RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 CCDC71LQ8N9Z2 235 aa10.46□□□□□ -0.73
CCDC40-205ENST00000571028 RTBDNQ9BSG5 229 aaPredicted RBP10.46□□□□□ -0.73
CCDC40-205ENST00000571028 GPR132Q9UNW8 380 aa10.46□□□□□ -0.73
CCDC40-205ENST00000571028 VSIG4Q9Y279 399 aa10.46□□□□□ -0.73
CCDC40-205ENST00000571028 IGHV7-81A0A0B4J1V7 117 aa10.45□□□□□ -0.74
CCDC40-205ENST00000571028 CENPXA8MT69 81 aa10.45□□□□□ -0.74
CCDC40-205ENST00000571028 SPDEFO95238 335 aa10.45□□□□□ -0.74
CCDC40-205ENST00000571028 CNIH1O95406 144 aa10.45□□□□□ -0.74
CCDC40-205ENST00000571028 HPRT1P00492 218 aa10.45□□□□□ -0.74
CCDC40-205ENST00000571028 HRASP01112 189 aa10.45□□□□□ -0.74
CCDC40-205ENST00000571028 IGHG2P01859 326 aa10.45□□□□□ -0.74
CCDC40-205ENST00000571028 AKR1C4P17516 323 aa10.45□□□□□ -0.74
CCDC40-205ENST00000571028 CD40LGP29965 261 aa10.45□□□□□ -0.74
CCDC40-205ENST00000571028 CX3CL1P78423 397 aa10.45□□□□□ -0.74
CCDC40-205ENST00000571028 TNXAQ16473 311 aa10.45□□□□□ -0.74
CCDC40-205ENST00000571028 C10orf99Q6UWK7 81 aa10.45□□□□□ -0.74
CCDC40-205ENST00000571028 ZNF329Q86UD4 541 aa10.45□□□□□ -0.74
CCDC40-205ENST00000571028 ADAD2Q8NCV1 583 aaKnown RBP10.45□□□□□ -0.74
CCDC40-205ENST00000571028 DMBX1Q8NFW5 382 aa10.45□□□□□ -0.74
CCDC40-205ENST00000571028 GRPEL2Q8TAA5 225 aa10.45□□□□□ -0.74
CCDC40-205ENST00000571028 CD300LFQ8TDQ1 290 aa10.45□□□□□ -0.74
CCDC40-205ENST00000571028 ZNF486Q96H40 463 aaPredicted RBP10.45□□□□□ -0.74
CCDC40-205ENST00000571028 SCGB3A2Q96PL1 93 aa10.45□□□□□ -0.74
CCDC40-205ENST00000571028 FAM103A1Q9BTL3 118 aaKnown RBP10.45□□□□□ -0.74
CCDC40-205ENST00000571028 CCDC32Q9BV29 185 aa10.45□□□□□ -0.74
CCDC40-205ENST00000571028 SLC2A8Q9NY64 477 aa10.45□□□□□ -0.74
CCDC40-205ENST00000571028 WSB1Q9Y6I7 421 aa10.45□□□□□ -0.74
CCDC40-205ENST00000571028 C3orf85A0A1B0GTC6 90 aa10.44□□□□□ -0.74
CCDC40-205ENST00000571028 ATP6V0E1O15342 81 aa10.44□□□□□ -0.74
CCDC40-205ENST00000571028 KRASP01116 189 aa10.44□□□□□ -0.74
CCDC40-205ENST00000571028 HLA-DRB1P01911 266 aa10.44□□□□□ -0.74
CCDC40-205ENST00000571028 SERPINE2P07093 398 aa10.44□□□□□ -0.74
CCDC40-205ENST00000571028 G6PCP35575 357 aa10.44□□□□□ -0.74
CCDC40-205ENST00000571028 UBE2KP61086 200 aa10.44□□□□□ -0.74
CCDC40-205ENST00000571028 ERVK-16P61578 105 aa10.44□□□□□ -0.74
CCDC40-205ENST00000571028 RND3P61587 244 aa10.44□□□□□ -0.74
CCDC40-205ENST00000571028 FXYD3Q14802 87 aa10.44□□□□□ -0.74
CCDC40-205ENST00000571028 SURF2Q15527 256 aaPredicted RBP10.44□□□□□ -0.74
CCDC40-205ENST00000571028 ECSCRQ19T08 205 aa10.44□□□□□ -0.74
CCDC40-205ENST00000571028 TRIM16LQ309B1 348 aa10.44□□□□□ -0.74
CCDC40-205ENST00000571028 ZNF585BQ52M93 769 aa10.44□□□□□ -0.74
CCDC40-205ENST00000571028 PPP1R27Q86WC6 154 aa10.44□□□□□ -0.74
CCDC40-205ENST00000571028 RHOVQ96L33 236 aa10.44□□□□□ -0.74
CCDC40-205ENST00000571028 TP53RKQ96S44 253 aa10.44□□□□□ -0.74
CCDC40-205ENST00000571028 OR51J1Q9H342 316 aa10.44□□□□□ -0.74
CCDC40-205ENST00000571028 C5orf66Q9H5L9 145 aa10.44□□□□□ -0.74
CCDC40-205ENST00000571028 TCRBV4S1A1TA0A5B7 111 aa10.43□□□□□ -0.74
CCDC40-205ENST00000571028 PSMB11A5LHX3 300 aa10.43□□□□□ -0.74
CCDC40-205ENST00000571028 NAP1L6A6NFF2 107 aa10.43□□□□□ -0.74
CCDC40-205ENST00000571028 AP4M1O00189 453 aa10.43□□□□□ -0.74
CCDC40-205ENST00000571028 PLA2G10O15496 165 aa10.43□□□□□ -0.74
CCDC40-205ENST00000571028 RBFOX2O43251 390 aaKnown RBP eCLIP10.43□□□□□ -0.74
CCDC40-205ENST00000571028 LYRM1O43325 122 aa10.43□□□□□ -0.74
CCDC40-205ENST00000571028 OR2A4O95047 310 aa10.43□□□□□ -0.74
CCDC40-205ENST00000571028 CRYGBP07316 175 aa10.43□□□□□ -0.74
CCDC40-205ENST00000571028 NQO2P16083 231 aa10.43□□□□□ -0.74
CCDC40-205ENST00000571028 NDPQ00604 133 aa10.43□□□□□ -0.74
CCDC40-205ENST00000571028 EGFEM1PQ0D2K5 195 aa10.43□□□□□ -0.74
CCDC40-205ENST00000571028 KHDC1LQ5JSQ8 128 aa10.43□□□□□ -0.74
CCDC40-205ENST00000571028 STPG2Q8N412 459 aa10.43□□□□□ -0.74
CCDC40-205ENST00000571028 TEX45Q8NA69 505 aa10.43□□□□□ -0.74
CCDC40-205ENST00000571028 OR5AU1Q8NGC0 362 aa10.43□□□□□ -0.74
CCDC40-205ENST00000571028 OR2A7Q96R45 310 aa10.43□□□□□ -0.74
CCDC40-205ENST00000571028 PLEKHA2Q9HB19 425 aa10.43□□□□□ -0.74
CCDC40-205ENST00000571028 PRR13Q9NZ81 148 aa10.43□□□□□ -0.74
CCDC40-205ENST00000571028 TRAV3A0A0B4J244 114 aa10.42□□□□□ -0.74
CCDC40-205ENST00000571028 G3V318 75 aa10.42□□□□□ -0.74
CCDC40-205ENST00000571028 ARPC1BO15143 372 aaKnown RBP10.42□□□□□ -0.74
CCDC40-205ENST00000571028 ACTL6BO94805 426 aa10.42□□□□□ -0.74
CCDC40-205ENST00000571028 OR5AC1P0C628 307 aa10.42□□□□□ -0.74
CCDC40-205ENST00000571028 APELAP0DMC3 54 aa10.42□□□□□ -0.74
CCDC40-205ENST00000571028 MYOD1P15172 320 aa10.42□□□□□ -0.74
CCDC40-205ENST00000571028 VDAC1P21796 283 aa10.42□□□□□ -0.74
CCDC40-205ENST00000571028 TAS2R31P59538 309 aa10.42□□□□□ -0.74
CCDC40-205ENST00000571028 PRSS8Q16651 343 aa10.42□□□□□ -0.74
CCDC40-205ENST00000571028 OR4A47Q6IF82 309 aa10.42□□□□□ -0.74
CCDC40-205ENST00000571028 UNQ5815/PRO19632Q6UWF5 114 aa10.42□□□□□ -0.74
CCDC40-205ENST00000571028 SGPP2Q8IWX5 399 aa10.42□□□□□ -0.74
CCDC40-205ENST00000571028 CHPT1Q8WUD6 406 aa10.42□□□□□ -0.74
CCDC40-205ENST00000571028 DEDD2Q8WXF8 326 aa10.42□□□□□ -0.74
CCDC40-205ENST00000571028 PHB2Q99623 299 aa10.42□□□□□ -0.74
CCDC40-205ENST00000571028 AIFM2Q9BRQ8 373 aa10.42□□□□□ -0.74
CCDC40-205ENST00000571028 WNT10AQ9GZT5 417 aa10.42□□□□□ -0.74
CCDC40-205ENST00000571028 NAA60Q9H7X0 242 aa10.42□□□□□ -0.74
CCDC40-205ENST00000571028 ZNF430Q9H8G1 570 aaPredicted RBP10.42□□□□□ -0.74
CCDC40-205ENST00000571028 TMEM140Q9NV12 185 aa10.42□□□□□ -0.74
CCDC40-205ENST00000571028 ZMAT5Q9UDW3 170 aaKnown RBP10.42□□□□□ -0.74
CCDC40-205ENST00000571028 FLVCR2Q9UPI3 526 aa10.42□□□□□ -0.74
CCDC40-205ENST00000571028 NSG2Q9Y328 171 aa10.42□□□□□ -0.74
CCDC40-205ENST00000571028 FBXO7Q9Y3I1 522 aa10.42□□□□□ -0.74
CCDC40-205ENST00000571028 TSSC4Q9Y5U2 329 aaPredicted RBP10.42□□□□□ -0.74
CCDC40-205ENST00000571028 DNAH9Q9NYC9 4486 aa10.42□□□□□ -0.74
CCDC40-205ENST00000571028 TRAV41A0A0B4J266 112 aa10.41□□□□□ -0.74
CCDC40-205ENST00000571028 CRYM-AS1A6NIL9 109 aa10.41□□□□□ -0.74
CCDC40-205ENST00000571028 MARCH11A6NNE9 402 aa10.41□□□□□ -0.74
CCDC40-205ENST00000571028 H0Y980 276 aa10.41□□□□□ -0.74
CCDC40-205ENST00000571028 UPK1BO75841 260 aa10.41□□□□□ -0.74
CCDC40-205ENST00000571028 KBTBD11O94819 623 aa10.41□□□□□ -0.74
CCDC40-205ENST00000571028 VAMP1P23763 118 aa10.41□□□□□ -0.74
CCDC40-205ENST00000571028 SLC35B1P78383 322 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms