RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 WDR61Q9GZS3 305 aaKnown RBP13.5□□□□□ -0.25
RAB40B-206ENST00000571995 RAXQ9Y2V3 346 aa13.5□□□□□ -0.25
RAB40B-206ENST00000571995 TRAV20A0A0B4J274 112 aa13.49□□□□□ -0.25
RAB40B-206ENST00000571995 COLCA2A8K830 154 aa13.49□□□□□ -0.25
RAB40B-206ENST00000571995 PPP5D1E7EU14 171 aa13.49□□□□□ -0.25
RAB40B-206ENST00000571995 DAZAP2Q15038 168 aaPredicted RBP13.49□□□□□ -0.25
RAB40B-206ENST00000571995 COMMD1Q8N668 190 aa13.49□□□□□ -0.25
RAB40B-206ENST00000571995 PIGBOS1A0A0B4J2F0 54 aa13.49□□□□□ -0.25
RAB40B-206ENST00000571995 IGHV3-35A0A0C4DH35 117 aa13.49□□□□□ -0.25
RAB40B-206ENST00000571995 ZNF320A2RRD8 509 aa13.49□□□□□ -0.25
RAB40B-206ENST00000571995 LYL1P12980 280 aa13.49□□□□□ -0.25
RAB40B-206ENST00000571995 TMEM241Q24JQ0 296 aa13.49□□□□□ -0.25
RAB40B-206ENST00000571995 ZNF66Q6ZN08 573 aa13.49□□□□□ -0.25
RAB40B-206ENST00000571995 NHLRC2Q8NBF2 726 aa13.49□□□□□ -0.25
RAB40B-206ENST00000571995 hADV38S2A0JD32 116 aa13.49□□□□□ -0.25
RAB40B-206ENST00000571995 C1QTNF9BB2RNN3 333 aa13.49□□□□□ -0.25
RAB40B-206ENST00000571995 LY86O95711 162 aa13.49□□□□□ -0.25
RAB40B-206ENST00000571995 B2MP61769 119 aa13.49□□□□□ -0.25
RAB40B-206ENST00000571995 MLANAQ16655 118 aa13.49□□□□□ -0.25
RAB40B-206ENST00000571995 C10orf55Q5SWW7 151 aa13.49□□□□□ -0.25
RAB40B-206ENST00000571995 OR10A7Q8NGE5 316 aa13.49□□□□□ -0.25
RAB40B-206ENST00000571995 MALSU1Q96EH3 234 aa13.49□□□□□ -0.25
RAB40B-206ENST00000571995 IGKV1D-17A0A075B6S4 117 aa13.48□□□□□ -0.25
RAB40B-206ENST00000571995 RRHO14718 337 aa13.48□□□□□ -0.25
RAB40B-206ENST00000571995 TNFSF13O75888 250 aa13.48□□□□□ -0.25
RAB40B-206ENST00000571995 GLRXP35754 106 aa13.48□□□□□ -0.25
RAB40B-206ENST00000571995 MSMPQ1L6U9 139 aa13.48□□□□□ -0.25
RAB40B-206ENST00000571995 TMEM41BQ5BJD5 291 aa13.48□□□□□ -0.25
RAB40B-206ENST00000571995 C22orf34Q6ZV56 151 aa13.48□□□□□ -0.25
RAB40B-206ENST00000571995 ASCL5Q7RTU5 278 aa13.48□□□□□ -0.25
RAB40B-206ENST00000571995 LINC00518Q8N0U6 118 aa13.48□□□□□ -0.25
RAB40B-206ENST00000571995 OR4S2Q8NH73 311 aa13.48□□□□□ -0.25
RAB40B-206ENST00000571995 SLC25A17O43808 307 aa13.48□□□□□ -0.25
RAB40B-206ENST00000571995 HABP2Q14520 560 aaPredicted RBP13.48□□□□□ -0.25
RAB40B-206ENST00000571995 SSX2Q16385 188 aa13.48□□□□□ -0.25
RAB40B-206ENST00000571995 GPR61Q9BZJ8 451 aa13.48□□□□□ -0.25
RAB40B-206ENST00000571995 CISD1Q9NZ45 108 aaKnown RBP13.48□□□□□ -0.25
RAB40B-206ENST00000571995 COL4A2P08572 1712 aa13.48□□□□□ -0.25
RAB40B-206ENST00000571995 NPY1RP25929 384 aa13.48□□□□□ -0.25
RAB40B-206ENST00000571995 LY6DQ14210 128 aa13.48□□□□□ -0.25
RAB40B-206ENST00000571995 BSXQ3C1V8 233 aa13.48□□□□□ -0.25
RAB40B-206ENST00000571995 TIMM23BQ5SRD1 257 aa13.48□□□□□ -0.25
RAB40B-206ENST00000571995 SSX7Q7RTT5 188 aa13.48□□□□□ -0.25
RAB40B-206ENST00000571995 RPP25LQ8N5L8 163 aaKnown RBP13.48□□□□□ -0.25
RAB40B-206ENST00000571995 PPIAL4EA0A075B759 164 aa13.47□□□□□ -0.25
RAB40B-206ENST00000571995 MDFIC2A0A1B0GVS7 189 aa13.47□□□□□ -0.25
RAB40B-206ENST00000571995 PPIAL4DF5H284 164 aa13.47□□□□□ -0.25
RAB40B-206ENST00000571995 CLDN34H7C241 214 aa13.47□□□□□ -0.25
RAB40B-206ENST00000571995 PPIAL4FP0DN26 164 aa13.47□□□□□ -0.25
RAB40B-206ENST00000571995 ZNF146Q15072 292 aa13.47□□□□□ -0.25
RAB40B-206ENST00000571995 GFI1BQ5VTD9 330 aa13.47□□□□□ -0.25
RAB40B-206ENST00000571995 PPIAL4AQ9Y536 164 aa13.47□□□□□ -0.25
RAB40B-206ENST00000571995 TM4SF5O14894 197 aa13.47□□□□□ -0.25
RAB40B-206ENST00000571995 PSG5Q15238 335 aa13.47□□□□□ -0.25
RAB40B-206ENST00000571995 TNXAQ16473 311 aa13.47□□□□□ -0.25
RAB40B-206ENST00000571995 CLDND2Q8NHS1 167 aa13.47□□□□□ -0.25
RAB40B-206ENST00000571995 Q8WTZ3 238 aa13.47□□□□□ -0.25
RAB40B-206ENST00000571995 VAX2Q9UIW0 290 aa13.47□□□□□ -0.25
RAB40B-206ENST00000571995 ADH4P08319 380 aa13.47□□□□□ -0.25
RAB40B-206ENST00000571995 SPSB3Q6PJ21 355 aa13.47□□□□□ -0.25
RAB40B-206ENST00000571995 MRPL41Q8IXM3 137 aaKnown RBP13.47□□□□□ -0.25
RAB40B-206ENST00000571995 NCBP2LA6PVI3 153 aaKnown RBP13.46□□□□□ -0.25
RAB40B-206ENST00000571995 CXCL1P09341 107 aa13.46□□□□□ -0.25
RAB40B-206ENST00000571995 ATP5G3P48201 142 aa13.46□□□□□ -0.25
RAB40B-206ENST00000571995 ASPHD1Q5U4P2 390 aa13.46□□□□□ -0.25
RAB40B-206ENST00000571995 SLC35E4Q6ICL7 350 aa13.46□□□□□ -0.25
RAB40B-206ENST00000571995 C16orf82Q7Z2V1 217 aa13.46□□□□□ -0.25
RAB40B-206ENST00000571995 SPACA3Q8IXA5 215 aa13.46□□□□□ -0.25
RAB40B-206ENST00000571995 TCF19Q9Y242 345 aa13.46□□□□□ -0.25
RAB40B-206ENST00000571995 SSUH2Q9Y2M2 353 aa13.46□□□□□ -0.25
RAB40B-206ENST00000571995 SLC25A15Q9Y619 301 aa13.46□□□□□ -0.25
RAB40B-206ENST00000571995 IGHV3OR16-8A0A075B7F1 116 aa13.46□□□□□ -0.25
RAB40B-206ENST00000571995 GALR1P47211 349 aa13.46□□□□□ -0.25
RAB40B-206ENST00000571995 MEF2BQ02080 365 aaPredicted RBP13.46□□□□□ -0.25
RAB40B-206ENST00000571995 DOLPP1Q86YN1 238 aa13.46□□□□□ -0.25
RAB40B-206ENST00000571995 OR10W1Q8NGF6 305 aa13.46□□□□□ -0.25
RAB40B-206ENST00000571995 PCGF1Q9BSM1 259 aa13.46□□□□□ -0.25
RAB40B-206ENST00000571995 BTBD17A6NE02 478 aa13.46□□□□□ -0.26
RAB40B-206ENST00000571995 PRSS44E7EML9 344 aa13.46□□□□□ -0.26
RAB40B-206ENST00000571995 MMP23AO75900 390 aa13.46□□□□□ -0.26
RAB40B-206ENST00000571995 MT-CO2P00403 227 aa13.46□□□□□ -0.26
RAB40B-206ENST00000571995 CD3EP07766 207 aa13.46□□□□□ -0.26
RAB40B-206ENST00000571995 HTD2P86397 168 aa13.46□□□□□ -0.26
RAB40B-206ENST00000571995 HAPLN4Q86UW8 402 aa13.46□□□□□ -0.26
RAB40B-206ENST00000571995 ELOVL1Q9BW60 279 aa13.46□□□□□ -0.26
RAB40B-206ENST00000571995 OR51B2Q9Y5P1 312 aa13.46□□□□□ -0.26
RAB40B-206ENST00000571995 ZNF705FA8MVS1 300 aaPredicted RBP13.45□□□□□ -0.26
RAB40B-206ENST00000571995 HRASP01112 189 aa13.45□□□□□ -0.26
RAB40B-206ENST00000571995 ZNF705DP0CH99 300 aaPredicted RBP13.45□□□□□ -0.26
RAB40B-206ENST00000571995 ZNF705BP0CI00 300 aaPredicted RBP13.45□□□□□ -0.26
RAB40B-206ENST00000571995 ARF6P62330 175 aa13.45□□□□□ -0.26
RAB40B-206ENST00000571995 SAA2-SAA4A0A096LPE2 208 aa13.45□□□□□ -0.26
RAB40B-206ENST00000571995 PHOX2AO14813 284 aa13.45□□□□□ -0.26
RAB40B-206ENST00000571995 RAB29O14966 203 aa13.45□□□□□ -0.26
RAB40B-206ENST00000571995 IGHV1-46P01743 117 aa13.45□□□□□ -0.26
RAB40B-206ENST00000571995 SAA2P0DJI9 122 aaPredicted RBP13.45□□□□□ -0.26
RAB40B-206ENST00000571995 SPNS3Q6ZMD2 512 aa13.45□□□□□ -0.26
RAB40B-206ENST00000571995 SLC35E3Q7Z769 313 aa13.45□□□□□ -0.26
RAB40B-206ENST00000571995 PLSCR4Q9NRQ2 329 aa13.45□□□□□ -0.26
RAB40B-206ENST00000571995 MIOXQ9UGB7 285 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms