RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 F11RQ9Y624 299 aaKnown RBP2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 TRAV8-4A0A0B4J246 113 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 WI2-2373I1.2A0A1W2PRP0 233 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 FTCDNL1E5RQL4 147 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 LRRN3E7EW58 273 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 F5H768 121 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 KRTAP4-16G5E9R7 235 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 K7EIL1 84 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 TNFRSF11BO00300 401 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 TRAF3IP2O43734 574 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 EIF1BO60739 113 aaKnown RBP2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 FOXH1O75593 365 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 CYB5R3P00387 301 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 P01737 135 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 IGHV1-46P01743 117 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 IGHV3-43DP0DP04 118 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 TAC1P20366 129 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 MEOX2P50222 304 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 P2RY4P51582 365 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 POLR2HP52434 150 aaKnown RBP2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 ZNF138P52744 262 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 CEBPGP53567 150 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 KLF3P57682 345 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 MTPNP58546 118 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 ACTBP60709 375 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 FGF12P61328 243 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 HBA1P69905 142 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 CD164Q04900 197 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 FUT5Q11128 374 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 MED21Q13503 144 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 C1DQ13901 141 aaKnown RBP2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 PSG5Q15238 335 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 OR1Q1Q15612 314 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 ZNF141Q15928 474 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 SGCAQ16586 387 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 GUCA2BQ16661 112 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 RGS21Q2M5E4 152 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 ARHGAP11BQ3KRB8 267 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 DNAL1Q4LDG9 190 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 LRRC10Q5BKY1 277 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 PDZD11Q5EBL8 140 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 SAXO2Q658L1 398 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 LYPD2Q6UXB3 125 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 TEX43Q6ZNM6 134 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 ZFP82Q8N141 532 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 LRRC18Q8N456 261 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 TEX29Q8N6K0 151 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 C11orf72Q8NBR9 251 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 DCUN1D4Q92564 292 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 ROPN1LQ96C74 230 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 DGCR14Q96DF8 476 aaKnown RBP2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 YIPF6Q96EC8 236 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 MRAP2Q96G30 205 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 SLC35G5Q96KT7 338 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 PGLYRP3Q96LB9 341 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 FAM19A4Q96LR4 140 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 OR2M2Q96R28 347 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 ZNF382Q96SR6 550 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 STACQ99469 402 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 MRPL57Q9BQC6 102 aaKnown RBP2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 NICN1Q9BSH3 213 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 TMEM208Q9BTX3 173 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 TAPBPLQ9BX59 468 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 OR51V1Q9H2C8 321 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 VCX3BQ9H321 246 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 EXOSC4Q9NPD3 245 aaKnown RBP2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 RRAGDQ9NQL2 400 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 ATPIF1Q9UII2 106 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 LRRC42Q9Y546 428 aa2.29□□□□□ -2.04
HMGB1P6-201ENST00000569046 DNAH9Q9NYC9 4486 aa2.28□□□□□ -2.04
HMGB1P6-201ENST00000569046 CENPVL3A0A0U1RRI6 287 aa2.28□□□□□ -2.04
HMGB1P6-201ENST00000569046 TMEM114B3SHH9 223 aa2.28□□□□□ -2.04
HMGB1P6-201ENST00000569046 J3QT63 122 aa2.28□□□□□ -2.04
HMGB1P6-201ENST00000569046 ZNF593O00488 134 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P6-201ENST00000569046 SLC31A2O15432 143 aa2.28□□□□□ -2.04
HMGB1P6-201ENST00000569046 FGF16O43320 207 aa2.28□□□□□ -2.04
HMGB1P6-201ENST00000569046 HPGDSO60760 199 aa2.28□□□□□ -2.04
HMGB1P6-201ENST00000569046 DHRS3O75911 302 aa2.28□□□□□ -2.04
HMGB1P6-201ENST00000569046 SERF1AO75920 110 aa2.28□□□□□ -2.04
HMGB1P6-201ENST00000569046 PTHP01270 115 aa2.28□□□□□ -2.04
HMGB1P6-201ENST00000569046 IFNA5P01569 189 aa2.28□□□□□ -2.04
HMGB1P6-201ENST00000569046 IGHMP01871 453 aa2.28□□□□□ -2.04
HMGB1P6-201ENST00000569046 TFPTP0C1Z6 253 aa2.28□□□□□ -2.04
HMGB1P6-201ENST00000569046 RAB3BP20337 219 aa2.28□□□□□ -2.04
HMGB1P6-201ENST00000569046 MAGEA12P43365 314 aa2.28□□□□□ -2.04
HMGB1P6-201ENST00000569046 EVX1P49640 407 aa2.28□□□□□ -2.04
HMGB1P6-201ENST00000569046 ERFP50548 548 aa2.28□□□□□ -2.04
HMGB1P6-201ENST00000569046 AP3S2P59780 193 aa2.28□□□□□ -2.04
HMGB1P6-201ENST00000569046 TNFAIP6P98066 277 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P6-201ENST00000569046 CKAP4Q07065 602 aaKnown RBP2.28□□□□□ -2.04
HMGB1P6-201ENST00000569046 MLLT11Q13015 90 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P6-201ENST00000569046 RBMY1FQ15415 496 aaKnown RBP2.28□□□□□ -2.04
HMGB1P6-201ENST00000569046 LY6EQ16553 131 aa2.28□□□□□ -2.04
HMGB1P6-201ENST00000569046 CASC10Q5T4H9 136 aa2.28□□□□□ -2.04
HMGB1P6-201ENST00000569046 MRPL2Q5T653 305 aaKnown RBP2.28□□□□□ -2.04
HMGB1P6-201ENST00000569046 KPRPQ5T749 579 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P6-201ENST00000569046 C1orf140Q5VVS0 124 aa2.28□□□□□ -2.04
HMGB1P6-201ENST00000569046 RSBN1Q5VWQ0 802 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P6-201ENST00000569046 METTL21CQ5VZV1 264 aa2.28□□□□□ -2.04
HMGB1P6-201ENST00000569046 OTPQ5XKR4 325 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms