RNA–Protein interactions for RNA: ENST00000570979.1

SPNS2-203, Transcript of sphingolipid transporter 2, humanhuman

TSL 1 (best)

Gene SPNS2, Length 1,768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-203ENST00000570979 DEFB108AA8MXU0 73 aa16.15■□□□□ 0.18
SPNS2-203ENST00000570979 METTL15P1P0C7V9 234 aa16.15■□□□□ 0.18
SPNS2-203ENST00000570979 NQO2P16083 231 aa16.15■□□□□ 0.18
SPNS2-203ENST00000570979 TMEM267Q0VDI3 215 aaPredicted RBP16.15■□□□□ 0.18
SPNS2-203ENST00000570979 SSX9Q7RTT3 188 aa16.15■□□□□ 0.18
SPNS2-203ENST00000570979 OR4S2Q8NH73 311 aa16.15■□□□□ 0.18
SPNS2-203ENST00000570979 LINC01560Q8TB33 94 aa16.15■□□□□ 0.18
SPNS2-203ENST00000570979 DTD1Q8TEA8 209 aa16.15■□□□□ 0.18
SPNS2-203ENST00000570979 GAFA1Q96PS6 74 aa16.15■□□□□ 0.18
SPNS2-203ENST00000570979 ABHD14AQ9BUJ0 271 aa16.15■□□□□ 0.18
SPNS2-203ENST00000570979 GAL3ST2Q9H3Q3 398 aa16.15■□□□□ 0.18
SPNS2-203ENST00000570979 HRNRQ86YZ3 2850 aaPredicted RBP16.15■□□□□ 0.18
SPNS2-203ENST00000570979 PRR14LQ5THK1 2151 aa16.15■□□□□ 0.18
SPNS2-203ENST00000570979 H3BP45 60 aa16.15■□□□□ 0.18
SPNS2-203ENST00000570979 GPR37O15354 613 aa16.15■□□□□ 0.18
SPNS2-203ENST00000570979 MBP02144 154 aa16.15■□□□□ 0.18
SPNS2-203ENST00000570979 TFF1P04155 84 aa16.15■□□□□ 0.18
SPNS2-203ENST00000570979 THBDP07204 575 aa16.15■□□□□ 0.18
SPNS2-203ENST00000570979 RAB5AP20339 215 aa16.15■□□□□ 0.18
SPNS2-203ENST00000570979 NFYBP25208 207 aa16.15■□□□□ 0.18
SPNS2-203ENST00000570979 SLC38A11Q08AI6 406 aa16.15■□□□□ 0.18
SPNS2-203ENST00000570979 IZUMO4Q1ZYL8 232 aa16.15■□□□□ 0.18
SPNS2-203ENST00000570979 BTNL3Q6UXE8 466 aa16.15■□□□□ 0.18
SPNS2-203ENST00000570979 OR10P1Q8NGE3 313 aa16.15■□□□□ 0.18
SPNS2-203ENST00000570979 C5orf30Q96GV9 206 aa16.15■□□□□ 0.18
SPNS2-203ENST00000570979 IDI2-AS1Q9NZ38 188 aa16.15■□□□□ 0.18
SPNS2-203ENST00000570979 HIVEP1P15822 2718 aa16.14■□□□□ 0.17
SPNS2-203ENST00000570979 M0R1X1 148 aa16.14■□□□□ 0.17
SPNS2-203ENST00000570979 IFNA17P01571 189 aa16.14■□□□□ 0.17
SPNS2-203ENST00000570979 OR4A16Q8NH70 328 aa16.14■□□□□ 0.17
SPNS2-203ENST00000570979 DCTN5Q9BTE1 182 aa16.14■□□□□ 0.17
SPNS2-203ENST00000570979 TMEM147Q9BVK8 224 aa16.14■□□□□ 0.17
SPNS2-203ENST00000570979 LINC00312Q9Y6C7 94 aa16.14■□□□□ 0.17
SPNS2-203ENST00000570979 LINC00473A8K010 186 aa16.13■□□□□ 0.17
SPNS2-203ENST00000570979 CEBPZOSA8MTT3 80 aa16.13■□□□□ 0.17
SPNS2-203ENST00000570979 FAM157AC9JC47 383 aa16.13■□□□□ 0.17
SPNS2-203ENST00000570979 RHEBQ15382 184 aa16.13■□□□□ 0.17
SPNS2-203ENST00000570979 C17orf58Q2M2W7 97 aa16.13■□□□□ 0.17
SPNS2-203ENST00000570979 C22orf34Q6ZV56 151 aa16.13■□□□□ 0.17
SPNS2-203ENST00000570979 C2orf88Q9BSF0 95 aa16.13■□□□□ 0.17
SPNS2-203ENST00000570979 WDR61Q9GZS3 305 aaKnown RBP16.13■□□□□ 0.17
SPNS2-203ENST00000570979 SAP30LQ9HAJ7 183 aa16.13■□□□□ 0.17
SPNS2-203ENST00000570979 RBFOX3A6NFN3 312 aa16.13■□□□□ 0.17
SPNS2-203ENST00000570979 A6NNC1 897 aa16.13■□□□□ 0.17
SPNS2-203ENST00000570979 FCGR3BO75015 233 aa16.13■□□□□ 0.17
SPNS2-203ENST00000570979 CYB5R3P00387 301 aaPredicted RBP16.13■□□□□ 0.17
SPNS2-203ENST00000570979 HOXA5P20719 270 aa16.13■□□□□ 0.17
SPNS2-203ENST00000570979 GNB2P62879 340 aa16.13■□□□□ 0.17
SPNS2-203ENST00000570979 LTC4SQ16873 150 aa16.13■□□□□ 0.17
SPNS2-203ENST00000570979 NCMAPQ5T1S8 102 aa16.13■□□□□ 0.17
SPNS2-203ENST00000570979 NCR3LG1Q68D85 454 aa16.13■□□□□ 0.17
SPNS2-203ENST00000570979 CENPVQ7Z7K6 275 aaPredicted RBP16.13■□□□□ 0.17
SPNS2-203ENST00000570979 TMEM68Q96MH6 324 aa16.13■□□□□ 0.17
SPNS2-203ENST00000570979 IFI27L2Q9H2X8 130 aa16.13■□□□□ 0.17
SPNS2-203ENST00000570979 FBXO7Q9Y3I1 522 aa16.13■□□□□ 0.17
SPNS2-203ENST00000570979 PPIAL4EA0A075B759 164 aa16.12■□□□□ 0.17
SPNS2-203ENST00000570979 PPIAL4DF5H284 164 aa16.12■□□□□ 0.17
SPNS2-203ENST00000570979 PPIAL4FP0DN26 164 aa16.12■□□□□ 0.17
SPNS2-203ENST00000570979 FHITP49789 147 aa16.12■□□□□ 0.17
SPNS2-203ENST00000570979 BRWD1-AS2P59051 145 aa16.12■□□□□ 0.17
SPNS2-203ENST00000570979 PDLIM3Q53GG5 364 aaPredicted RBP16.12■□□□□ 0.17
SPNS2-203ENST00000570979 SPRNQ5BIV9 151 aa16.12■□□□□ 0.17
SPNS2-203ENST00000570979 PRAMEF5Q5TYX0 476 aa16.12■□□□□ 0.17
SPNS2-203ENST00000570979 C14orf144Q96I85 54 aa16.12■□□□□ 0.17
SPNS2-203ENST00000570979 PPIAL4AQ9Y536 164 aa16.12■□□□□ 0.17
SPNS2-203ENST00000570979 HRASP01112 189 aa16.11■□□□□ 0.17
SPNS2-203ENST00000570979 HIST1H1BP16401 226 aaKnown RBP16.11■□□□□ 0.17
SPNS2-203ENST00000570979 TAGLN2P37802 199 aaKnown RBP16.11■□□□□ 0.17
SPNS2-203ENST00000570979 CDX1P47902 265 aaPredicted RBP16.11■□□□□ 0.17
SPNS2-203ENST00000570979 HOXA4Q00056 320 aaPredicted RBP16.11■□□□□ 0.17
SPNS2-203ENST00000570979 MBD3L1Q8WWY6 194 aa16.11■□□□□ 0.17
SPNS2-203ENST00000570979 TAF15Q92804 592 aaKnown RBP eCLIP16.11■□□□□ 0.17
SPNS2-203ENST00000570979 CCL13Q99616 98 aa16.11■□□□□ 0.17
SPNS2-203ENST00000570979 MED13LQ71F56 2210 aa16.11■□□□□ 0.17
SPNS2-203ENST00000570979 B9A039 149 aa16.1■□□□□ 0.17
SPNS2-203ENST00000570979 C17orf112F2Z3M2 114 aa16.1■□□□□ 0.17
SPNS2-203ENST00000570979 F12P00748 615 aaPredicted RBP16.1■□□□□ 0.17
SPNS2-203ENST00000570979 GYPAP02724 150 aa16.1■□□□□ 0.17
SPNS2-203ENST00000570979 HSPB1P04792 205 aaKnown RBP16.1■□□□□ 0.17
SPNS2-203ENST00000570979 CD3EP07766 207 aa16.1■□□□□ 0.17
SPNS2-203ENST00000570979 DAOP14920 347 aa16.1■□□□□ 0.17
SPNS2-203ENST00000570979 PAX1P15863 534 aa16.1■□□□□ 0.17
SPNS2-203ENST00000570979 APOBEC3AP31941 199 aaPredicted RBP16.1■□□□□ 0.17
SPNS2-203ENST00000570979 CCL8P80075 99 aa16.1■□□□□ 0.17
SPNS2-203ENST00000570979 PMS2P11Q13670 270 aa16.1■□□□□ 0.17
SPNS2-203ENST00000570979 EFNB3Q15768 340 aa16.1■□□□□ 0.17
SPNS2-203ENST00000570979 TMEM41BQ5BJD5 291 aa16.1■□□□□ 0.17
SPNS2-203ENST00000570979 ZNF429Q86V71 674 aa16.1■□□□□ 0.17
SPNS2-203ENST00000570979 DEFB108BQ8NET1 73 aa16.1■□□□□ 0.17
SPNS2-203ENST00000570979 WFIKKN1Q96NZ8 548 aa16.1■□□□□ 0.17
SPNS2-203ENST00000570979 OR4C12Q96R67 309 aa16.1■□□□□ 0.17
SPNS2-203ENST00000570979 SCRT1Q9BWW7 348 aa16.1■□□□□ 0.17
SPNS2-203ENST00000570979 DYNLRB1Q9NP97 96 aa16.1■□□□□ 0.17
SPNS2-203ENST00000570979 PRRC2AP48634 2157 aaKnown RBP16.1■□□□□ 0.17
SPNS2-203ENST00000570979 IFNA1P01562 189 aa16.1■□□□□ 0.17
SPNS2-203ENST00000570979 S100A2P29034 98 aa16.1■□□□□ 0.17
SPNS2-203ENST00000570979 MRPS11P82912 194 aaKnown RBP16.1■□□□□ 0.17
SPNS2-203ENST00000570979 SSX2Q16385 188 aa16.1■□□□□ 0.17
SPNS2-203ENST00000570979 KHDC3LQ587J8 217 aa16.1■□□□□ 0.17
SPNS2-203ENST00000570979 SOHLH1Q5JUK2 328 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms