RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 RAB12Q6IQ22 244 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 Q6P435 159 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 C11orf88Q6PI97 169 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 UNQ9370/PRO34162Q6UXP9 181 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 PNKDQ8N490 385 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 SUMF2Q8NBJ7 301 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 OR6M1Q8NGM8 313 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 OR13C5Q8NGS8 318 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 CAPSLQ8WWF8 208 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 TNFRSF14Q92956 283 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 AKR1E2Q96JD6 320 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 OR5M11Q96RB7 305 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 SSX3Q99909 188 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 SELENOIQ9C0D9 397 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 TMEM133Q9H2Q1 129 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 BEX1Q9HBH7 125 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 TNFRSF19Q9NS68 423 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 NDUFB11Q9NX14 153 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 KCNIP1Q9NZI2 227 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 ZNRD1Q9P1U0 126 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 PITPNC1Q9UKF7 332 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 VPREB3Q9UKI3 123 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 TRAPPC2LQ9UL33 140 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 LSM2Q9Y333 95 aaKnown RBP2.97□□□□□ -1.93
NUP88-202ENST00000570937 AMMECR1Q9Y4X0 333 aaPredicted RBP2.97□□□□□ -1.93
NUP88-202ENST00000570937 MINOS1-NBL1R4GNA1 71 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 ANK3Q12955 4377 aaKnown RBP2.97□□□□□ -1.93
NUP88-202ENST00000570937 IGHV2-26A0A0B4J1V2 119 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 TRAV1-2A0A0B4J238 106 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 MDFIC2A0A1B0GVS7 189 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 TRDV1A0A1B0GX56 115 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 A0A1W2PRD5 423 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 A0A1W2PRF3 423 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 A0A1W2PRM7 423 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 METTL21EPA6NDL7 271 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 OOSP1A8MZH6 123 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 H3BUX3 64 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 M0QZK8 103 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 AIPO00170 330 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 SLC22A1O15245 554 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 PIN1P1O15428 100 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 ORC5O43913 435 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 SC5DO75845 299 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 SCGNO76038 276 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 NDUFA7O95182 113 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 TNFAIP8O95379 198 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 MT-ND4P03905 459 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 S100A1P23297 94 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 IL3RAP26951 378 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 PSMB9P28065 219 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 FGF9P31371 208 aaPredicted RBP2.96□□□□□ -1.94
NUP88-202ENST00000570937 GLP1RP43220 463 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 MAP2K4P45985 399 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 NPBWR1P48145 328 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 DYNLT3P51808 116 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 RAG2P55895 527 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 DLX6P56179 175 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 RPS25P62851 125 aaKnown RBP2.96□□□□□ -1.94
NUP88-202ENST00000570937 FABP5Q01469 135 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 KLRD1Q13241 179 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 MADCAM1Q13477 382 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 ARL6IP1Q15041 203 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 RAB11BQ15907 218 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 SSX2Q16385 188 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 TIMM50Q3ZCQ8 353 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 KCTD21Q4G0X4 260 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 SMUG1Q53HV7 270 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 C1orf100Q5SVJ3 147 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 UBE2UQ5VVX9 321 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 ASPHD2Q6ICH7 369 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 ZNF773Q6PK81 442 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 OR2W3Q7Z3T1 314 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 TPRA1Q86W33 373 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 C11orf42Q8N5U0 333 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 TPRX1Q8N7U7 411 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 OR52M1Q8NGK5 317 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 OR4C13Q8NGP0 309 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 OR10K1Q8NGX5 313 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 OR10X1Q8NGY0 326 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 OR9G1Q8NH87 305 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 SGMS2Q8NHU3 365 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 NDNFQ8TB73 568 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 FAM46BQ96A09 425 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 RPEQ96AT9 228 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 BSCL2Q96G97 398 aaPredicted RBP2.96□□□□□ -1.94
NUP88-202ENST00000570937 ATG101Q9BSB4 218 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 TMEM59Q9BXS4 323 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 CHIAQ9BZP6 476 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 LINC00574Q9H8X3 128 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 PLEKHA3Q9HB20 300 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 ESM1Q9NQ30 184 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 PLEKHJ1Q9NW61 149 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 IDI2-AS1Q9NZ38 188 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 ABRACLQ9P1F3 81 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 DPM3Q9P2X0 92 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 KIF25Q9UIL4 384 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 MGAT4AQ9UM21 535 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 SSR3Q9UNL2 185 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 PEX16Q9Y5Y5 336 aa2.96□□□□□ -1.94
NUP88-202ENST00000570937 V9GY05 133 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms