RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 TGIF2LYQ8IUE0 185 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 FAM216BQ8N7L0 139 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 ZNF383Q8NA42 475 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 CLDND2Q8NHS1 167 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 SFT2D1Q8WV19 159 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 RARRES2Q99969 163 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 TMEM204Q9BSN7 226 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 QTRT1Q9BXR0 403 aaKnown RBP4.41□□□□□ -1.7
SF3B3-213ENST00000569687 EIF5A2Q9GZV4 153 aaKnown RBP4.41□□□□□ -1.7
SF3B3-213ENST00000569687 SAP30LQ9HAJ7 183 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 SMCO4Q9NRQ5 59 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 TMEM14BQ9NUH8 114 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 CISD1Q9NZ45 108 aaKnown RBP4.41□□□□□ -1.7
SF3B3-213ENST00000569687 COQ3Q9NZJ6 369 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 SLC25A10Q9UBX3 287 aaPredicted RBP4.41□□□□□ -1.7
SF3B3-213ENST00000569687 SH3BGRL2Q9UJC5 107 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 FOXA2Q9Y261 457 aaPredicted RBP4.41□□□□□ -1.7
SF3B3-213ENST00000569687 ZNF257Q9Y2Q1 563 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 FBXO7Q9Y3I1 522 aa4.41□□□□□ -1.7
SF3B3-213ENST00000569687 SAA2-SAA4A0A096LPE2 208 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 LOC102723971A0A1B0GUV8 181 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 C15orf62A8K5M9 175 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 COLCA2A8K830 154 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 PRSS46E5RG02 174 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 FNDC10F2Z333 226 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 INS-IGF2F8WCM5 200 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 UPK2O00526 184 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 CCL21O00585 134 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 CYB5BO43169 146 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 MPDU1O75352 247 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 FCN3O75636 299 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 MMP23AO75900 390 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 IFNA17P01571 189 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 SAA2P0DJI9 122 aaPredicted RBP4.4□□□□□ -1.71
SF3B3-213ENST00000569687 NDUFB7P17568 137 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 LOXP28300 417 aaPredicted RBP4.4□□□□□ -1.71
SF3B3-213ENST00000569687 PPT1P50897 306 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 ZNF137PP52743 207 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 RPL31P62899 125 aaKnown RBP4.4□□□□□ -1.71
SF3B3-213ENST00000569687 ZNF726P1Q15940 193 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 RNF212Q495C1 297 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 LRRC10Q5BKY1 277 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 UTF1Q5T230 341 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 PRAMEF5Q5TYX0 476 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 ADAM5Q6NVV9 412 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 RBMS3Q6XE24 437 aaKnown RBP4.4□□□□□ -1.71
SF3B3-213ENST00000569687 LYG1Q8N1E2 194 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 ZCCHC24Q8N2G6 241 aaKnown RBP4.4□□□□□ -1.71
SF3B3-213ENST00000569687 RPP25LQ8N5L8 163 aaKnown RBP4.4□□□□□ -1.71
SF3B3-213ENST00000569687 C15orf54Q8N8G6 183 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 OR5AN1Q8NGI8 311 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 ST6GALNAC6Q969X2 333 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 RAB39BQ96DA2 213 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 ZNF714Q96N38 554 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 CLCC1Q96S66 551 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 P2RX4Q99571 388 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 PCGF1Q9BSM1 259 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 TMEM140Q9NV12 185 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 DCAF16Q9NXF7 216 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 FKBP11Q9NYL4 201 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 BET1LQ9NYM9 111 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 PRNDQ9UKY0 176 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 TCF19Q9Y242 345 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 WDR83OSQ9Y284 106 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 PIEZO2Q9H5I5 2752 aa4.4□□□□□ -1.71
SF3B3-213ENST00000569687 CHD3Q12873 2000 aaKnown RBP4.39□□□□□ -1.71
SF3B3-213ENST00000569687 RP1L1Q8IWN7 2480 aaPredicted RBP4.39□□□□□ -1.71
SF3B3-213ENST00000569687 TRAV3A0A0B4J244 114 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 IGHV1-69-2A0A0G2JMI3 117 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.39□□□□□ -1.71
SF3B3-213ENST00000569687 A0A1W2PPE3 182 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 MEX3AA1L020 520 aaKnown RBP4.39□□□□□ -1.71
SF3B3-213ENST00000569687 C7orf77A4D0Y5 90 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 C15orf61A6NNL5 157 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 SEC14L6B5MCN3 397 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 H7C2Y5 167 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 J3QR06 171 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 DVL1O14640 695 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 NUPL2O15504 423 aaKnown RBP4.39□□□□□ -1.71
SF3B3-213ENST00000569687 RBMXL2O75526 392 aaKnown RBP4.39□□□□□ -1.71
SF3B3-213ENST00000569687 KBTBD11O94819 623 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 RBP4P02753 201 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 FOLR2P14207 255 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 NFYBP25208 207 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 CD1BP29016 333 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 PPOXP50336 477 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 OR2B8PP59922 312 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 RAB11AP62491 216 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 DLK1P80370 383 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 ADORA2A-AS1P86434 159 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 FLI1Q01543 452 aaPredicted RBP4.39□□□□□ -1.71
SF3B3-213ENST00000569687 RHEBQ15382 184 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 RTL8BQ17RB0 113 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 HFEQ30201 348 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 ZNF672Q499Z4 452 aaPredicted RBP4.39□□□□□ -1.71
SF3B3-213ENST00000569687 TMEM155Q4W5P6 130 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 OR8G2PQ6IF36 304 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 OR4A47Q6IF82 309 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 LYPD2Q6UXB3 125 aa4.39□□□□□ -1.71
SF3B3-213ENST00000569687 ETV3LQ6ZN32 361 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms