RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 TM4SF20Q53R12 229 aa11.76□□□□□ -0.53
HERPUD1-215ENST00000568676 CLEC19AQ6UXS0 136 aa11.76□□□□□ -0.53
HERPUD1-215ENST00000568676 RBPMS2Q6ZRY4 209 aaKnown RBP11.76□□□□□ -0.53
HERPUD1-215ENST00000568676 LYG2Q86SG7 212 aa11.76□□□□□ -0.53
HERPUD1-215ENST00000568676 SLC38A6Q8IZM9 456 aa11.76□□□□□ -0.53
HERPUD1-215ENST00000568676 OR1L6Q8NGR2 347 aa11.76□□□□□ -0.53
HERPUD1-215ENST00000568676 CACNG8Q8WXS5 425 aa11.76□□□□□ -0.53
HERPUD1-215ENST00000568676 CXorf58Q96LI9 332 aa11.76□□□□□ -0.53
HERPUD1-215ENST00000568676 CCDC140Q96MF4 163 aa11.76□□□□□ -0.53
HERPUD1-215ENST00000568676 OR2A7Q96R45 310 aa11.76□□□□□ -0.53
HERPUD1-215ENST00000568676 MRPL27Q9P0M9 148 aaKnown RBP11.76□□□□□ -0.53
HERPUD1-215ENST00000568676 MLXQ9UH92 298 aa11.76□□□□□ -0.53
HERPUD1-215ENST00000568676 KIR2DL5BA0A0G2JN68 375 aa11.75□□□□□ -0.53
HERPUD1-215ENST00000568676 KIR2DL5BA0A0G2JPC4 375 aa11.75□□□□□ -0.53
HERPUD1-215ENST00000568676 A0A0J9YWU9 116 aa11.75□□□□□ -0.53
HERPUD1-215ENST00000568676 METTL21EPA6NDL7 271 aa11.75□□□□□ -0.53
HERPUD1-215ENST00000568676 PTGES3LE9PB15 166 aa11.75□□□□□ -0.53
HERPUD1-215ENST00000568676 SPRY2O43597 315 aa11.75□□□□□ -0.53
HERPUD1-215ENST00000568676 KBTBD11O94819 623 aa11.75□□□□□ -0.53
HERPUD1-215ENST00000568676 ZNF735P0CB33 412 aa11.75□□□□□ -0.53
HERPUD1-215ENST00000568676 HIST1H1DP16402 221 aaKnown RBP11.75□□□□□ -0.53
HERPUD1-215ENST00000568676 RAB6AP20340 208 aa11.75□□□□□ -0.53
HERPUD1-215ENST00000568676 EDN2P20800 178 aa11.75□□□□□ -0.53
HERPUD1-215ENST00000568676 CALRP27797 417 aaKnown RBP11.75□□□□□ -0.53
HERPUD1-215ENST00000568676 PSMB6P28072 239 aa11.75□□□□□ -0.53
HERPUD1-215ENST00000568676 C10orf55Q5SWW7 151 aa11.75□□□□□ -0.53
HERPUD1-215ENST00000568676 KIR2DL5AQ8N109 375 aa11.75□□□□□ -0.53
HERPUD1-215ENST00000568676 OR4S2Q8NH73 311 aa11.75□□□□□ -0.53
HERPUD1-215ENST00000568676 KIR2DL5BQ8NHK3 375 aa11.75□□□□□ -0.53
HERPUD1-215ENST00000568676 TMEM167AQ8TBQ9 72 aa11.75□□□□□ -0.53
HERPUD1-215ENST00000568676 FANCD2OSQ96PS1 177 aa11.75□□□□□ -0.53
HERPUD1-215ENST00000568676 HSD17B10Q99714 261 aaKnown RBP11.75□□□□□ -0.53
HERPUD1-215ENST00000568676 HMX3A6NHT5 357 aa11.74□□□□□ -0.53
HERPUD1-215ENST00000568676 SCAF4O95104 1147 aaKnown RBP11.74□□□□□ -0.53
HERPUD1-215ENST00000568676 C8orf88P0DMB2 117 aa11.74□□□□□ -0.53
HERPUD1-215ENST00000568676 MYOD1P15172 320 aa11.74□□□□□ -0.53
HERPUD1-215ENST00000568676 GNB3P16520 340 aa11.74□□□□□ -0.53
HERPUD1-215ENST00000568676 DTYMKP23919 212 aa11.74□□□□□ -0.53
HERPUD1-215ENST00000568676 IRF3Q14653 427 aa11.74□□□□□ -0.53
HERPUD1-215ENST00000568676 BTNL8Q6UX41 500 aa11.74□□□□□ -0.53
HERPUD1-215ENST00000568676 PUSL1Q8N0Z8 303 aaKnown RBP11.74□□□□□ -0.53
HERPUD1-215ENST00000568676 OR2C3Q8N628 320 aa11.74□□□□□ -0.53
HERPUD1-215ENST00000568676 SPAG8Q99932 426 aaPredicted RBP11.74□□□□□ -0.53
HERPUD1-215ENST00000568676 AIFM2Q9BRQ8 373 aa11.74□□□□□ -0.53
HERPUD1-215ENST00000568676 VCX3BQ9H321 246 aa11.74□□□□□ -0.53
HERPUD1-215ENST00000568676 ACOT13Q9NPJ3 140 aa11.74□□□□□ -0.53
HERPUD1-215ENST00000568676 RBMX2Q9Y388 322 aaKnown RBP11.74□□□□□ -0.53
HERPUD1-215ENST00000568676 UFC1Q9Y3C8 167 aa11.74□□□□□ -0.53
HERPUD1-215ENST00000568676 OR2W1Q9Y3N9 320 aa11.74□□□□□ -0.53
HERPUD1-215ENST00000568676 RAB27BO00194 218 aa11.73□□□□□ -0.53
HERPUD1-215ENST00000568676 PDCD5O14737 125 aa11.73□□□□□ -0.53
HERPUD1-215ENST00000568676 HLA-DQB1P01920 261 aa11.73□□□□□ -0.53
HERPUD1-215ENST00000568676 IL6RP08887 468 aaPredicted RBP11.73□□□□□ -0.53
HERPUD1-215ENST00000568676 CTRB1P17538 263 aa11.73□□□□□ -0.53
HERPUD1-215ENST00000568676 MLLT11Q13015 90 aaPredicted RBP11.73□□□□□ -0.53
HERPUD1-215ENST00000568676 LGALS9CQ6DKI2 356 aa11.73□□□□□ -0.53
HERPUD1-215ENST00000568676 CTRB2Q6GPI1 263 aa11.73□□□□□ -0.53
HERPUD1-215ENST00000568676 MAFIPQ8WZ33 124 aa11.73□□□□□ -0.53
HERPUD1-215ENST00000568676 C5orf66Q9H5L9 145 aa11.73□□□□□ -0.53
HERPUD1-215ENST00000568676 THYN1Q9P016 225 aa11.73□□□□□ -0.53
HERPUD1-215ENST00000568676 HRASP01112 189 aa11.72□□□□□ -0.53
HERPUD1-215ENST00000568676 HSMCR30P0CW71 290 aa11.72□□□□□ -0.53
HERPUD1-215ENST00000568676 DEFA4P12838 97 aa11.72□□□□□ -0.53
HERPUD1-215ENST00000568676 RPS25P62851 125 aaKnown RBP11.72□□□□□ -0.53
HERPUD1-215ENST00000568676 HES5Q5TA89 166 aa11.72□□□□□ -0.53
HERPUD1-215ENST00000568676 STPG3Q8N7X2 389 aa11.72□□□□□ -0.53
HERPUD1-215ENST00000568676 OR4A5Q8NH83 315 aa11.72□□□□□ -0.53
HERPUD1-215ENST00000568676 DCSTAMPQ9H295 470 aa11.72□□□□□ -0.53
HERPUD1-215ENST00000568676 TPRKBQ9Y3C4 175 aa11.72□□□□□ -0.53
HERPUD1-215ENST00000568676 FRAS1Q86XX4 4008 aa11.72□□□□□ -0.53
HERPUD1-215ENST00000568676 IGLV11-55A0A075B6I3 123 aa11.71□□□□□ -0.53
HERPUD1-215ENST00000568676 A0A075B6Q4 140 aa11.71□□□□□ -0.53
HERPUD1-215ENST00000568676 TSPAN4O14817 238 aa11.71□□□□□ -0.53
HERPUD1-215ENST00000568676 IGHV3-23P01764 117 aa11.71□□□□□ -0.53
HERPUD1-215ENST00000568676 CLEC3BP05452 202 aa11.71□□□□□ -0.53
HERPUD1-215ENST00000568676 RPL8P62917 257 aaKnown RBP11.71□□□□□ -0.53
HERPUD1-215ENST00000568676 ZNF585BQ52M93 769 aa11.71□□□□□ -0.53
HERPUD1-215ENST00000568676 LAMTOR1Q6IAA8 161 aa11.71□□□□□ -0.53
HERPUD1-215ENST00000568676 ZNF66Q6ZN08 573 aa11.71□□□□□ -0.53
HERPUD1-215ENST00000568676 VKORC1L1Q8N0U8 176 aa11.71□□□□□ -0.53
HERPUD1-215ENST00000568676 RNF183Q96D59 192 aa11.71□□□□□ -0.53
HERPUD1-215ENST00000568676 SRSF8Q9BRL6 282 aaKnown RBP11.71□□□□□ -0.53
HERPUD1-215ENST00000568676 TRAV1-2A0A0B4J238 106 aa11.7□□□□□ -0.54
HERPUD1-215ENST00000568676 IFITM5A6NNB3 132 aa11.7□□□□□ -0.54
HERPUD1-215ENST00000568676 E7EUB6 86 aa11.7□□□□□ -0.54
HERPUD1-215ENST00000568676 CYB5BO43169 146 aa11.7□□□□□ -0.54
HERPUD1-215ENST00000568676 AREGP15514 252 aa11.7□□□□□ -0.54
HERPUD1-215ENST00000568676 RPL30P62888 115 aaKnown RBP11.7□□□□□ -0.54
HERPUD1-215ENST00000568676 FABP5Q01469 135 aa11.7□□□□□ -0.54
HERPUD1-215ENST00000568676 PLA2G7Q13093 441 aa11.7□□□□□ -0.54
HERPUD1-215ENST00000568676 DEFB135Q30KP9 77 aa11.7□□□□□ -0.54
HERPUD1-215ENST00000568676 OR2B11Q5JQS5 317 aa11.7□□□□□ -0.54
HERPUD1-215ENST00000568676 TCTEX1D2Q8WW35 142 aa11.7□□□□□ -0.54
HERPUD1-215ENST00000568676 BET1LQ9NYM9 111 aa11.7□□□□□ -0.54
HERPUD1-215ENST00000568676 IGKV1D-8A0A087WSZ0 117 aa11.69□□□□□ -0.54
HERPUD1-215ENST00000568676 IGLV2-14P01704 120 aa11.69□□□□□ -0.54
HERPUD1-215ENST00000568676 FGF2P09038 288 aa11.69□□□□□ -0.54
HERPUD1-215ENST00000568676 HLA-GP17693 338 aa11.69□□□□□ -0.54
HERPUD1-215ENST00000568676 CRHBPP24387 322 aa11.69□□□□□ -0.54
HERPUD1-215ENST00000568676 PTBP1P26599 531 aaKnown RBP eCLIP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms