RNA–Protein interactions for RNA: ENST00000568886.5

VAC14-211, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-211ENST00000568886 HAPLN4Q86UW8 402 aa12.69□□□□□ -0.38
VAC14-211ENST00000568886 Q96MF0 132 aa12.69□□□□□ -0.38
VAC14-211ENST00000568886 P2RX4Q99571 388 aa12.69□□□□□ -0.38
VAC14-211ENST00000568886 NOTCH2Q04721 2471 aa12.69□□□□□ -0.38
VAC14-211ENST00000568886 METTL15P1P0C7V9 234 aa12.69□□□□□ -0.38
VAC14-211ENST00000568886 LOXL1Q08397 574 aaPredicted RBP12.69□□□□□ -0.38
VAC14-211ENST00000568886 ARL16Q0P5N6 197 aa12.69□□□□□ -0.38
VAC14-211ENST00000568886 ZNF726P1Q15940 193 aa12.69□□□□□ -0.38
VAC14-211ENST00000568886 LURAP1LQ8IV03 231 aa12.69□□□□□ -0.38
VAC14-211ENST00000568886 GGACTQ9BVM4 153 aa12.69□□□□□ -0.38
VAC14-211ENST00000568886 ZNF665Q9H7R5 613 aa12.69□□□□□ -0.38
VAC14-211ENST00000568886 DOK5Q9P104 306 aa12.69□□□□□ -0.38
VAC14-211ENST00000568886 URGCP-MRPS24S4R325 110 aa12.69□□□□□ -0.38
VAC14-211ENST00000568886 TGIF2-C20orf24A0A0A6YYL0 155 aa12.68□□□□□ -0.38
VAC14-211ENST00000568886 IFITM10A6NMD0 228 aa12.68□□□□□ -0.38
VAC14-211ENST00000568886 FAM90A26D6RGX4 464 aa12.68□□□□□ -0.38
VAC14-211ENST00000568886 C3orf80F5H4A9 247 aa12.68□□□□□ -0.38
VAC14-211ENST00000568886 YIF1AO95070 293 aa12.68□□□□□ -0.38
VAC14-211ENST00000568886 IAPPP10997 89 aa12.68□□□□□ -0.38
VAC14-211ENST00000568886 RND2P52198 227 aa12.68□□□□□ -0.38
VAC14-211ENST00000568886 RAB11AP62491 216 aa12.68□□□□□ -0.38
VAC14-211ENST00000568886 PMS2P11Q13670 270 aa12.68□□□□□ -0.38
VAC14-211ENST00000568886 RCC1LQ96I51 464 aaKnown RBP12.68□□□□□ -0.38
VAC14-211ENST00000568886 OR14J1Q9UGF5 321 aa12.68□□□□□ -0.38
VAC14-211ENST00000568886 SETXQ7Z333 2677 aaKnown RBP12.67□□□□□ -0.38
VAC14-211ENST00000568886 OR2H2O95918 312 aa12.67□□□□□ -0.38
VAC14-211ENST00000568886 USF1P22415 310 aaPredicted RBP12.67□□□□□ -0.38
VAC14-211ENST00000568886 SPNS3Q6ZMD2 512 aa12.67□□□□□ -0.38
VAC14-211ENST00000568886 WFDC11Q8NEX6 87 aa12.67□□□□□ -0.38
VAC14-211ENST00000568886 PINX1Q96BK5 328 aaKnown RBP12.67□□□□□ -0.38
VAC14-211ENST00000568886 SDSLQ96GA7 329 aa12.67□□□□□ -0.38
VAC14-211ENST00000568886 PATZ1Q9HBE1 687 aaKnown RBP12.67□□□□□ -0.38
VAC14-211ENST00000568886 MBNL3Q9NUK0 354 aaKnown RBP12.67□□□□□ -0.38
VAC14-211ENST00000568886 CSMD1Q96PZ7 3565 aa12.67□□□□□ -0.38
VAC14-211ENST00000568886 IGKV1D-17A0A075B6S4 117 aa12.67□□□□□ -0.38
VAC14-211ENST00000568886 ZFP92A6NM28 416 aa12.67□□□□□ -0.38
VAC14-211ENST00000568886 TGOLN2O43493 480 aa12.67□□□□□ -0.38
VAC14-211ENST00000568886 HIST1H2BKO60814 126 aa12.67□□□□□ -0.38
VAC14-211ENST00000568886 HIST1H2BJP06899 126 aa12.67□□□□□ -0.38
VAC14-211ENST00000568886 HIST1H2BOP23527 126 aa12.67□□□□□ -0.38
VAC14-211ENST00000568886 HIST1H2BBP33778 126 aa12.67□□□□□ -0.38
VAC14-211ENST00000568886 NDUFA6P56556 154 aa12.67□□□□□ -0.38
VAC14-211ENST00000568886 HIST1H2BDP58876 126 aa12.67□□□□□ -0.38
VAC14-211ENST00000568886 HIST1H2BCP62807 126 aa12.67□□□□□ -0.38
VAC14-211ENST00000568886 HIST2H2BEQ16778 126 aa12.67□□□□□ -0.38
VAC14-211ENST00000568886 TMEM41BQ5BJD5 291 aa12.67□□□□□ -0.38
VAC14-211ENST00000568886 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.67□□□□□ -0.38
VAC14-211ENST00000568886 ZNF788Q6ZQV5 615 aa12.67□□□□□ -0.38
VAC14-211ENST00000568886 LILRB2Q8N423 598 aa12.67□□□□□ -0.38
VAC14-211ENST00000568886 EDARADDQ8WWZ3 215 aa12.67□□□□□ -0.38
VAC14-211ENST00000568886 HIST1H2BHQ93079 126 aa12.67□□□□□ -0.38
VAC14-211ENST00000568886 HIST1H2BNQ99877 126 aa12.67□□□□□ -0.38
VAC14-211ENST00000568886 HIST1H2BMQ99879 126 aa12.67□□□□□ -0.38
VAC14-211ENST00000568886 WDR61Q9GZS3 305 aaKnown RBP12.67□□□□□ -0.38
VAC14-211ENST00000568886 VSIRQ9H7M9 311 aa12.67□□□□□ -0.38
VAC14-211ENST00000568886 TRAPPC2LQ9UL33 140 aa12.67□□□□□ -0.38
VAC14-211ENST00000568886 KCNS2Q9ULS6 477 aa12.67□□□□□ -0.38
VAC14-211ENST00000568886 AKAP9Q99996 3911 aa12.67□□□□□ -0.38
VAC14-211ENST00000568886 CCDC168Q8NDH2 2452 aa12.66□□□□□ -0.38
VAC14-211ENST00000568886 IGHV3OR15-7A0A075B7D8 119 aa12.66□□□□□ -0.38
VAC14-211ENST00000568886 IGHV4-61A0A0C4DH41 118 aa12.66□□□□□ -0.38
VAC14-211ENST00000568886 NKX6-3A6NJ46 265 aa12.66□□□□□ -0.38
VAC14-211ENST00000568886 RNF212BA8MTL3 300 aa12.66□□□□□ -0.38
VAC14-211ENST00000568886 SIRPB1O00241 398 aa12.66□□□□□ -0.38
VAC14-211ENST00000568886 CYB5BO43169 146 aa12.66□□□□□ -0.38
VAC14-211ENST00000568886 HOXA4Q00056 320 aaPredicted RBP12.66□□□□□ -0.38
VAC14-211ENST00000568886 LCN15Q6UWW0 184 aa12.66□□□□□ -0.38
VAC14-211ENST00000568886 DEFB108BQ8NET1 73 aa12.66□□□□□ -0.38
VAC14-211ENST00000568886 C1orf159Q96HA4 380 aa12.66□□□□□ -0.38
VAC14-211ENST00000568886 GAR1Q9NY12 217 aaKnown RBP12.66□□□□□ -0.38
VAC14-211ENST00000568886 VAX2Q9UIW0 290 aa12.66□□□□□ -0.38
VAC14-211ENST00000568886 RBM7Q9Y580 266 aaKnown RBP12.66□□□□□ -0.38
VAC14-211ENST00000568886 SEC14L6B5MCN3 397 aa12.66□□□□□ -0.38
VAC14-211ENST00000568886 CLDN34H7C241 214 aa12.66□□□□□ -0.38
VAC14-211ENST00000568886 GYPAP02724 150 aa12.66□□□□□ -0.38
VAC14-211ENST00000568886 S100A2P29034 98 aa12.66□□□□□ -0.38
VAC14-211ENST00000568886 PRDX2P32119 198 aa12.66□□□□□ -0.38
VAC14-211ENST00000568886 LMO4P61968 165 aa12.66□□□□□ -0.38
VAC14-211ENST00000568886 SSX7Q7RTT5 188 aa12.66□□□□□ -0.38
VAC14-211ENST00000568886 DRAM1Q8N682 238 aa12.66□□□□□ -0.38
VAC14-211ENST00000568886 NEIL1Q96FI4 390 aaPredicted RBP12.66□□□□□ -0.38
VAC14-211ENST00000568886 TIMM9Q9Y5J7 89 aa12.66□□□□□ -0.38
VAC14-211ENST00000568886 DMRT1Q9Y5R6 373 aa12.66□□□□□ -0.38
VAC14-211ENST00000568886 TRAV39A0A0B4J263 110 aa12.65□□□□□ -0.38
VAC14-211ENST00000568886 SH2D1BO14796 132 aa12.65□□□□□ -0.38
VAC14-211ENST00000568886 IFNA1P01562 189 aa12.65□□□□□ -0.38
VAC14-211ENST00000568886 PRR18Q8N4B5 295 aa12.65□□□□□ -0.38
VAC14-211ENST00000568886 FAM210BQ96KR6 192 aa12.65□□□□□ -0.38
VAC14-211ENST00000568886 GAFA1Q96PS6 74 aa12.65□□□□□ -0.38
VAC14-211ENST00000568886 OR4C12Q96R67 309 aa12.65□□□□□ -0.38
VAC14-211ENST00000568886 FAM234AQ9H0X4 552 aa12.65□□□□□ -0.38
VAC14-211ENST00000568886 SDF2L1Q9HCN8 221 aa12.65□□□□□ -0.38
VAC14-211ENST00000568886 ELOA3CA0A087WX78 387 aaPredicted RBP12.64□□□□□ -0.39
VAC14-211ENST00000568886 TRAV20A0A0B4J274 112 aa12.64□□□□□ -0.39
VAC14-211ENST00000568886 MAP1LC3B2A6NCE7 125 aa12.64□□□□□ -0.39
VAC14-211ENST00000568886 HAND1O96004 215 aa12.64□□□□□ -0.39
VAC14-211ENST00000568886 ZNF16P17020 682 aaPredicted RBP12.64□□□□□ -0.39
VAC14-211ENST00000568886 FAM209BQ5JX69 171 aa12.64□□□□□ -0.39
VAC14-211ENST00000568886 CD177Q8N6Q3 437 aa12.64□□□□□ -0.39
VAC14-211ENST00000568886 OR8B3Q8NGG8 313 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms