RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 RPL35AP18077 110 aaKnown RBP11.04□□□□□ -0.64
USB1-214ENST00000568848 RAB3BP20337 219 aa11.04□□□□□ -0.64
USB1-214ENST00000568848 MYL9P24844 172 aa11.04□□□□□ -0.64
USB1-214ENST00000568848 VMA21Q3ZAQ7 101 aa11.04□□□□□ -0.64
USB1-214ENST00000568848 ZNF57Q68EA5 555 aaPredicted RBP11.04□□□□□ -0.64
USB1-214ENST00000568848 SLC16A13Q7RTY0 426 aa11.04□□□□□ -0.64
USB1-214ENST00000568848 FAM223AQ8IWN6 122 aa11.04□□□□□ -0.64
USB1-214ENST00000568848 OR56B1Q8NGI3 324 aa11.04□□□□□ -0.64
USB1-214ENST00000568848 TMEM68Q96MH6 324 aa11.04□□□□□ -0.64
USB1-214ENST00000568848 FYTTD1Q96QD9 318 aaKnown RBP11.04□□□□□ -0.64
USB1-214ENST00000568848 GPHA2Q96T91 129 aa11.04□□□□□ -0.64
USB1-214ENST00000568848 YTHDF1Q9BYJ9 559 aaKnown RBP11.04□□□□□ -0.64
USB1-214ENST00000568848 RIMS4Q9H426 269 aaPredicted RBP11.04□□□□□ -0.64
USB1-214ENST00000568848 ELF5Q9UKW6 265 aaPredicted RBP11.04□□□□□ -0.64
USB1-214ENST00000568848 RAB22AQ9UL26 194 aa11.04□□□□□ -0.64
USB1-214ENST00000568848 NUPR2A6NF83 97 aa11.03□□□□□ -0.64
USB1-214ENST00000568848 MFSD2BA6NFX1 497 aa11.03□□□□□ -0.64
USB1-214ENST00000568848 GGCTO75223 188 aaKnown RBP11.03□□□□□ -0.64
USB1-214ENST00000568848 FCGR3AP08637 254 aa11.03□□□□□ -0.64
USB1-214ENST00000568848 DUTP33316 252 aaKnown RBP11.03□□□□□ -0.64
USB1-214ENST00000568848 ARL3P36405 182 aa11.03□□□□□ -0.64
USB1-214ENST00000568848 RPL30P62888 115 aaKnown RBP11.03□□□□□ -0.64
USB1-214ENST00000568848 RTL8BQ17RB0 113 aa11.03□□□□□ -0.64
USB1-214ENST00000568848 TEX45Q8NA69 505 aa11.03□□□□□ -0.64
USB1-214ENST00000568848 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.03□□□□□ -0.64
USB1-214ENST00000568848 TXNL4BQ9NX01 149 aaKnown RBP11.03□□□□□ -0.64
USB1-214ENST00000568848 DYNC1H1Q14204 4646 aaKnown RBP11.03□□□□□ -0.64
USB1-214ENST00000568848 ABCA13Q86UQ4 5058 aa11.03□□□□□ -0.64
USB1-214ENST00000568848 SPRY2O43597 315 aa11.02□□□□□ -0.65
USB1-214ENST00000568848 FCGR3BO75015 233 aa11.02□□□□□ -0.65
USB1-214ENST00000568848 IL6RP08887 468 aaPredicted RBP11.02□□□□□ -0.65
USB1-214ENST00000568848 GNB3P16520 340 aa11.02□□□□□ -0.65
USB1-214ENST00000568848 FCGR2BP31994 310 aaPredicted RBP11.02□□□□□ -0.65
USB1-214ENST00000568848 ZNF124Q15973 351 aa11.02□□□□□ -0.65
USB1-214ENST00000568848 TTC9CQ8N5M4 171 aa11.02□□□□□ -0.65
USB1-214ENST00000568848 NECAP1Q8NC96 275 aa11.02□□□□□ -0.65
USB1-214ENST00000568848 OR4A4PQ8NGN8 299 aa11.02□□□□□ -0.65
USB1-214ENST00000568848 KCTD12Q96CX2 325 aaKnown RBP11.02□□□□□ -0.65
USB1-214ENST00000568848 RAB3CQ96E17 227 aa11.02□□□□□ -0.65
USB1-214ENST00000568848 FANCD2OSQ96PS1 177 aa11.02□□□□□ -0.65
USB1-214ENST00000568848 DCUN1D5Q9BTE7 237 aa11.02□□□□□ -0.65
USB1-214ENST00000568848 CABLES2Q9BTV7 478 aa11.02□□□□□ -0.65
USB1-214ENST00000568848 TECRQ9NZ01 308 aaKnown RBP11.02□□□□□ -0.65
USB1-214ENST00000568848 RBM7Q9Y580 266 aaKnown RBP11.02□□□□□ -0.65
USB1-214ENST00000568848 IGHV3OR16-8A0A075B7F1 116 aa11.01□□□□□ -0.65
USB1-214ENST00000568848 TRBV6-7A0A0A0MS04 114 aa11.01□□□□□ -0.65
USB1-214ENST00000568848 GALP22466 123 aa11.01□□□□□ -0.65
USB1-214ENST00000568848 CBX3Q13185 183 aa11.01□□□□□ -0.65
USB1-214ENST00000568848 ZNF585BQ52M93 769 aa11.01□□□□□ -0.65
USB1-214ENST00000568848 ZNF773Q6PK81 442 aa11.01□□□□□ -0.65
USB1-214ENST00000568848 OR10R2Q8NGX6 335 aa11.01□□□□□ -0.65
USB1-214ENST00000568848 OR10J5Q8NHC4 309 aa11.01□□□□□ -0.65
USB1-214ENST00000568848 OR51E2Q9H255 320 aa11.01□□□□□ -0.65
USB1-214ENST00000568848 RNF167Q9H6Y7 350 aa11.01□□□□□ -0.65
USB1-214ENST00000568848 RRP15Q9Y3B9 282 aaKnown RBP11.01□□□□□ -0.65
USB1-214ENST00000568848 DNAH17Q9UFH2 4485 aa11□□□□□ -0.65
USB1-214ENST00000568848 LGALS9O00182 355 aa11□□□□□ -0.65
USB1-214ENST00000568848 RPA2P15927 270 aa11□□□□□ -0.65
USB1-214ENST00000568848 CTRB1P17538 263 aa11□□□□□ -0.65
USB1-214ENST00000568848 FGF9P31371 208 aaPredicted RBP11□□□□□ -0.65
USB1-214ENST00000568848 RANBP1P43487 201 aa11□□□□□ -0.65
USB1-214ENST00000568848 NANOS2P60321 138 aaKnown RBP11□□□□□ -0.65
USB1-214ENST00000568848 CDK10Q15131 360 aa11□□□□□ -0.65
USB1-214ENST00000568848 CTRB2Q6GPI1 263 aa11□□□□□ -0.65
USB1-214ENST00000568848 PHLDA1Q8WV24 401 aaPredicted RBP11□□□□□ -0.65
USB1-214ENST00000568848 FCGR1BQ92637 280 aa11□□□□□ -0.65
USB1-214ENST00000568848 MGAT4AQ9UM21 535 aa11□□□□□ -0.65
USB1-214ENST00000568848 SSR3Q9UNL2 185 aa11□□□□□ -0.65
USB1-214ENST00000568848 CGB1A6NKQ9 187 aa10.99□□□□□ -0.65
USB1-214ENST00000568848 ACTL6BO94805 426 aa10.99□□□□□ -0.65
USB1-214ENST00000568848 CLEC2LP0C7M8 214 aa10.99□□□□□ -0.65
USB1-214ENST00000568848 HIST1H1DP16402 221 aaKnown RBP10.99□□□□□ -0.65
USB1-214ENST00000568848 RAB6AP20340 208 aa10.99□□□□□ -0.65
USB1-214ENST00000568848 MRPS15P82914 257 aaKnown RBP10.99□□□□□ -0.65
USB1-214ENST00000568848 NEDD8Q15843 81 aa10.99□□□□□ -0.65
USB1-214ENST00000568848 SSX9Q7RTT3 188 aa10.99□□□□□ -0.65
USB1-214ENST00000568848 GPHB5Q86YW7 130 aa10.99□□□□□ -0.65
USB1-214ENST00000568848 H1FOOQ8IZA3 346 aaPredicted RBP10.99□□□□□ -0.65
USB1-214ENST00000568848 OR1L6Q8NGR2 347 aa10.99□□□□□ -0.65
USB1-214ENST00000568848 OR5B3Q8NH48 314 aa10.99□□□□□ -0.65
USB1-214ENST00000568848 SPIN2AQ99865 258 aa10.99□□□□□ -0.65
USB1-214ENST00000568848 SPIN2BQ9BPZ2 258 aa10.99□□□□□ -0.65
USB1-214ENST00000568848 GINS4Q9BRT9 223 aa10.99□□□□□ -0.65
USB1-214ENST00000568848 ATG5Q9H1Y0 275 aa10.99□□□□□ -0.65
USB1-214ENST00000568848 DNAH11Q96DT5 4516 aa10.98□□□□□ -0.65
USB1-214ENST00000568848 IGKV1D-13A0A0B4J2D9 117 aa10.98□□□□□ -0.65
USB1-214ENST00000568848 NOTOA8MTQ0 251 aa10.98□□□□□ -0.65
USB1-214ENST00000568848 MFNGO00587 321 aa10.98□□□□□ -0.65
USB1-214ENST00000568848 DEFB4AO15263 64 aa10.98□□□□□ -0.65
USB1-214ENST00000568848 ZNF207O43670 478 aaKnown RBP10.98□□□□□ -0.65
USB1-214ENST00000568848 IGKV1-13P0DP09 117 aa10.98□□□□□ -0.65
USB1-214ENST00000568848 NFYAP23511 347 aaPredicted RBP10.98□□□□□ -0.65
USB1-214ENST00000568848 GADD45AP24522 165 aa10.98□□□□□ -0.65
USB1-214ENST00000568848 GPR183P32249 361 aa10.98□□□□□ -0.65
USB1-214ENST00000568848 BRWD1-AS2P59051 145 aa10.98□□□□□ -0.65
USB1-214ENST00000568848 MXD1Q05195 221 aa10.98□□□□□ -0.65
USB1-214ENST00000568848 ODF3L2Q3SX64 289 aa10.98□□□□□ -0.65
USB1-214ENST00000568848 FBXL17Q9UF56 701 aa10.98□□□□□ -0.65
USB1-214ENST00000568848 DAPK2Q9UIK4 370 aa10.98□□□□□ -0.65
USB1-214ENST00000568848 IGHV3-21A0A0B4J1V1 117 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms