RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 FXYD6Q9H0Q3 95 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 DIABLOQ9NR28 239 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 ZNF355PQ9NSJ1 428 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 KLK9Q9UKQ9 250 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 DMRT1Q9Y5R6 373 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 DYNC2H1Q8NCM8 4307 aaKnown RBP5.97□□□□□ -1.45
CDH3-209ENST00000569080 SACSQ9NZJ4 4579 aa5.97□□□□□ -1.45
CDH3-209ENST00000569080 HMX3A6NHT5 357 aa5.96□□□□□ -1.46
CDH3-209ENST00000569080 FAM223BA6NKX1 122 aa5.96□□□□□ -1.46
CDH3-209ENST00000569080 NPIPB5A8MRT5 1133 aa5.96□□□□□ -1.46
CDH3-209ENST00000569080 GABARAPO95166 117 aa5.96□□□□□ -1.46
CDH3-209ENST00000569080 LY86O95711 162 aa5.96□□□□□ -1.46
CDH3-209ENST00000569080 CRYGCP07315 174 aa5.96□□□□□ -1.46
CDH3-209ENST00000569080 NHLRC4P0CG21 123 aaPredicted RBP5.96□□□□□ -1.46
CDH3-209ENST00000569080 MYOD1P15172 320 aa5.96□□□□□ -1.46
CDH3-209ENST00000569080 AREGP15514 252 aa5.96□□□□□ -1.46
CDH3-209ENST00000569080 GNRHRP30968 328 aa5.96□□□□□ -1.46
CDH3-209ENST00000569080 KIR2DS2P43631 304 aa5.96□□□□□ -1.46
CDH3-209ENST00000569080 RPL27AP46776 148 aaKnown RBP5.96□□□□□ -1.46
CDH3-209ENST00000569080 SYNJ2BPP57105 145 aa5.96□□□□□ -1.46
CDH3-209ENST00000569080 EXOSC2Q13868 293 aaKnown RBP5.96□□□□□ -1.46
CDH3-209ENST00000569080 TMEM69Q5SWH9 247 aa5.96□□□□□ -1.46
CDH3-209ENST00000569080 OR4A47Q6IF82 309 aa5.96□□□□□ -1.46
CDH3-209ENST00000569080 TMEM17Q86X19 198 aa5.96□□□□□ -1.46
CDH3-209ENST00000569080 FAM223AQ8IWN6 122 aa5.96□□□□□ -1.46
CDH3-209ENST00000569080 Q8N1Y9 231 aa5.96□□□□□ -1.46
CDH3-209ENST00000569080 ZBTB34Q8NCN2 500 aa5.96□□□□□ -1.46
CDH3-209ENST00000569080 OR9G4Q8NGQ1 327 aa5.96□□□□□ -1.46
CDH3-209ENST00000569080 VSTM2AQ8TAG5 236 aa5.96□□□□□ -1.46
CDH3-209ENST00000569080 GIMAP1Q8WWP7 306 aa5.96□□□□□ -1.46
CDH3-209ENST00000569080 MOB3AQ96BX8 217 aa5.96□□□□□ -1.46
CDH3-209ENST00000569080 KCTD12Q96CX2 325 aaKnown RBP5.96□□□□□ -1.46
CDH3-209ENST00000569080 FANCD2OSQ96PS1 177 aa5.96□□□□□ -1.46
CDH3-209ENST00000569080 LYSTQ99698 3801 aa5.96□□□□□ -1.46
CDH3-209ENST00000569080 DCUN1D5Q9BTE7 237 aa5.96□□□□□ -1.46
CDH3-209ENST00000569080 SLC5A7Q9GZV3 580 aa5.96□□□□□ -1.46
CDH3-209ENST00000569080 VCX3AQ9NNX9 186 aa5.96□□□□□ -1.46
CDH3-209ENST00000569080 BET1LQ9NYM9 111 aa5.96□□□□□ -1.46
CDH3-209ENST00000569080 SIGLEC8Q9NYZ4 499 aa5.96□□□□□ -1.46
CDH3-209ENST00000569080 PEF1Q9UBV8 284 aaKnown RBP5.96□□□□□ -1.46
CDH3-209ENST00000569080 ZNF257Q9Y2Q1 563 aa5.96□□□□□ -1.46
CDH3-209ENST00000569080 SMAD5-AS1Q9Y6J3 95 aa5.96□□□□□ -1.46
CDH3-209ENST00000569080 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.95□□□□□ -1.46
CDH3-209ENST00000569080 TRAV3A0A0B4J244 114 aa5.95□□□□□ -1.46
CDH3-209ENST00000569080 IGLC7A0M8Q6 106 aa5.95□□□□□ -1.46
CDH3-209ENST00000569080 SULT1C2O00338 296 aa5.95□□□□□ -1.46
CDH3-209ENST00000569080 MPPED1O15442 326 aa5.95□□□□□ -1.46
CDH3-209ENST00000569080 ACTL6BO94805 426 aa5.95□□□□□ -1.46
CDH3-209ENST00000569080 S1PR2O95136 353 aa5.95□□□□□ -1.46
CDH3-209ENST00000569080 CSN3P07498 182 aa5.95□□□□□ -1.46
CDH3-209ENST00000569080 FGF2P09038 288 aa5.95□□□□□ -1.46
CDH3-209ENST00000569080 FRMD6-AS1P0C7T7 363 aa5.95□□□□□ -1.46
CDH3-209ENST00000569080 CTRB1P17538 263 aa5.95□□□□□ -1.46
CDH3-209ENST00000569080 MAS1LP35410 378 aa5.95□□□□□ -1.46
CDH3-209ENST00000569080 RFX2P48378 723 aa5.95□□□□□ -1.46
CDH3-209ENST00000569080 MECP2P51608 486 aaKnown RBP5.95□□□□□ -1.46
CDH3-209ENST00000569080 TAS2R31P59538 309 aa5.95□□□□□ -1.46
CDH3-209ENST00000569080 FXYD4P59646 89 aa5.95□□□□□ -1.46
CDH3-209ENST00000569080 VBP1P61758 197 aa5.95□□□□□ -1.46
CDH3-209ENST00000569080 RPL8P62917 257 aaKnown RBP5.95□□□□□ -1.46
CDH3-209ENST00000569080 CTF1Q16619 201 aa5.95□□□□□ -1.46
CDH3-209ENST00000569080 C15orf32Q32M92 178 aa5.95□□□□□ -1.46
CDH3-209ENST00000569080 CTRB2Q6GPI1 263 aa5.95□□□□□ -1.46
CDH3-209ENST00000569080 DHRS11Q6UWP2 260 aa5.95□□□□□ -1.46
CDH3-209ENST00000569080 ADAMTSL5Q6ZMM2 481 aa5.95□□□□□ -1.46
CDH3-209ENST00000569080 SSX9Q7RTT3 188 aa5.95□□□□□ -1.46
CDH3-209ENST00000569080 LYSMD2Q8IV50 215 aa5.95□□□□□ -1.46
CDH3-209ENST00000569080 SPAG16Q8N0X2 631 aa5.95□□□□□ -1.46
CDH3-209ENST00000569080 NECAP1Q8NC96 275 aa5.95□□□□□ -1.46
CDH3-209ENST00000569080 GPX8Q8TED1 209 aa5.95□□□□□ -1.46
CDH3-209ENST00000569080 S100A16Q96FQ6 103 aaKnown RBP5.95□□□□□ -1.46
CDH3-209ENST00000569080 CCDC140Q96MF4 163 aa5.95□□□□□ -1.46
CDH3-209ENST00000569080 WWC2-AS2Q96NR7 200 aa5.95□□□□□ -1.46
CDH3-209ENST00000569080 OR4C12Q96R67 309 aa5.95□□□□□ -1.46
CDH3-209ENST00000569080 ASCL2Q99929 193 aa5.95□□□□□ -1.46
CDH3-209ENST00000569080 NAA50Q9GZZ1 169 aaKnown RBP5.95□□□□□ -1.46
CDH3-209ENST00000569080 IFT46Q9NQC8 304 aa5.95□□□□□ -1.46
CDH3-209ENST00000569080 SLC2A9Q9NRM0 540 aa5.95□□□□□ -1.46
CDH3-209ENST00000569080 EHFQ9NZC4 300 aa5.95□□□□□ -1.46
CDH3-209ENST00000569080 U3KQK5 164 aa5.95□□□□□ -1.46
CDH3-209ENST00000569080 IGLV11-55A0A075B6I3 123 aa5.94□□□□□ -1.46
CDH3-209ENST00000569080 A8MZ25 164 aa5.94□□□□□ -1.46
CDH3-209ENST00000569080 OR2J3O76001 311 aa5.94□□□□□ -1.46
CDH3-209ENST00000569080 HPRT1P00492 218 aa5.94□□□□□ -1.46
CDH3-209ENST00000569080 HRASP01112 189 aa5.94□□□□□ -1.46
CDH3-209ENST00000569080 APOA1P02647 267 aa5.94□□□□□ -1.46
CDH3-209ENST00000569080 RLN1P04808 185 aa5.94□□□□□ -1.46
CDH3-209ENST00000569080 HLA-GP17693 338 aa5.94□□□□□ -1.46
CDH3-209ENST00000569080 EDN2P20800 178 aa5.94□□□□□ -1.46
CDH3-209ENST00000569080 PSMB6P28072 239 aa5.94□□□□□ -1.46
CDH3-209ENST00000569080 TAS2R46P59540 309 aa5.94□□□□□ -1.46
CDH3-209ENST00000569080 OR2B8PP59922 312 aa5.94□□□□□ -1.46
CDH3-209ENST00000569080 CATR1Q13166 79 aa5.94□□□□□ -1.46
CDH3-209ENST00000569080 SBSPONQ8IVN8 264 aa5.94□□□□□ -1.46
CDH3-209ENST00000569080 OR51H1Q8NH63 302 aa5.94□□□□□ -1.46
CDH3-209ENST00000569080 OR4A5Q8NH83 315 aa5.94□□□□□ -1.46
CDH3-209ENST00000569080 CMTM3Q96MX0 182 aa5.94□□□□□ -1.46
CDH3-209ENST00000569080 FYTTD1Q96QD9 318 aaKnown RBP5.94□□□□□ -1.46
CDH3-209ENST00000569080 ZNF2Q9BSG1 426 aaPredicted RBP5.94□□□□□ -1.46
CDH3-209ENST00000569080 RSRP1Q9BUV0 290 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms