL2O60519 120 aaPredicted RBP14.18□□□□□ -0.14
NUP88-203ENST00000572019 CLEC3BP05452 202 aa14.18□□□□□ -0.14
NUP88-203ENST00000572019 KLK9Q2XQG4 91 aa14.18□□□□□ -0.14
NUP88-203ENST00000572019 ODF3L2Q3SX64 289 aa14.18□□□□□ -0.14
NUP88-203ENST00000572019 FAM106AQ4KMX7 169 aa14.18□□□□□ -0.14
NUP88-203ENST00000572019 PHLDA1Q8WV24 401 aaPredicted RBP14.18□□□□□ -0.14
NUP88-203ENST00000572019 EEF1AKMT3Q96AZ1 226 aa14.18□□□□□ -0.14
NUP88-203ENST00000572019 OR2A7Q96R45 310 aa14.18□□□□□ -0.14
NUP88-203ENST00000572019 KLK9Q9UKQ9 250 aa14.18□□□□□ -0.14
NUP88-203ENST00000572019 DPPA5A6NC42 116 aa14.17□□□□□ -0.14
NUP88-203ENST00000572019 RPL35AP18077 110 aaKnown RBP14.17□□□□□ -0.14
NUP88-203ENST00000572019 FCGR2BP31994 310 aaPredicted RBP14.17□□□□□ -0.14
NUP88-203ENST00000572019 GPR183P32249 361 aa14.17□□□□□ -0.14
NUP88-203ENST00000572019 RCN1Q15293 331 aa14.17□□□□□ -0.14
NUP88-203ENST00000572019 ANKRD55Q3KP44 614 aa14.17□□□□□ -0.14
NUP88-203ENST00000572019 Q6ZS49 121 aa14.17□□□□□ -0.14
NUP88-203ENST00000572019 SSX9Q7RTT3 188 aa14.17□□□□□ -0.14
NUP88-203ENST00000572019 RNF183Q96D59 192 aa14.17□□□□□ -0.14
NUP88-203ENST00000572019 KLK5Q9Y337 293 aaPredicted RBP14.17□□□□□ -0.14
NUP88-203ENST00000572019 DNAH6Q9C0G6 4158 aa14.16□□□□□ -0.14
NUP88-203ENST00000572019 ARL6IP5O75915 188 aa14.16□□□□□ -0.14
NUP88-203ENST00000572019 HLA-DQB1P01920 261 aa14.16□□□□□ -0.14
NUP88-203ENST00000572019 ARFRP1Q13795 201 aa14.16□□□□□ -0.14
NUP88-203ENST00000572019 OGFRL1Q5TC84 451 aaPredicted RBP14.16□□□□□ -0.14
NUP88-203ENST00000572019 LGALS9CQ6DKI2 356 aa14.16□□□□□ -0.14
NUP88-203ENST00000572019 RBPMS2Q6ZRY4 209 aaKnown RBP14.16□□□□□ -0.14
NUP88-203ENST00000572019 OR2C3Q8N628 320 aa14.16□□□□□ -0.14
NUP88-203ENST00000572019 C8orf4Q9NR00 106 aa14.16□□□□□ -0.14
NUP88-203ENST00000572019 SPATA2Q9UM82 520 aa14.16□□□□□ -0.14
NUP88-203ENST00000572019 OR2W1Q9Y3N9 320 aa14.16□□□□□ -0.14
NUP88-203ENST00000572019 TRAV25A0A0B4J276 109 aa14.15□□□□□ -0.14
NUP88-203ENST00000572019 CRHBPP24387 322 aa14.15□□□□□ -0.14
NUP88-203ENST00000572019 APOC4P55056 127 aa14.15□□□□□ -0.14
NUP88-203ENST00000572019 ZNF124Q15973 351 aa14.15□□□□□ -0.14
NUP88-203ENST00000572019 OR4A47Q6IF82 309 aa14.15□□□□□ -0.14
NUP88-203ENST00000572019 NR2C2APQ86WQ0 139 aa14.15□□□□□ -0.14
NUP88-203ENST00000572019 ZNF502Q8TBZ5 544 aa14.15□□□□□ -0.14
NUP88-203ENST00000572019 TCTEX1D2Q8WW35 142 aa14.15□□□□□ -0.14
NUP88-203ENST00000572019 TAS2R8Q9NYW2 309 aa14.15□□□□□ -0.14
NUP88-203ENST00000572019 PRELID3BQ9Y3B1 194 aa14.15□□□□□ -0.14
NUP88-203ENST00000572019 IGHV3OR16-8A0A075B7F1 116 aa14.14□□□□□ -0.15
NUP88-203ENST00000572019 TRAV3A0A0B4J244 114 aa14.14□□□□□ -0.15
NUP88-203ENST00000572019 RPA2P15927 270 aa14.14□□□□□ -0.15
NUP88-203ENST00000572019 ATF4P18848 351 aaPredicted RBP14.14□□□□□ -0.15
NUP88-203ENST00000572019 OR4S2Q8NH73 311 aa14.14□□□□□ -0.15
NUP88-203ENST00000572019 C5orf66Q9H5L9 145 aa14.14□□□□□ -0.15
NUP88-203ENST00000572019 MRPL27Q9P0M9 148 aaKnown RBP14.14□□□□□ -0.15
NUP88-203ENST00000572019 MRPS7Q9Y2R9 242 aaKnown RBP14.14□□□□□ -0.15
NUP88-203ENST00000572019 IGLC7A0M8Q6 106 aa14.13□□□□□ -0.15
NUP88-203ENST00000572019 GADD45AP24522 165 aa14.13□□□□□ -0.15
NUP88-203ENST00000572019 TALDO1P37837 337 aa14.13□□□□□ -0.15
NUP88-203ENST00000572019 MAP2K4P45985 399 aa14.13□□□□□ -0.15
NUP88-203ENST00000572019 PSMD7P51665 324 aa14.13□□□□□ -0.15
NUP88-203ENST00000572019 SPAG8Q99932 426 aaPredicted RBP14.13□□□□□ -0.15
NUP88-203ENST00000572019 ZNF436Q9C0F3 470 aaPredicted RBP14.13□□□□□ -0.15
NUP88-203ENST00000572019 TRBV7-1A0A0A6YYK4 115 aa14.12□□□□□ -0.15
NUP88-203ENST00000572019 SMIM30A4D0T7 59 aa14.12□□□□□ -0.15
NUP88-203ENST00000572019 IFITM5A6NNB3 132 aa14.12□□□□□ -0.15
NUP88-203ENST00000572019 DEFA4P12838 97 aa14.12□□□□□ -0.15
NUP88-203ENST00000572019 CD36P16671 472 aa14.12□□□□□ -0.15
NUP88-203ENST00000572019 HLA-GP17693 338 aa14.12□□□□□ -0.15
NUP88-203ENST00000572019 RAB6AP20340 208 aa14.12□□□□□ -0.15
NUP88-203ENST00000572019 MAS1LP35410 378 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms