RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-223ENST00000568499 OR4A47Q6IF82 309 aa11.81□□□□□ -0.52
KLHDC4-223ENST00000568499 PLET1Q6UQ28 207 aa11.81□□□□□ -0.52
KLHDC4-223ENST00000568499 PUSL1Q8N0Z8 303 aaKnown RBP11.81□□□□□ -0.52
KLHDC4-223ENST00000568499 LGI3Q8N145 548 aa11.81□□□□□ -0.52
KLHDC4-223ENST00000568499 TMEM167AQ8TBQ9 72 aa11.81□□□□□ -0.52
KLHDC4-223ENST00000568499 GLYATL2Q8WU03 294 aa11.81□□□□□ -0.52
KLHDC4-223ENST00000568499 RBPMSQ93062 196 aaKnown RBP11.81□□□□□ -0.52
KLHDC4-223ENST00000568499 IL22RA2Q969J5 263 aa11.81□□□□□ -0.52
KLHDC4-223ENST00000568499 ALX4Q9H161 411 aaPredicted RBP11.81□□□□□ -0.52
KLHDC4-223ENST00000568499 TMEM140Q9NV12 185 aa11.81□□□□□ -0.52
KLHDC4-223ENST00000568499 NUDT15Q9NV35 164 aa11.81□□□□□ -0.52
KLHDC4-223ENST00000568499 FLVCR2Q9UPI3 526 aa11.81□□□□□ -0.52
KLHDC4-223ENST00000568499 RNF114Q9Y508 228 aa11.81□□□□□ -0.52
KLHDC4-223ENST00000568499 MMP24Q9Y5R2 645 aa11.81□□□□□ -0.52
KLHDC4-223ENST00000568499 CUBNO60494 3623 aa11.8□□□□□ -0.52
KLHDC4-223ENST00000568499 SFT2D2O95562 160 aa11.8□□□□□ -0.52
KLHDC4-223ENST00000568499 CA2P00918 260 aa11.8□□□□□ -0.52
KLHDC4-223ENST00000568499 OR4E1P0C645 316 aa11.8□□□□□ -0.52
KLHDC4-223ENST00000568499 ANXA7P20073 488 aaKnown RBP11.8□□□□□ -0.52
KLHDC4-223ENST00000568499 RPL8P62917 257 aaKnown RBP11.8□□□□□ -0.52
KLHDC4-223ENST00000568499 CX3CL1P78423 397 aa11.8□□□□□ -0.52
KLHDC4-223ENST00000568499 TMEM267Q0VDI3 215 aaPredicted RBP11.8□□□□□ -0.52
KLHDC4-223ENST00000568499 NRARPQ7Z6K4 114 aa11.8□□□□□ -0.52
KLHDC4-223ENST00000568499 DUSP18Q8NEJ0 188 aa11.8□□□□□ -0.52
KLHDC4-223ENST00000568499 LINC01006Q8NI28 216 aa11.8□□□□□ -0.52
KLHDC4-223ENST00000568499 CHPT1Q8WUD6 406 aa11.8□□□□□ -0.52
KLHDC4-223ENST00000568499 TMEM56Q96MV1 263 aa11.8□□□□□ -0.52
KLHDC4-223ENST00000568499 OR51J1Q9H342 316 aa11.8□□□□□ -0.52
KLHDC4-223ENST00000568499 PARP11Q9NR21 331 aa11.8□□□□□ -0.52
KLHDC4-223ENST00000568499 FKBP11Q9NYL4 201 aa11.8□□□□□ -0.52
KLHDC4-223ENST00000568499 TMEM56-RWDD3S4R434 201 aa11.8□□□□□ -0.52
KLHDC4-223ENST00000568499 IGHV7-81A0A0B4J1V7 117 aa11.79□□□□□ -0.52
KLHDC4-223ENST00000568499 FCN1O00602 326 aa11.79□□□□□ -0.52
KLHDC4-223ENST00000568499 RBMXL2O75526 392 aaKnown RBP11.79□□□□□ -0.52
KLHDC4-223ENST00000568499 PTTG1O95997 202 aa11.79□□□□□ -0.52
KLHDC4-223ENST00000568499 HLA-AP01891 365 aaKnown RBP11.79□□□□□ -0.52
KLHDC4-223ENST00000568499 FGF2P09038 288 aa11.79□□□□□ -0.52
KLHDC4-223ENST00000568499 VDAC1P21796 283 aa11.79□□□□□ -0.52
KLHDC4-223ENST00000568499 SUPT4H1P63272 117 aaKnown RBP11.79□□□□□ -0.52
KLHDC4-223ENST00000568499 SLC35B1P78383 322 aa11.79□□□□□ -0.52
KLHDC4-223ENST00000568499 PPP1R1AQ13522 171 aa11.79□□□□□ -0.52
KLHDC4-223ENST00000568499 TMEM187Q14656 261 aa11.79□□□□□ -0.52
KLHDC4-223ENST00000568499 FXYD3Q14802 87 aa11.79□□□□□ -0.52
KLHDC4-223ENST00000568499 TNXAQ16473 311 aa11.79□□□□□ -0.52
KLHDC4-223ENST00000568499 TMEM268Q5VZI3 342 aa11.79□□□□□ -0.52
KLHDC4-223ENST00000568499 CENPVQ7Z7K6 275 aaPredicted RBP11.79□□□□□ -0.52
KLHDC4-223ENST00000568499 FAM219AQ8IW50 185 aa11.79□□□□□ -0.52
KLHDC4-223ENST00000568499 OR4A16Q8NH70 328 aa11.79□□□□□ -0.52
KLHDC4-223ENST00000568499 COQ8AQ8NI60 647 aa11.79□□□□□ -0.52
KLHDC4-223ENST00000568499 CASTOR1Q8WTX7 329 aa11.79□□□□□ -0.52
KLHDC4-223ENST00000568499 ARPC1AQ92747 370 aa11.79□□□□□ -0.52
KLHDC4-223ENST00000568499 SEC22AQ96IW7 307 aa11.79□□□□□ -0.52
KLHDC4-223ENST00000568499 COMMD5Q9GZQ3 224 aa11.79□□□□□ -0.52
KLHDC4-223ENST00000568499 ZNF430Q9H8G1 570 aaPredicted RBP11.79□□□□□ -0.52
KLHDC4-223ENST00000568499 DUXBA0A1W2PPF3 345 aa11.78□□□□□ -0.52
KLHDC4-223ENST00000568499 C9orf170A2RU37 121 aa11.78□□□□□ -0.52
KLHDC4-223ENST00000568499 HAX1O00165 279 aa11.78□□□□□ -0.52
KLHDC4-223ENST00000568499 UPK2O00526 184 aa11.78□□□□□ -0.52
KLHDC4-223ENST00000568499 HLA-GP17693 338 aa11.78□□□□□ -0.52
KLHDC4-223ENST00000568499 MDKP21741 143 aaPredicted RBP11.78□□□□□ -0.52
KLHDC4-223ENST00000568499 Q6ZS46 218 aa11.78□□□□□ -0.52
KLHDC4-223ENST00000568499 LYG2Q86SG7 212 aa11.78□□□□□ -0.52
KLHDC4-223ENST00000568499 SELENOHQ8IZQ5 122 aaKnown RBP11.78□□□□□ -0.52
KLHDC4-223ENST00000568499 TAF15Q92804 592 aaKnown RBP eCLIP11.78□□□□□ -0.52
KLHDC4-223ENST00000568499 TMEM68Q96MH6 324 aa11.78□□□□□ -0.52
KLHDC4-223ENST00000568499 PHB2Q99623 299 aa11.78□□□□□ -0.52
KLHDC4-223ENST00000568499 SPIN2AQ99865 258 aa11.78□□□□□ -0.52
KLHDC4-223ENST00000568499 SPIN2BQ9BPZ2 258 aa11.78□□□□□ -0.52
KLHDC4-223ENST00000568499 HSPB9Q9BQS6 159 aa11.78□□□□□ -0.52
KLHDC4-223ENST00000568499 GPN1Q9HCN4 374 aaPredicted RBP11.78□□□□□ -0.52
KLHDC4-223ENST00000568499 TPSG1Q9NRR2 321 aa11.78□□□□□ -0.52
KLHDC4-223ENST00000568499 PRNDQ9UKY0 176 aa11.78□□□□□ -0.52
KLHDC4-223ENST00000568499 ATRQ13535 2644 aa11.78□□□□□ -0.52
KLHDC4-223ENST00000568499 DUS4LO95620 317 aaKnown RBP11.77□□□□□ -0.53
KLHDC4-223ENST00000568499 DHFRP00374 187 aa11.77□□□□□ -0.53
KLHDC4-223ENST00000568499 IGKV1-39P01597 117 aa11.77□□□□□ -0.53
KLHDC4-223ENST00000568499 IGKV1D-39P04432 117 aa11.77□□□□□ -0.53
KLHDC4-223ENST00000568499 IGF1P05019 195 aa11.77□□□□□ -0.53
KLHDC4-223ENST00000568499 COMPP49747 757 aaPredicted RBP11.77□□□□□ -0.53
KLHDC4-223ENST00000568499 PJVKQ0ZLH3 352 aa11.77□□□□□ -0.53
KLHDC4-223ENST00000568499 DHRS2Q13268 280 aa11.77□□□□□ -0.53
KLHDC4-223ENST00000568499 RGS21Q2M5E4 152 aa11.77□□□□□ -0.53
KLHDC4-223ENST00000568499 KRTAP21-3Q3LHN1 58 aa11.77□□□□□ -0.53
KLHDC4-223ENST00000568499 AWAT1Q58HT5 328 aa11.77□□□□□ -0.53
KLHDC4-223ENST00000568499 C12orf54Q6X4T0 127 aa11.77□□□□□ -0.53
KLHDC4-223ENST00000568499 GRPEL2Q8TAA5 225 aa11.77□□□□□ -0.53
KLHDC4-223ENST00000568499 LSM10Q969L4 123 aaKnown RBP11.77□□□□□ -0.53
KLHDC4-223ENST00000568499 SERTAD4Q9NUC0 356 aa11.77□□□□□ -0.53
KLHDC4-223ENST00000568499 CACFD1Q9UGQ2 172 aa11.77□□□□□ -0.53
KLHDC4-223ENST00000568499 ZNF580Q9UK33 172 aa11.77□□□□□ -0.53
KLHDC4-223ENST00000568499 A0A0B4J2A0 478 aa11.76□□□□□ -0.53
KLHDC4-223ENST00000568499 INMT-MINDY4F8WBC2 141 aa11.76□□□□□ -0.53
KLHDC4-223ENST00000568499 ATP6V0E1O15342 81 aa11.76□□□□□ -0.53
KLHDC4-223ENST00000568499 PRAF2O60831 178 aa11.76□□□□□ -0.53
KLHDC4-223ENST00000568499 RPL27AP46776 148 aaKnown RBP11.76□□□□□ -0.53
KLHDC4-223ENST00000568499 MECP2P51608 486 aaKnown RBP11.76□□□□□ -0.53
KLHDC4-223ENST00000568499 MRPL41Q8IXM3 137 aaKnown RBP11.76□□□□□ -0.53
KLHDC4-223ENST00000568499 STPG2Q8N412 459 aa11.76□□□□□ -0.53
KLHDC4-223ENST00000568499 LRTM2Q8N967 370 aa11.76□□□□□ -0.53
KLHDC4-223ENST00000568499 SGMS2Q8NHU3 365 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms