RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 SMIM30A4D0T7 59 aa14.21□□□□□ -0.13
LINC01238-205ENST00000567549 OR10A3P58181 314 aa14.21□□□□□ -0.13
LINC01238-205ENST00000567549 SSBP2P81877 361 aaPredicted RBP14.21□□□□□ -0.13
LINC01238-205ENST00000567549 DYRK1AQ13627 763 aa14.21□□□□□ -0.13
LINC01238-205ENST00000567549 EXOSC2Q13868 293 aaKnown RBP14.21□□□□□ -0.13
LINC01238-205ENST00000567549 HACD4Q5VWC8 232 aa14.21□□□□□ -0.13
LINC01238-205ENST00000567549 Q8N1Y9 231 aa14.21□□□□□ -0.13
LINC01238-205ENST00000567549 OR4S2Q8NH73 311 aa14.21□□□□□ -0.13
LINC01238-205ENST00000567549 MAFIPQ8WZ33 124 aa14.21□□□□□ -0.13
LINC01238-205ENST00000567549 SLC2A8Q9NY64 477 aa14.21□□□□□ -0.13
LINC01238-205ENST00000567549 PTBP1P26599 531 aaKnown RBP eCLIP14.2□□□□□ -0.14
LINC01238-205ENST00000567549 MAS1LP35410 378 aa14.2□□□□□ -0.14
LINC01238-205ENST00000567549 SCAND1P57086 179 aa14.2□□□□□ -0.14
LINC01238-205ENST00000567549 GNG2P59768 71 aa14.2□□□□□ -0.14
LINC01238-205ENST00000567549 RHOGP84095 191 aa14.2□□□□□ -0.14
LINC01238-205ENST00000567549 CDNFQ49AH0 187 aa14.2□□□□□ -0.14
LINC01238-205ENST00000567549 CNIH2Q6PI25 160 aa14.2□□□□□ -0.14
LINC01238-205ENST00000567549 NR2C2APQ86WQ0 139 aa14.2□□□□□ -0.14
LINC01238-205ENST00000567549 DYNLRB2Q8TF09 96 aa14.2□□□□□ -0.14
LINC01238-205ENST00000567549 ST6GALNAC5Q9BVH7 336 aa14.2□□□□□ -0.14
LINC01238-205ENST00000567549 ZNF257Q9Y2Q1 563 aa14.2□□□□□ -0.14
LINC01238-205ENST00000567549 SRRM4A7MD48 611 aaKnown RBP14.19□□□□□ -0.14
LINC01238-205ENST00000567549 FCGR3BO75015 233 aa14.19□□□□□ -0.14
LINC01238-205ENST00000567549 SAA1P0DJI8 122 aaPredicted RBP14.19□□□□□ -0.14
LINC01238-205ENST00000567549 KIR2DS2P43631 304 aa14.19□□□□□ -0.14
LINC01238-205ENST00000567549 HAPLN4Q86UW8 402 aa14.19□□□□□ -0.14
LINC01238-205ENST00000567549 TTC9CQ8N5M4 171 aa14.19□□□□□ -0.14
LINC01238-205ENST00000567549 DIRAS2Q96HU8 199 aa14.19□□□□□ -0.14
LINC01238-205ENST00000567549 MIXL1Q9H2W2 232 aa14.19□□□□□ -0.14
LINC01238-205ENST00000567549 ZNF430Q9H8G1 570 aaPredicted RBP14.19□□□□□ -0.14
LINC01238-205ENST00000567549 SPATA2Q9UM82 520 aa14.19□□□□□ -0.14
LINC01238-205ENST00000567549 RBMX2Q9Y388 322 aaKnown RBP14.19□□□□□ -0.14
LINC01238-205ENST00000567549 TRBV9A0A0B4J1U6 114 aa14.18□□□□□ -0.14
LINC01238-205ENST00000567549 FABP12A6NFH5 140 aa14.18□□□□□ -0.14
LINC01238-205ENST00000567549 LINC00473A8K010 186 aa14.18□□□□□ -0.14
LINC01238-205ENST00000567549 HPGDSO60760 199 aa14.18□□□□□ -0.14
LINC01238-205ENST00000567549 TPPPO94811 219 aa14.18□□□□□ -0.14
LINC01238-205ENST00000567549 HRASP01112 189 aa14.18□□□□□ -0.14
LINC01238-205ENST00000567549 HLA-DQB1P01920 261 aa14.18□□□□□ -0.14
LINC01238-205ENST00000567549 PLA2G7Q13093 441 aa14.18□□□□□ -0.14
LINC01238-205ENST00000567549 IDO2Q6ZQW0 420 aa14.18□□□□□ -0.14
LINC01238-205ENST00000567549 RABL2AQ9UBK7 228 aaPredicted RBP14.18□□□□□ -0.14
LINC01238-205ENST00000567549 RABL2BQ9UNT1 228 aa14.18□□□□□ -0.14
LINC01238-205ENST00000567549 TNCP24821 2201 aa14.17□□□□□ -0.14
LINC01238-205ENST00000567549 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.17□□□□□ -0.14
LINC01238-205ENST00000567549 J3QRK9 145 aa14.17□□□□□ -0.14
LINC01238-205ENST00000567549 APOA1P02647 267 aa14.17□□□□□ -0.14
LINC01238-205ENST00000567549 CSN3P07498 182 aa14.17□□□□□ -0.14
LINC01238-205ENST00000567549 APELAP0DMC3 54 aa14.17□□□□□ -0.14
LINC01238-205ENST00000567549 ARPC4P59998 168 aa14.17□□□□□ -0.14
LINC01238-205ENST00000567549 IL34Q6ZMJ4 242 aa14.17□□□□□ -0.14
LINC01238-205ENST00000567549 ZNF66Q6ZN08 573 aa14.17□□□□□ -0.14
LINC01238-205ENST00000567549 TCTEX1D2Q8WW35 142 aa14.17□□□□□ -0.14
LINC01238-205ENST00000567549 OR2A7Q96R45 310 aa14.17□□□□□ -0.14
LINC01238-205ENST00000567549 CCDC32Q9BV29 185 aa14.17□□□□□ -0.14
LINC01238-205ENST00000567549 TECRQ9NZ01 308 aaKnown RBP14.17□□□□□ -0.14
LINC01238-205ENST00000567549 ETV7Q9Y603 341 aa14.17□□□□□ -0.14
LINC01238-205ENST00000567549 FAM25AB3EWG3 89 aa14.16□□□□□ -0.14
LINC01238-205ENST00000567549 FAM25CB3EWG5 89 aa14.16□□□□□ -0.14
LINC01238-205ENST00000567549 FAM25GB3EWG6 89 aa14.16□□□□□ -0.14
LINC01238-205ENST00000567549 GGCTO75223 188 aaKnown RBP14.16□□□□□ -0.14
LINC01238-205ENST00000567549 KBTBD11O94819 623 aa14.16□□□□□ -0.14
LINC01238-205ENST00000567549 HIST1H1BP16401 226 aaKnown RBP14.16□□□□□ -0.14
LINC01238-205ENST00000567549 MSMO1Q15800 293 aa14.16□□□□□ -0.14
LINC01238-205ENST00000567549 SAMD12Q8N8I0 201 aa14.16□□□□□ -0.14
LINC01238-205ENST00000567549 C5orf30Q96GV9 206 aa14.16□□□□□ -0.14
LINC01238-205ENST00000567549 SOSTQ9BQB4 213 aa14.16□□□□□ -0.14
LINC01238-205ENST00000567549 ANXA10Q9UJ72 324 aa14.16□□□□□ -0.14
LINC01238-205ENST00000567549 NPIPB5A8MRT5 1133 aa14.15□□□□□ -0.14
LINC01238-205ENST00000567549 CYB5BO43169 146 aa14.15□□□□□ -0.14
LINC01238-205ENST00000567549 RPL27AP46776 148 aaKnown RBP14.15□□□□□ -0.14
LINC01238-205ENST00000567549 HAGHQ16775 308 aa14.15□□□□□ -0.14
LINC01238-205ENST00000567549 C15orf32Q32M92 178 aa14.15□□□□□ -0.14
LINC01238-205ENST00000567549 GDPD1Q8N9F7 314 aa14.15□□□□□ -0.14
LINC01238-205ENST00000567549 ZBTB34Q8NCN2 500 aa14.15□□□□□ -0.14
LINC01238-205ENST00000567549 OR4A5Q8NH83 315 aa14.15□□□□□ -0.14
LINC01238-205ENST00000567549 RYR3Q15413 4870 aa14.15□□□□□ -0.14
LINC01238-205ENST00000567549 A0A0A6YYH2 397 aa14.14□□□□□ -0.15
LINC01238-205ENST00000567549 A6NJ64 397 aa14.14□□□□□ -0.15
LINC01238-205ENST00000567549 UPK1BO75841 260 aa14.14□□□□□ -0.15
LINC01238-205ENST00000567549 TRBV12-3P01733 135 aa14.14□□□□□ -0.15
LINC01238-205ENST00000567549 SNRPBP14678 240 aaKnown RBP14.14□□□□□ -0.15
LINC01238-205ENST00000567549 ELK1P19419 428 aa14.14□□□□□ -0.15
LINC01238-205ENST00000567549 NFYAP23511 347 aaPredicted RBP14.14□□□□□ -0.15
LINC01238-205ENST00000567549 CD81P60033 236 aa14.14□□□□□ -0.15
LINC01238-205ENST00000567549 CATR1Q13166 79 aa14.14□□□□□ -0.15
LINC01238-205ENST00000567549 MRGPRG-AS1Q2M3A8 158 aa14.14□□□□□ -0.15
LINC01238-205ENST00000567549 FAM106AQ4KMX7 169 aa14.14□□□□□ -0.15
LINC01238-205ENST00000567549 UBE2NLQ5JXB2 153 aa14.14□□□□□ -0.15
LINC01238-205ENST00000567549 OR4A47Q6IF82 309 aa14.14□□□□□ -0.15
LINC01238-205ENST00000567549 SLC16A13Q7RTY0 426 aa14.14□□□□□ -0.15
LINC01238-205ENST00000567549 TMEM167AQ8TBQ9 72 aa14.14□□□□□ -0.15
LINC01238-205ENST00000567549 EDA2RQ9HAV5 297 aa14.14□□□□□ -0.15
LINC01238-205ENST00000567549 V9GYH0 126 aa14.14□□□□□ -0.15
LINC01238-205ENST00000567549 LCE6AA0A183 80 aa14.13□□□□□ -0.15
LINC01238-205ENST00000567549 TMEM235A6NFC5 223 aa14.13□□□□□ -0.15
LINC01238-205ENST00000567549 LGALS9O00182 355 aa14.13□□□□□ -0.15
LINC01238-205ENST00000567549 BMPR1BO00238 502 aa14.13□□□□□ -0.15
LINC01238-205ENST00000567549 DEFA4P12838 97 aa14.13□□□□□ -0.15
LINC01238-205ENST00000567549 DEFA5Q01523 94 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms